PDB: 173 件ウェブページステータス検索Chemie searchBIRD

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6GBL	Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions 分子名称: 1,2-ETHANEDIOL, CACODYLATE ION, FORMIC ACID, ... 著者 Khersonsky, O, Lipsh, R, Avizemer, Z, Goldsmith, M, Ashani, Y, Leader, H, Dym, O, Rogotner, S, Trudeau, D, Tawfik, D.S, Fleishman, S.J. 登録日 2018-04-15 公開日 2018-10-24 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Automated Design of Efficient and Functionally Diverse Enzyme Repertoires. Mol. Cell, 72, 2018
6GBK	Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, Parathion hydrolase, ... 著者 Khersonsky, O, Lipsh, R, Avizemer, Z, Goldsmith, M, Ashani, Y, Leader, H, Dym, O, Rogotner, S, Trudeau, D, Tawfik, D.S, Fleishman, S.J. 登録日 2018-04-15 公開日 2018-10-24 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Automated Design of Efficient and Functionally Diverse Enzyme Repertoires. Mol. Cell, 72, 2018
1EZ2	THREE-DIMENSIONAL STRUCTURE OF THE ZINC-CONTAINING PHOSPHOTRIESTERASE WITH BOUND SUBSTRATE ANALOG DIISOPROPYLMETHYL PHOSPHONATE. 分子名称: METHYLPHOSPHONIC ACID DIISOPROPYL ESTER, PHOSPHOTRIESTERASE, ZINC ION 著者 Holden, H.M, Benning, M.M, Raushel, F.M, Hong, S.-B. 登録日 2000-05-09 公開日 2000-12-20 最終更新日 2017-10-04 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The binding of substrate analogs to phosphotriesterase. J.Biol.Chem., 275, 2000
6FU6	Phosphotriesterase PTE_C23_2 分子名称: FORMIC ACID, POLYACRYLIC ACID, Parathion hydrolase, ... 著者 Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J. 登録日 2018-02-26 公開日 2019-03-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Phosphotriesterase PTE_A53_4 To Be Published
6G3M	Phosphotriesterase PTE_C23M_4 分子名称: 1-ethyl-1-methyl-cyclohexane, CHLORIDE ION, FORMIC ACID, ... 著者 Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J. 登録日 2018-03-26 公開日 2019-04-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.665 Å) 主引用文献 Phosphotriesterase PTE_C23M_4 To Be Published
6GBJ	Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions 分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Parathion hydrolase, ... 著者 Khersonsky, O, Lipsh, R, Avizemer, Z, Goldsmith, M, Ashani, Y, Leader, H, Dym, O, Rogotner, S, Trudeau, D, Tawfik, D.S, Fleishman, S.J. 登録日 2018-04-15 公開日 2018-10-24 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Automated Design of Efficient and Functionally Diverse Enzyme Repertoires. Mol. Cell, 72, 2018
1HZY	HIGH RESOLUTION STRUCTURE OF THE ZINC-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA 分子名称: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, FORMIC ACID, ... 著者 Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H. 登録日 2001-01-26 公開日 2001-04-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta. Biochemistry, 40, 2001
1I0B	HIGH RESOLUTION STRUCTURE OF THE MANGANESE-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA 分子名称: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, FORMIC ACID, ... 著者 Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H. 登録日 2001-01-29 公開日 2001-04-04 最終更新日 2019-11-20 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta. Biochemistry, 40, 2001
1I0D	HIGH RESOLUTION STRUCTURE OF THE ZINC/CADMIUM-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA 分子名称: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, CADMIUM ION, ... 著者 Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H. 登録日 2001-01-29 公開日 2001-04-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta. Biochemistry, 40, 2001
1JGM	High Resolution Structure of the Cadmium-containing Phosphotriesterase from Pseudomonas diminuta 分子名称: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, CADMIUM ION, ... 著者 Benning, M.M, Shim, H, Raushel, F.M, Holden, H.M. 登録日 2001-06-26 公開日 2001-07-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta. Biochemistry, 40, 2001
6FFW	Phosphotriesterase PTE_A53_5 分子名称: (4~{S},6~{R})-2,2,6-trimethyl-1,3-dioxan-4-ol, 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ... 著者 Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J. 登録日 2018-01-09 公開日 2019-03-13 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.495 Å) 主引用文献 Phosphotriesterase PTE_A53_5 To Be Published
6FQE	Phosphotriesterase PTE_A53_4 分子名称: (4~{S},6~{R})-2,2,6-trimethyl-1,3-dioxan-4-ol, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ... 著者 Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J. 登録日 2018-02-14 公開日 2019-03-13 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Phosphotriesterase PTE_A53_4 To Be Published
6FS3	Phosphotriesterase PTE_A53_1 分子名称: (2~{S})-2-methylpentanedioic acid, FORMIC ACID, Parathion hydrolase, ... 著者 Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J. 登録日 2018-02-19 公開日 2019-03-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structures of Bacterail Phosphotriesterase variant with high catalytic activity towards organophosphate nerve agents developed by use of structure-based design and molecular evolution To Be Published
