Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2Z55
DownloadVisualize
BU of 2z55 by Molmil
Bacterioruberin in the trimeric structure of archaerhodopsin-2
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, Archaerhodopsin-2, BACTERIORUBERIN, ...
Authors:Kouyama, T, Yoshimura, K.
Deposit date:2007-06-28
Release date:2008-01-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural role of bacterioruberin in the trimeric structure of archaerhodopsin-2
J.Mol.Biol., 375, 2008
2EI4
DownloadVisualize
BU of 2ei4 by Molmil
Trimeric complex of archaerhodopsin-2
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, Archaerhodopsin-2, BACTERIORUBERIN, ...
Authors:Kouyama, T.
Deposit date:2007-03-11
Release date:2008-01-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural role of bacterioruberin in the trimeric structure of archaerhodopsin-2
J.Mol.Biol., 375, 2008
2NTU
DownloadVisualize
BU of 2ntu by Molmil
Bacteriorhodopsin, wild type, before illumination
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Lanyi, J.K, Schobert, B.
Deposit date:2006-11-08
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural changes in the L photointermediate of bacteriorhodopsin.
J.Mol.Biol., 365, 2007
2NTW
DownloadVisualize
BU of 2ntw by Molmil
Bacteriorhodopsin, wild type, after illumination to produce the L intermediate
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Lanyi, J.K, Schobert, B.
Deposit date:2006-11-08
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural changes in the L photointermediate of bacteriorhodopsin.
J.Mol.Biol., 365, 2007
2JAF
DownloadVisualize
BU of 2jaf by Molmil
Ground state of halorhodopsin T203V
Descriptor: CHLORIDE ION, Halorhodopsin, PALMITIC ACID, ...
Authors:Gmelin, W, Zeth, K, Efremov, R, Heberle, J, Tittor, J, Oesterhelt, D.
Deposit date:2006-11-28
Release date:2006-12-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of the L1 intermediate of halorhodopsin at 1.9 angstroms resolution.
Photochem. Photobiol., 83, 2007
2JAG
DownloadVisualize
BU of 2jag by Molmil
L1-intermediate of halorhodopsin T203V
Descriptor: CHLORIDE ION, Halorhodopsin, PALMITIC ACID, ...
Authors:Gmelin, W, Zeth, K, Efremov, R, Heberle, J, Tittor, J, Oesterhelt, D.
Deposit date:2006-11-28
Release date:2006-12-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The crystal structure of the L1 intermediate of halorhodopsin at 1.9 angstroms resolution.
Photochem. Photobiol., 83, 2007
2I1X
DownloadVisualize
BU of 2i1x by Molmil
Bacteriorhodopsin/lipid complex, D96A mutant
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, Bacteriorhodopsin, ...
Authors:Lanyi, J.K, Schobert, B.
Deposit date:2006-08-15
Release date:2006-10-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Propagating Structural Perturbation Inside Bacteriorhodopsin: Crystal Structures of the M State and the D96A and T46V Mutants.
Biochemistry, 45, 2006
2I21
DownloadVisualize
BU of 2i21 by Molmil
Bacteriorhodopsin/lipid complex, T46V mutant
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, Bacteriorhodopsin, ...
Authors:Lanyi, J.K, Schobert, B.
Deposit date:2006-08-15
Release date:2006-10-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Propagating Structural Perturbation Inside Bacteriorhodopsin: Crystal Structures of the M State and the D96A and T46V Mutants.
Biochemistry, 45, 2006
2I20
DownloadVisualize
BU of 2i20 by Molmil
Bacteriorhodopsin/lipid complex, M state of D96A mutant
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, Bacteriorhodopsin, ...
Authors:Lanyi, J.K, Schobert, B.
Deposit date:2006-08-15
Release date:2006-10-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Propagating Structural Perturbation Inside Bacteriorhodopsin: Crystal Structures of the M State and the D96A and T46V Mutants.
Biochemistry, 45, 2006
2F95
DownloadVisualize
BU of 2f95 by Molmil
M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure
Descriptor: RETINAL, Sensory rhodopsin II, Sensory rhodopsin II transducer, ...
Authors:Moukhametzianov, R.I, Klare, J.P, Efremov, R.G, Baecken, C, Goeppner, A, Labahn, J, Engelhard, M, Bueldt, G, Gordeliy, V.I.
Deposit date:2005-12-05
Release date:2006-03-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Development of the signal in sensory rhodopsin and its transfer to the cognate transducer.
Nature, 440, 2006
2F93
DownloadVisualize
BU of 2f93 by Molmil
K Intermediate Structure of Sensory Rhodopsin II/Transducer Complex in Combination with the Ground State Structure
Descriptor: RETINAL, Sensory rhodopsin II, Sensory rhodopsin II transducer, ...
Authors:Moukhametzianov, R.I, Klare, J.P, Efremov, R.G, Baecken, C, Goeppner, A, Labahn, J, Engelhard, M, Bueldt, G, Gordeliy, V.I.
Deposit date:2005-12-05
Release date:2006-03-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of the signal in sensory rhodopsin and its transfer to the cognate transducer.
Nature, 440, 2006
1VGO
DownloadVisualize
BU of 1vgo by Molmil
Crystal Structure of Archaerhodopsin-2
Descriptor: Archaerhodopsin 2, RETINAL, SULFATE ION, ...
Authors:Yoshimura, K, Enami, N, Murakami, M, Okumura, H, Ihara, K, Kouyama, T.
Deposit date:2004-04-28
Release date:2005-10-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of archaerhodopsin-1 and -2: Common structural motif in archaeal light-driven proton pumps
