2VV6
| BJFIXLH IN FERRIC FORM | Descriptor: | CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SENSOR PROTEIN FIXL, ... | Authors: | Ayers, R.A, Moffat, K. | Deposit date: | 2008-06-04 | Release date: | 2008-11-04 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains. Biochemistry, 47, 2008
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2W0N
| Plasticity of PAS domain and potential role for signal transduction in the histidine-kinase DcuS | Descriptor: | SENSOR PROTEIN DCUS | Authors: | Etzkorn, M, Kneuper, H, Duennwald, P, Vijayan, V, Kraemer, J, Griesinger, C, Becker, S, Unden, G, Baldus, M. | Deposit date: | 2008-08-19 | Release date: | 2008-09-30 | Last modified: | 2024-05-15 | Method: | SOLID-STATE NMR | Cite: | Plasticity of the Pas Domain and a Potential Role for Signal Transduction in the Histidine Kinase Dcus. Nat.Struct.Mol.Biol., 15, 2008
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1KOU
| Crystal Structure of the Photoactive Yellow Protein Reconstituted with Caffeic Acid at 1.16 A Resolution | Descriptor: | CAFFEIC ACID, N-BUTANE, PHOTOACTIVE YELLOW PROTEIN | Authors: | van Aalten, D.M.F, Crielaard, W, Hellingwerf, K.J, Joshua-Tor, L. | Deposit date: | 2001-12-22 | Release date: | 2002-04-03 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.16 Å) | Cite: | Structure of the photoactive yellow protein reconstituted with caffeic acid at 1.16 A resolution. Acta Crystallogr.,Sect.D, 58, 2002
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1LT0
| Crystal structure of the CN-bound BjFixL heme domain | Descriptor: | CYANIDE ION, PROTOPORPHYRIN IX CONTAINING FE, Sensor protein FixL | Authors: | Hao, B, Isaza, C, Arndt, J, Soltis, M, Chan, M.K. | Deposit date: | 2002-05-20 | Release date: | 2002-11-20 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structure-based mechanism of O2 sensing and ligand discrimination by
the FixL heme domain of Bradyrhizobium japonicum Biochemistry, 41, 2002
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1LSW
| Crystal structure of the ferrous BjFixL heme domain | Descriptor: | PROTOPORPHYRIN IX CONTAINING FE, Sensor protein FixL | Authors: | Hao, B, Isaza, C, Arndt, J, Soltis, M, Chan, M.K. | Deposit date: | 2002-05-20 | Release date: | 2002-11-20 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structure-based mechanism of O2 sensing and ligand discrimination by
the FixL heme domain of Bradyrhizobium japonicum Biochemistry, 41, 2002
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1LSV
| Crystal structure of the CO-bound BjFixL heme domain | Descriptor: | CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, Sensor protein FixL | Authors: | Hao, B, Isaza, C, Arndt, J, Soltis, M, Chan, M.K. | Deposit date: | 2002-05-19 | Release date: | 2002-11-20 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structure-based mechanism of O2 sensing and ligand discrimination by
the FixL heme domain of Bradyrhizobium japonicum Biochemistry, 41, 2002
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1LSX
| Crystal structure of the methylimidazole-bound BjFixL heme domain | Descriptor: | 1-METHYLIMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, Sensor protein FixL | Authors: | Hao, B, Isaza, C, Arndt, J, Soltis, M, Chan, M.K. | Deposit date: | 2002-05-20 | Release date: | 2002-11-20 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structure-based mechanism of O2 sensing and ligand discrimination by
the FixL heme domain of Bradyrhizobium japonicum Biochemistry, 41, 2002
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1NWZ
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1ODV
| Photoactive yellow protein 1-25 deletion mutant | Descriptor: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | Authors: | Vreede, J, Van Der horst, M.A, Hellingwerf, K.J, Crielaard, W, Van Aalten, D.M.F. | Deposit date: | 2003-03-14 | Release date: | 2003-03-18 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.14 Å) | Cite: | Pas Domains.Common Structure and Common Flexibility J.Biol.Chem., 278, 2003
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1OTB
| WILD TYPE PHOTOACTIVE YELLOW PROTEIN, P63 AT 295K | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Anderson, S, Crosson, S, Moffat, K. | Deposit date: | 2003-03-21 | Release date: | 2004-05-11 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.1 Å) | Cite: | Short hydrogen bonds in photoactive yellow protein. Acta Crystallogr.,Sect.D, 60, 2004
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1OT6
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1OT9
| CRYOTRAPPED STATE IN WILD TYPE PHOTOACTIVE YELLOW PROTEIN, INDUCED WITH CONTINUOUS ILLUMINATION AT 110K | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Anderson, S, Crosson, S, Moffat, K. | Deposit date: | 2003-03-21 | Release date: | 2004-05-11 | Last modified: | 2019-07-24 | Method: | X-RAY DIFFRACTION (1 Å) | Cite: | Short hydrogen bonds in photoactive yellow protein. Acta Crystallogr.,Sect.D, 60, 2004