6G1J	Phosphotriesterase PTE_C23M_1 分子名称: 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, GLYCEROL, ... 著者 Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J. 登録日 2018-03-21 公開日 2019-04-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Phosphotriesterase PTE_C23M_1 To Be Published
6FWE	Phosphotriesterase PTE_C23_6 分子名称: 1-[methoxy(methyl)phosphoryl]oxyethane, 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, ... 著者 Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J. 登録日 2018-03-06 公開日 2019-03-27 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.774 Å) 主引用文献 Phosphotriesterase PTE_C23_6 To Be Published
6FRZ	Phosphotriesterase PTE_A53_7 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-methylcyclohexane-1,1,3,3-tetrol, DI(HYDROXYETHYL)ETHER, ... 著者 Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J. 登録日 2018-02-18 公開日 2019-03-13 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Phosphotriesterase PTE_A53_7 To Be Published
2R1L	OpdA from Agrobacterium radiobacter with bound diethyl thiophosphate from crystal soaking with the compound- 1.95 A 分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, FE (II) ION, ... 著者 Ollis, D.L, Jackson, C.J, Foo, J.L, Kim, H.K, Carr, P.D, Liu, J.W, Salem, G. 登録日 2007-08-23 公開日 2008-02-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 In crystallo capture of a Michaelis complex and product-binding modes of a bacterial phosphotriesterase J.Mol.Biol., 375, 2008
3K2G	Crystal structure of a Resiniferatoxin-binding protein from Rhodobacter sphaeroides 分子名称: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, MAGNESIUM ION, Resiniferatoxin-binding, ... 著者 Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2009-09-30 公開日 2009-10-13 最終更新日 2021-02-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a Resiniferatoxin-binding protein from Rhodobacter sphaeroides To be Published
2R1N	OpdA from Agrobacterium radiobacter with bound slow substrate diethyl 4-methoxyphenyl phosphate (20h)- 1.7 A 分子名称: COBALT (II) ION, DIETHYL 4-METHOXYPHENYL PHOSPHATE, FE (II) ION, ... 著者 Ollis, D.L, Jackson, C.J, Foo, J.L, Kim, H.K, Carr, P.D, Liu, J.W, Salem, G. 登録日 2007-08-23 公開日 2008-02-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 In crystallo capture of a Michaelis complex and product-binding modes of a bacterial phosphotriesterase J.Mol.Biol., 375, 2008
2R1P	OpdA from Agrobacterium radiobacter with bound product diethyl thiophosphate from co-crystallisation with tetraethyl dithiopyrophosphate- 1.8 A 分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, FE (II) ION, ... 著者 Ollis, D.L, Jackson, C.J, Foo, J.L, Kim, H.K, Carr, P.D, Liu, J.W, Salem, G. 登録日 2007-08-23 公開日 2008-02-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 In crystallo capture of a Michaelis complex and product-binding modes of a bacterial phosphotriesterase J.Mol.Biol., 375, 2008
2R1M	OpdA from Agrobacterium radiobacter with bound product diethyl phosphate from crystal soaking with diethyl 4-methoxyphenyl phosphate (450h)- 2.5 A 分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, DIETHYL HYDROGEN PHOSPHATE, ... 著者 Ollis, D.L, Jackson, C.J, Foo, J.L, Kim, H.K, Carr, P.D, Liu, J.W, Salem, G. 登録日 2007-08-23 公開日 2008-02-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 In crystallo capture of a Michaelis complex and product-binding modes of a bacterial phosphotriesterase J.Mol.Biol., 375, 2008
2R1K	OpdA from Agrobacterium radiobacter with bound diethyl phosphate from crystal soaking with the compound- 1.9 A 分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, DIETHYL HYDROGEN PHOSPHATE, ... 著者 Ollis, D.L, Jackson, C.J, Foo, J.L, Kim, H.K, Carr, P.D, Liu, J.W, Salem, G. 登録日 2007-08-23 公開日 2008-02-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 In crystallo capture of a Michaelis complex and product-binding modes of a bacterial phosphotriesterase J.Mol.Biol., 375, 2008
2ZC1	Organophosphorus Hydrolase from Deinococcus radiodurans 分子名称: BROMIDE ION, COBALT (II) ION, Phosphotriesterase 著者 Larsen, S.D, Hawwa, R, Ratia, K, Santarsiero, B.D, Mesecar, A.D. 登録日 2007-11-02 公開日 2008-11-25 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 X-Ray Structural Insights into a Phosphotriesterase to be published
3A3W	Structure of OpdA mutant (G60A/A80V/S92A/R118Q/K185R/Q206P/D208G/I260T/G273S) with diethyl 4-methoxyphenyl phosphate bound in the active site 分子名称: COBALT (II) ION, DIETHYL 4-METHOXYPHENYL PHOSPHATE, Phosphotriesterase 著者 Ollis, D.L, Tawfik, D.S, Schenk, G, Jackson, C.J, Foo, J.L, Tokuriki, N, Afriat, L, Carr, P.D, Kim, H.K. 登録日 2009-06-23 公開日 2010-01-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Conformational sampling, catalysis, and evolution of the bacterial phosphotriesterase Proc.Natl.Acad.Sci.USA, 2009
3A3X	Structure of OpdA mutant (G60A/A80V/R118Q/K185R/Q206P/D208G/I260T/G273S) 分子名称: COBALT (II) ION, Phosphotriesterase 著者 Ollis, D.L, Tawfik, D.S, Schenk, G, Jackson, C.J, Foo, J.L, Tokuriki, N, Afriat, L, Carr, P.D, Kim, H.K. 登録日 2009-06-23 公開日 2010-01-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Conformational sampling, catalysis, and evolution of the bacterial phosphotriesterase Proc.Natl.Acad.Sci.USA, 2009

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