J.Mol.Biol., 358, 2006
1X0S
DownloadVisualize
BU of 1x0s by Molmil
Crystal structure of the 13-cis isomer of bacteriorhodopsin
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
Authors:Nishikawa, T, Murakami, M, Kouyama, T.
Deposit date:2005-03-28
Release date:2005-08-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the 13-cis isomer of bacteriorhodopsin in the dark-adapted state.
J.Mol.Biol., 352, 2005
1X0K
DownloadVisualize
BU of 1x0k by Molmil
Crystal Structure of Bacteriorhodopsin at pH 10
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
Authors:Okumura, H, Murakami, M, Kouyama, T.
Deposit date:2005-03-23
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin
J.Mol.Biol., 351, 2005
1X0I
DownloadVisualize
BU of 1x0i by Molmil
Crystal Structure of the Acid Blue Form of Bacteriorhodopsin
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
Authors:Okumura, H, Murakami, M, Kouyama, T.
Deposit date:2005-03-23
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin
J.Mol.Biol., 351, 2005
1XJI
DownloadVisualize
BU of 1xji by Molmil
Bacteriorhodopsin crystallized in bicelles at room temperature
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Bacteriorhodopsin, DECANE, ...
Authors:Faham, S, Boulting, G.L, Massey, E.A, Yohannan, S, Yang, D, Bowie, J.U.
Deposit date:2004-09-23
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystallization of bacteriorhodopsin from bicelle formulations at room temperature
Protein Sci., 14, 2005
1TN5
DownloadVisualize
BU of 1tn5 by Molmil
Structure of bacterorhodopsin mutant K41P
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Yohannan, S, Yang, D, Faham, S, Boulting, G, Whitelegge, J, Bowie, J.U.
Deposit date:2004-06-11
Release date:2004-10-19
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Proline substitutions are not easily accommodated in a membrane protein
J.Mol.Biol., 341, 2004
1TN0
DownloadVisualize
BU of 1tn0 by Molmil
Structure of bacterorhodopsin mutant A51P
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Yohannan, S, Yang, D, Faham, S, Boulting, G, Whitelegge, J, Bowie, J.U.
Deposit date:2004-06-11
Release date:2004-10-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Proline substitutions are not easily accommodated in a membrane protein
J.Mol.Biol., 341, 2004
1XIO
DownloadVisualize
BU of 1xio by Molmil
Anabaena sensory rhodopsin
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ANABAENA SENSORY RHODOPSIN, RETINAL
Authors:Vogeley, L, Luecke, H.
Deposit date:2004-09-21
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Anabaena sensory rhodopsin: a photochromic color sensor at 2.0 A.
Science, 306, 2004
1S8J
DownloadVisualize
BU of 1s8j by Molmil
Nitrate-bound D85S mutant of bacteriorhodopsin
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin precursor, NITRATE ION, ...
Authors:Facciotti, M.T, Cheung, V.S, Lunde, C.S, Rouhani, S, Baliga, N.S, Glaeser, R.M.
Deposit date:2004-02-02
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Specificity of anion binding in the substrate pocket of bacteriorhodopsin.
Biochemistry, 43, 2004
1S8L
DownloadVisualize
BU of 1s8l by Molmil
Anion-free form of the D85S mutant of bacteriorhodopsin from crystals grown in the presence of halide
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin precursor, RETINAL
Authors:Facciotti, M.T, Cheung, V.S, Lunde, C.S, Rouhani, S, Baliga, N.S, Glaeser, R.M.
Deposit date:2004-02-02
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Specificity of anion binding in the substrate pocket of bacteriorhodopsin.
Biochemistry, 43, 2004
1VJM
DownloadVisualize
BU of 1vjm by Molmil
Deformation of helix C in the low-temperature L-intermediate of bacteriorhodopsin
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Edman, K, Royant, A, Larsson, G, Jacobson, F, Taylor, T, van der Spoel, D, Landau, E.M, Pebay-Peyroula, E, Neutze, R.
Deposit date:2004-03-12
Release date:2004-04-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Deformation of helix C in the low temperature L-intermediate of bacteriorhodopsin.
J.Biol.Chem., 279, 2004
1S53
DownloadVisualize
BU of 1s53 by Molmil
Thr46Ser Bacteriorhodopsin
Descriptor: RETINAL, bacteriorhodopsin
Authors:Yohannan, S, Faham, S, Yang, D, Grosfeld, D, Chamberlain, A.K, Bowie, J.U.
Deposit date:2004-01-19
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A C(alpha)-H.O Hydrogen Bond in a Membrane Protein Is Not Stabilizing
J.Am.Chem.Soc., 126, 2004
1S52
DownloadVisualize
BU of 1s52 by Molmil
Thr24Val Bacteriorhodopsin
Descriptor: RETINAL, bacteriorhodopsin
Authors:Yohannan, S, Faham, S, Yang, D, Grosfeld, D, Chamberlain, A.K, Bowie, J.U.
Deposit date:2004-01-19
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A C(alpha)-H.O Hydrogen Bond in a Membrane Protein Is Not Stabilizing
J.Am.Chem.Soc., 126, 2004
1S51
DownloadVisualize
BU of 1s51 by Molmil
Thr24Ser Bacteriorhodopsin
Descriptor: RETINAL, bacteriorhodopsin
Authors:Yohannan, S, Faham, S, Yang, D, Grosfeld, D, Chamberlain, A.K, Bowie, J.U.
Deposit date:2004-01-19
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A C(alpha)-H.O Hydrogen Bond in a Membrane Protein Is Not Stabilizing
J.Am.Chem.Soc., 126, 2004

220113

数据于2024-05-22公开中

PDB statisticsPDBj update infoContact PDBjnumon