PDB: 113 resultsInfo pagesStatus searchChemie searchBIRD

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1WLJ	human ISG20 Descriptor: ACETATE ION, MANGANESE (II) ION, URIDINE-5'-MONOPHOSPHATE, ... Authors: Horio, T, Murai, M, Inoue, T, Hamasaki, T, Tanaka, T, Ohgi, T. Deposit date: 2004-06-28 Release date: 2004-12-21 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of human ISG20, an interferon-induced antiviral ribonuclease Febs Lett., 577, 2004
1YTA	Crystal Structure of Oligoribonuclease, the lone essential exoribonuclease in Escherichia coli Descriptor: CITRATE ANION, Oligoribonuclease Authors: Fiedler, T.J, Zuo, Y, Malhotra, A. Deposit date: 2005-02-10 Release date: 2006-02-14 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal Structure of Oligoribonuclease, the lone essential exoribonuclease in Escherichia coli To be Published
2GBZ	The Crystal Structure of XC847 from Xanthomonas campestris: a 3-5 Oligoribonuclease of DnaQ fold family with a Novel Opposingly-Shifted Helix Descriptor: MAGNESIUM ION, Oligoribonuclease Authors: Chin, K.H, Yang, C.Y, Chou, C.C, Wang, A.H.J, Chou, S.H. Deposit date: 2006-03-12 Release date: 2007-01-16 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The crystal structure of XC847 from Xanthomonas campestris: a 3'-5' oligoribonuclease of DnaQ fold family with a novel opposingly shifted helix Proteins, 65, 2006
2IS3	Crystal Structure of Escherichia coli RNase T Descriptor: Ribonuclease T, SULFATE ION Authors: Zuo, Y, Wang, Y, Malhotra, A. Deposit date: 2006-10-16 Release date: 2007-04-24 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Crystal Structure of RNase T, an Exoribonuclease Involved in tRNA Maturation and End Turnover. Structure, 15, 2007
3NGZ	Crystal structure of RNase T in complex with a non-preferred ssDNA (GC) with one Mg in the active site Descriptor: 5'-D(P*GP*C)-3', COBALT (II) ION, MAGNESIUM ION, ... Authors: Hsiao, Y.-Y, Yuan, H.S. Deposit date: 2010-06-14 Release date: 2011-02-16 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for RNA trimming by RNase T in stable RNA 3'-end maturation Nat.Chem.Biol., 7, 2011
3NGY	Crystal structure of RNase T (E92G mutant) Descriptor: COBALT (II) ION, Ribonuclease T, his tag sequence Authors: Hsiao, Y.-Y, Yuan, H.S. Deposit date: 2010-06-14 Release date: 2011-02-16 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.204 Å) Cite: Structural basis for RNA trimming by RNase T in stable RNA 3'-end maturation Nat.Chem.Biol., 7, 2011
3NH1	Crystal structure of RNase T in complex with a preferred ssDNA (TAGG) with two Mg in the active site Descriptor: 5'-D(*TP*TP*AP*TP*AP*GP*G)-3', MAGNESIUM ION, Ribonuclease T Authors: Hsiao, Y.-Y, Yuan, H.S. Deposit date: 2010-06-14 Release date: 2011-02-16 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.107 Å) Cite: Structural basis for RNA trimming by RNase T in stable RNA 3'-end maturation Nat.Chem.Biol., 7, 2011
2IGI	Crystal Structure of E. coli Oligoribonuclease Descriptor: ACETIC ACID, CADMIUM ION, Oligoribonuclease, ... Authors: Zuo, Y, Malhotra, A. Deposit date: 2006-09-22 Release date: 2007-10-02 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal Structure of Oligoribonuclease, the lone essential exoribonuclease in Escherichia coli To be Published
3NH2	Crystal structure of RNase T in complex with a stem DNA with a 3' overhang Descriptor: 5'-D(P*TP*TP*AP*CP*AP*AP*C)-3', Ribonuclease T Authors: Hsiao, Y.-Y, Yuan, H.S. Deposit date: 2010-06-14 Release date: 2011-02-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for RNA trimming by RNase T in stable RNA 3'-end maturation Nat.Chem.Biol., 7, 2011
3NH0	Crystal structure of RNase T in complex with a non-preferred ssDNA (AAC) Descriptor: 5'-D(*TP*TP*AP*CP*AP*AP*C)-3', Ribonuclease T Authors: Hsiao, Y.-Y, Yuan, H.S. Deposit date: 2010-06-14 Release date: 2011-02-16 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for RNA trimming by RNase T in stable RNA 3'-end maturation Nat.Chem.Biol., 7, 2011
2GUI	Structure and Function of Cyclized Versions of the Proofreading Exonuclease Subunit of E. coli DNA Polymerase III Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA polymerase III epsilon subunit, ... Authors: Park, A.Y, Carr, P.D, Ollis, D.L, Dixon, N.E. Deposit date: 2006-04-30 Release date: 2007-03-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structure and Function of Cyclized Versions of the Proofreading Exonuclease Subunit E. coli DNA Polymerase III To be Published
4KB1	Crystal structure of RNase T in complex with a bluge DNA (two nucleotide insertion CT ) Descriptor: Bulge DNA, MAGNESIUM ION, Ribonuclease T Authors: Hsiao, Y.-Y, Yuan, H.S. Deposit date: 2013-04-23 Release date: 2014-03-05 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural insights into DNA repair by RNase T--an exonuclease processing 3' end of structured DNA in repair pathways. Plos Biol., 12, 2014
4KAZ	Crystal structure of RNase T in complex with a Y structured DNA Descriptor: DNA (5'-D(*TP*TP*GP*GP*CP*CP*CP*TP*CP*TP*TP*TP*AP*GP*GP*GP*CP*CP*CP*C)-3'), MAGNESIUM ION, Ribonuclease T Authors: Hsiao, Y.-Y, Yuan, H.S. Deposit date: 2013-04-23 Release date: 2014-03-05 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural insights into DNA repair by RNase T--an exonuclease processing 3' end of structured DNA in repair pathways. Plos Biol., 12, 2014
