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3A0T
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BU of 3a0t by Molmil
Catalytic domain of histidine kinase ThkA (TM1359) in complex with ADP and Mg ion (trigonal)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Sensor protein
Authors:Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y.
Deposit date:2009-03-24
Release date:2009-10-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure of PAS-linked histidine kinase and the response regulator complex
Structure, 17, 2009
3A0Z
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BU of 3a0z by Molmil
Catalytic domain of histidine kinase ThkA (TM1359) (nucleotide free form 4: isopropanol, orthorombic)
Descriptor: Sensor protein
Authors:Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y.
Deposit date:2009-03-25
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of PAS-linked histidine kinase and the response regulator complex
Structure, 17, 2009
3C0E
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BU of 3c0e by Molmil
Yeast Hsp82 N-terminal domain: effects of mutants 98-99 KS-AA
Descriptor: ATP-dependent molecular chaperone HSP82
Authors:Immormino, R.M, Gewirth, D.T.
Deposit date:2008-01-19
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of GRP94 with the Specific Mutation KS168-169AA with Bound Geldanamycin
To be Published
3C11
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BU of 3c11 by Molmil
Yeast Hsp82 N-terminal domain-Geldanamycin complex: effects of mutants 98-99 KS-AA
Descriptor: ATP-dependent molecular chaperone HSP82, GELDANAMYCIN, GLYCEROL
Authors:Immormino, R.M, Gewirth, D.T.
Deposit date:2008-01-21
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of GRP94 with the Specific Mutation KS168-169AA with Bound Geldanamycin
To be Published
3CGY
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BU of 3cgy by Molmil
Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain in complex with radicicol
Descriptor: RADICICOL, Virulence sensor histidine kinase phoQ
Authors:Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
Deposit date:2008-03-06
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
3CGZ
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BU of 3cgz by Molmil
Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain
Descriptor: Virulence sensor histidine kinase phoQ
Authors:Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
Deposit date:2008-03-06
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
3EHG
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BU of 3ehg by Molmil
Crystal structure of the ATP-binding domain of DesK in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, IODIDE ION, MAGNESIUM ION, ...
Authors:Trajtenberg, F, Buschiazzo, A.
Deposit date:2008-09-12
Release date:2009-09-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural and enzymatic insights into the ATP binding and autophosphorylation mechanism of a sensor histidine kinase
J.Biol.Chem., 285, 2010
4KFG
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BU of 4kfg by Molmil
The DNA Gyrase B ATP binding domain of Escherichia coli in complex with a small molecule inhibitor.
Descriptor: 6-fluoro-4-[(3aR,6aR)-hexahydropyrrolo[3,4-b]pyrrol-5(1H)-yl]-N-methyl-2-[(2-methylpyrimidin-5-yl)oxy]-9H-pyrimido[4,5-b]indol-8-amine, DNA gyrase subunit B, SULFATE ION
Authors:Bensen, D.C, Akers-Rodriguez, S, Lam, T, Tari, L.W.
Deposit date:2013-04-26
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A new class of type IIA topoisomerase inhibitors with broad-spectrum antibacterial activity
To be Published
5Z9E
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BU of 5z9e by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, DNA gyrase subunit B, PHOSPHATE ION, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-02
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5Z9N
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BU of 5z9n by Molmil
S.aureus GyrB ATPase domain in complex with 4,6-dichloro-2-(methylthio)pyrimidine
Descriptor: 4,6-dichloro-2-(methylsulfanyl)pyrimidine, DNA gyrase subunit B, SULFATE ION
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-03
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
4LP0
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BU of 4lp0 by Molmil
Crystal structure of a topoisomerase ATP inhibitor
Descriptor: 6'-[(ethylcarbamoyl)amino]-4'-[4-(trifluoromethyl)-1,3-thiazol-2-yl]-3,3'-bipyridine-5-carboxylic acid, Topoisomerase IV subunit B
Authors:Basarab, G.S, Manchester, J.I, Bist, S, Boriack-Sjodin, P.A, Dangel, B, Illingsworth, R, Uria-Nickelsen, M, Sherer, B.A, Sriram, S, Eakin, A.E.
Deposit date:2013-07-14
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fragment-to-Hit-to-Lead Discovery of a Novel Pyridylurea Scaffold of ATP Competitive Dual Targeting Type II Topoisomerase Inhibiting Antibacterial Agents.