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1OTI
| E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P65 AT 295K | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Anderson, S, Crosson, S, Moffat, K. | Deposit date: | 2003-03-21 | Release date: | 2004-05-11 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Short hydrogen bonds in photoactive yellow protein. Acta Crystallogr.,Sect.D, 60, 2004
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1OTD
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1OTE
| E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P65 AT 110K | Descriptor: | 4'-HYDROXYCINNAMIC ACID, photoactive yellow protein, PYP | Authors: | Anderson, S, Crosson, S, Moffat, K. | Deposit date: | 2003-03-21 | Release date: | 2004-05-11 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Short hydrogen bonds in photoactive yellow protein. Acta Crystallogr.,Sect.D, 60, 2004
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1OTA
| E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P63 AT 295K | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Anderson, S, Crosson, S, Moffat, K. | Deposit date: | 2003-03-21 | Release date: | 2004-05-11 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.1 Å) | Cite: | Short hydrogen bonds in photoactive yellow protein. Acta Crystallogr.,Sect.D, 60, 2004
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1S1Y
| Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 microseconds to 3 milliseconds | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Anderson, S, Srajer, V, Pahl, R, Rajagopal, S, Schotte, F, Anfinrud, P, Wulff, M, Moffat, K. | Deposit date: | 2004-01-07 | Release date: | 2004-06-15 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein Structure, 12, 2004
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1S1Z
| Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 to 500 nanoseconds | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive Yellow Protein | Authors: | Anderson, S, Srajer, V, Pahl, R, Rajagopal, S, Schotte, F, Anfinrud, P, Wulff, M, Moffat, K. | Deposit date: | 2004-01-07 | Release date: | 2004-06-15 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein Structure, 12, 2004
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1S4R
| Structure of a reaction intermediate in the photocycle of PYP extracted by a SVD-driven analysis | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Schmidt, M, Pahl, R, Srajer, V, Anderson, S, Ren, Z, Ihee, H, Rajagopal, S, Moffat, K. | Deposit date: | 2004-01-17 | Release date: | 2004-04-13 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved x-ray data Proc.Natl.Acad.Sci.USA, 101, 2004
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1S4S
| Reaction Intermediate in the Photocycle of PYP, intermediate occupied between 100 micro-seconds to 5 milli-seconds | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Schmidt, M, Pahl, R, Srajer, V, Anderson, S, Ren, Z, Ihee, H, Rajagopal, S, Moffat, K. | Deposit date: | 2004-01-17 | Release date: | 2004-04-13 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved x-ray data Proc.Natl.Acad.Sci.USA, 101, 2004
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1T1C
| Late intermediate IL3 from time-resolved crystallography of the E46Q mutant of PYP | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K. | Deposit date: | 2004-04-15 | Release date: | 2005-01-18 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein Structure, 13, 2005
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1T1B
| Late intermediate IL2 from time-resolved crystallography of the E46Q mutant of PYP | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K. | Deposit date: | 2004-04-15 | Release date: | 2005-01-18 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein Structure, 13, 2005
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1T19
| Early intermediate IE2 from time-resolved crystallography of the E46Q mutant of PYP | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K. | Deposit date: | 2004-04-15 | Release date: | 2005-01-18 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein Structure, 13, 2005
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1T1A
| Late intermediate IL1 from time-resolved crystallography of the E46Q mutant of PYP | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K. | Deposit date: | 2004-04-15 | Release date: | 2005-01-18 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein Structure, 13, 2005
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1T18
| Early intermediate IE1 from time-resolved crystallography of the E46Q mutant of PYP | Descriptor: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | Authors: | Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K. | Deposit date: | 2004-04-15 | Release date: | 2005-01-18 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein Structure, 13, 2005
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