4KB0	Crystal structure of RNase T in complex with a bluge DNA (Two nucleotide insertion CC ) Descriptor: DNA (5'-D(*GP*GP*CP*CP*CP*TP*CP*TP*TP*TP*AP*GP*GP*GP*CP*CP*CP*C)-3'), MAGNESIUM ION, Ribonuclease T Authors: Hsiao, Y.-Y, Yuan, H.S. Deposit date: 2013-04-23 Release date: 2014-03-05 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.004 Å) Cite: Structural insights into DNA repair by RNase T--an exonuclease processing 3' end of structured DNA in repair pathways. Plos Biol., 12, 2014
4FZX	Exonuclease X in complex with 3' overhanging duplex DNA Descriptor: DNA (5'-D(P*CP*GP*GP*AP*TP*CP*CP*AP*CP*AP*AP*TP*GP*AP*CP*CP*T)-3'), DNA (5'-D(P*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3'), Exodeoxyribonuclease 10, ... Authors: Wang, T, Sun, H, Cheng, F, Bi, L, Jiang, T. Deposit date: 2012-07-08 Release date: 2013-07-03 Last modified: 2013-10-09 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Recognition and processing of double-stranded DNA by ExoX, a distributive 3'-5' exonuclease Nucleic Acids Res., 41, 2013
7V5H	VcOrn native structure with N terminal tag Descriptor: Oligoribonuclease Authors: Zhang, J, Zhang, Q, Bartlam, M. Deposit date: 2021-08-17 Release date: 2021-12-15 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of oligoribonuclease from Vibrio cholerae O1 El Tor with bound peptide. Acta Crystallogr.,Sect.F, 77, 2021
4FZY	Exonuclease X in complex with 12bp blunt-ended dsDNA Descriptor: DNA (5'-D(*TP*GP*TP*AP*GP*AP*TP*TP*CP*GP*AP*G)-3'), DNA (5'-D(P*CP*TP*CP*GP*AP*AP*TP*CP*TP*AP*CP*A)-3'), Exodeoxyribonuclease 10, ... Authors: Wang, T, Sun, H, Cheng, F, Bi, L, Jiang, T. Deposit date: 2012-07-08 Release date: 2013-07-03 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Recognition and processing of double-stranded DNA by ExoX, a distributive 3'-5' exonuclease Nucleic Acids Res., 41, 2013
4FZZ	Exonuclease X in complex with 5' overhanging duplex DNA Descriptor: DNA (5'-D(*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3'), Exodeoxyribonuclease 10, SODIUM ION Authors: Wang, T, Sun, H, Cheng, F, Bi, L, Jiang, T. Deposit date: 2012-07-08 Release date: 2013-07-03 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Recognition and processing of double-stranded DNA by ExoX, a distributive 3'-5' exonuclease Nucleic Acids Res., 41, 2013
7VH4	Crystal structure of oligoribonuclease of Escherichia coli Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... Authors: Badhwar, P, Taneja, B. Deposit date: 2021-09-20 Release date: 2022-09-28 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Three-dimensional structure of a mycobacterial oligoribonuclease reveals a unique C-terminal tail that stabilizes the homodimer. J.Biol.Chem., 298, 2022
7WIK	Crystal structure of oligoribonuclease of Mycobacterium smegmatis mc2 155 Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Badhwar, P, Taneja, B. Deposit date: 2022-01-03 Release date: 2022-12-21 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Three-dimensional structure of a mycobacterial oligoribonuclease reveals a unique C-terminal tail that stabilizes the homodimer. J.Biol.Chem., 298, 2022
7V9Z	PaOrn Oligoribonuclease native structure Descriptor: IMIDAZOLE, Oligoribonuclease, SULFATE ION Authors: Zhang, J, Zhang, Q, Bartlam, M. Deposit date: 2021-08-27 Release date: 2022-09-07 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.85 Å) Cite: PaOrn Oligoribonuclease native structure To Be Published
7VA3	PaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structure Descriptor: IMIDAZOLE, MANGANESE (II) ION, Oligoribonuclease, ... Authors: Zhang, J, Zhang, Q, Bartlam, M. Deposit date: 2021-08-27 Release date: 2022-09-07 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.8 Å) Cite: PaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structure To Be Published
7VA6	PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure Descriptor: IMIDAZOLE, Oligoribonuclease, RNA (5'-R(P*GP*U)-3') Authors: Zhang, J, Zhang, Q, Bartlam, M. Deposit date: 2021-08-27 Release date: 2022-09-07 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.1 Å) Cite: PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure To Be Published
7VA2	PaOrn Oligoribonuclease D11A mutant with product GMP complex structure Descriptor: GUANOSINE-5'-MONOPHOSPHATE, IMIDAZOLE, Oligoribonuclease, ... Authors: Zhang, J, Zhang, Q, Bartlam, M. Deposit date: 2021-08-27 Release date: 2022-09-07 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.3 Å) Cite: PaOrn Oligoribonuclease D11A mutant with product GMP complex structure To Be Published
3TR8	Structure of an oligoribonuclease (orn) from Coxiella burnetii Descriptor: ACETATE ION, MAGNESIUM ION, MANGANESE (II) ION, ... Authors: Cheung, J, Franklin, M.C, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J. Deposit date: 2011-09-09 Release date: 2011-09-21 Last modified: 2017-11-08 Method: X-RAY DIFFRACTION (2.503 Å) Cite: Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins, 83, 2015

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