J.Med.Chem., 56, 2013
5Z9F
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BU of 5z9f by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, 2-hydroxybenzonitrile, DNA gyrase subunit B, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-03
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5Z9L
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BU of 5z9l by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, 2-fluoro-4-hydroxybenzonitrile, DNA gyrase subunit B, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-03
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5Z9Q
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BU of 5z9q by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, 5-phenyl-1H-pyrazol-3-amine, DNA gyrase subunit B, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-04
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
4LPB
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BU of 4lpb by Molmil
Crystal structure of a topoisomerase ATPase inhibitor
Descriptor: 1-ethyl-3-{5'-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)-4-[4-(trifluoromethyl)-1,3-thiazol-2-yl]-3,3'-bipyridin-6-yl}urea, Topoisomerase IV subunit B
Authors:Boriack-Sjodin, A.
Deposit date:2013-07-15
Release date:2013-10-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Fragment-to-Hit-to-Lead Discovery of a Novel Pyridylurea Scaffold of ATP Competitive Dual Targeting Type II Topoisomerase Inhibiting Antibacterial Agents.
J.Med.Chem., 56, 2013
5Z4O
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BU of 5z4o by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, 4-phenoxyphenol, DNA gyrase subunit B, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-01-12
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5Z9B
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BU of 5z9b by Molmil
Bacterial GyrB ATPase domain in complex with (3,4-dichlorophenyl)hydrazine
Descriptor: (3,4-dichlorophenyl)hydrazine, 1H-benzimidazol-2-amine, DNA gyrase subunit B, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-02
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5Z9M
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BU of 5z9m by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1-benzofuran-2-carboxylic acid, DNA gyrase subunit B, SULFATE ION
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-03
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5Z4H
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BU of 5z4h by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, 4-(4-hydroxyphenyl)sulfanylphenol, DNA gyrase subunit B, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-01-11
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5Z9P
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BU of 5z9p by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, DNA gyrase subunit B, MAGNESIUM ION
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-04
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
4MOT
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BU of 4mot by Molmil
Structure of Streptococcus pneumonia pare in complex with AZ13072886
Descriptor: 1-[4-(3-methylbutyl)-5-oxo-6-(pyridin-3-yl)-4,5-dihydro[1,3]thiazolo[5,4-b]pyridin-2-yl]-3-prop-2-en-1-ylurea, Topoisomerase IV subunit B
Authors:Ogg, D, Boriack-Sjodin, P.A.
Deposit date:2013-09-12
Release date:2013-11-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Thiazolopyridone ureas as DNA gyrase B inhibitors: Optimization of antitubercular activity and efficacy.
Bioorg.Med.Chem.Lett., 24, 2014
6BLK
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BU of 6blk by Molmil
Mycobacterial sensor histidine kinase MprB
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Signal transduction histidine-protein kinase/phosphatase mprB
Authors:Li, J, Korotkova, N, Korotkov, K.V.
Deposit date:2017-11-10
Release date:2017-11-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.552 Å)
Cite:Mycobacterial sensor histidine kinase MprB
to be published
6CJI
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BU of 6cji by Molmil
Candida albicans Hsp90 nucleotide binding domain
Descriptor: 1,2-ETHANEDIOL, Heat shock protein 90 homolog
Authors:Hutchinson, A, Loppnau, P, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Hui, R, STRUCTURAL GENOMICS CONSORTIUM, S.G.C, Pizarro, J.C, Structural Genomics Consortium (SGC)
Deposit date:2018-02-26
Release date:2019-01-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural basis for species-selective targeting of Hsp90 in a pathogenic fungus.
Nat Commun, 10, 2019
6CJR
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BU of 6cjr by Molmil
Candida albicans Hsp90 nucleotide binding domain in complex with SNX-2112
Descriptor: 1,2-ETHANEDIOL, 4-[6,6-dimethyl-4-oxidanylidene-3-(trifluoromethyl)-5,7-dihydroindazol-1-yl]-2-[(4-oxidanylcyclohexyl)amino]benzamide, Heat shock protein 90 homolog
Authors:Kirkpatrick, M.G, Pizarro, J.C.
Deposit date:2018-02-26
Release date:2019-01-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for species-selective targeting of Hsp90 in a pathogenic fungus.
Nat Commun, 10, 2019
4P8O
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S. aureus gyrase bound to an aminobenzimidazole urea inhibitor
Descriptor: 1-ethyl-3-[5-(5-fluoropyridin-3-yl)-7-(pyrimidin-2-yl)-1H-benzimidazol-2-yl]urea, DNA gyrase subunit B
Authors:Jacobs, M.D.
Deposit date:2014-03-31
Release date:2014-10-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Second-generation antibacterial benzimidazole ureas: discovery of a preclinical candidate with reduced metabolic liability.
J.Med.Chem., 57, 2014

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