Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3TQK
DownloadVisualize
BU of 3tqk by Molmil
Structure of Phospho-2-dehydro-3-deoxyheptonate aldolase from Francisella tularensis SCHU S4
分子名称: ACETATE ION, CALCIUM ION, MANGANESE (II) ION, ...
著者Franklin, M.C, Cheung, J, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
登録日2011-09-09
公開日2011-09-21
最終更新日2014-08-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Rapid countermeasure discovery against Francisella tularensis based on a metabolic network reconstruction.
Plos One, 8, 2013
2NXI
DownloadVisualize
BU of 2nxi by Molmil
Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase.
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, PHOSPHATE ION, PHOSPHOENOLPYRUVATE
著者Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
登録日2006-11-17
公開日2007-07-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and mechanistic changes along an engineered path from metallo to nonmetallo 3-deoxy-D-manno-octulosonate 8-phosphate synthases
Biochemistry, 46, 2007
1VS1
DownloadVisualize
BU of 1vs1 by Molmil
Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Aeropyrum pernix in complex with Mn2+ and PEP
分子名称: 3-deoxy-7-phosphoheptulonate synthase, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE
著者Shumilin, I.A, Zhou, L, Wu, J, Woodard, R.W, Bauerle, R, Kretsinger, R.H.
登録日2006-03-09
公開日2006-05-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Aeropyrum pernix in complex with Mn2+ and PEP
TO BE PUBLISHED
5DCD
DownloadVisualize
BU of 5dcd by Molmil
Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase regulated (Tyrosine)
分子名称: MANGANESE (II) ION, Phospho-2-dehydro-3-deoxyheptonate aldolase, SULFATE ION, ...
著者Heyes, L.C, Parker, E.
登録日2015-08-24
公開日2016-08-24
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structure of Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase regulated and complexed with PEP at 2.05 Angstroms
To Be Published
4UMC
DownloadVisualize
BU of 4umc by Molmil
Structural analysis of substrate-mimicking inhibitors in complex with Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase - the importance of accommodating the active site water
分子名称: L-PHOSPHOLACTATE, MANGANESE (II) ION, PHOSPHATE ION, ...
著者Heyes, L.C, Reichau, S, Cross, P.J, Parker, E.J.
登録日2014-05-16
公開日2014-10-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural Analysis of Substrate-Mimicking Inhibitors in Complex with Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase - the Importance of Accommodating the Active Site Water.
Bioorg.Chem., 57, 2014
3PG9
DownloadVisualize
BU of 3pg9 by Molmil
Thermotoga maritima DAH7P synthase in complex with inhibitor
分子名称: AZIDE ION, CHLORIDE ION, NITRATE ION, ...
著者Cross, P.J, Dobson, R.C.J, Patchett, M.L, Parker, E.J.
登録日2010-10-31
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Tyrosine latching of a regulatory gate affords allosteric control of aromatic amino acid biosynthesis
J.Biol.Chem., 286, 2011
5D09
DownloadVisualize
BU of 5d09 by Molmil
Neisseria meningitidis 3 deoxy-D-arabino-heptulosonate 7-phosphate synthase Phe211Ala variant
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
著者Heyes, L.C, Parker, E.J.
登録日2015-08-02
公開日2016-08-10
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Neisseria meningitidis 3 deoxy-D-arabino-heptulosonate 7-phosphate synthase Phe211Ala variant at 2.35 Angstroms resolution
To Be Published
1PHW
DownloadVisualize
BU of 1phw by Molmil
Crystal structure of KDO8P synthase in its binary complex with substrate analog 1-deoxy-A5P
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, ANY 5'-MONOPHOSPHATE NUCLEOTIDE
著者Vainer, R, Belakhov, V, Rabkin, E, Baasov, T, Adir, N.
登録日2003-05-29
公開日2004-07-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Crystal structures of Escherichia coli KDO8P synthase complexes reveal the source of catalytic irreversibility.
J.Mol.Biol., 351, 2005
4IXX
DownloadVisualize
BU of 4ixx by Molmil
Crystal structure of S213G variant DAH7PS without Tyr bound from Neisseria meningitidis
分子名称: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, MANGANESE (II) ION, SULFATE ION
著者Cross, P.J, Pietersma, A.L, Allison, T.M, Wilson-Coutts, S.M, Cochrane, F.C, Parker, E.J.
登録日2013-01-28
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Neisseria meningitidis expresses a single 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase that is inhibited primarily by phenylalanine.
Protein Sci., 22, 2013
1X8F
DownloadVisualize
BU of 1x8f by Molmil
Crystal Structure Of apo-Kdo8P Synthase
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Vainer, R, Belakhov, V, Rabkin, E, Baasov, T, Adir, N.
登録日2004-08-18
公開日2005-07-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of Escherichia coli KDO8P Synthase Complexes Reveal the Source of Catalytic Irreversibility
J.Mol.Biol., 351, 2005
1G7V
DownloadVisualize
BU of 1g7v by Molmil
CRYSTAL STRUCTURES OF KDO8P SYNTHASE IN ITS BINARY COMPLEXES WITH THE MECHANISM-BASED INHIBITOR
分子名称: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, {[(2,2-DIHYDROXY-ETHYL)-(2,3,4,5-TETRAHYDROXY-6-PHOSPHONOOXY-HEXYL)-AMINO]-METHYL}-PHOSPHONIC ACID
著者Asojo, O.A, Friedman, J.M, Belakhov, V, Shoham, Y, Adir, N, Baasov, T.
登録日2000-11-14
公開日2001-05-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of KDOP synthase in its binary complexes with the substrate phosphoenolpyruvate and with a mechanism-based inhibitor.
Biochemistry, 40, 2001
8E0Z
DownloadVisualize
BU of 8e0z by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase unbound:(bound)2:unbound Conformations
分子名称: CHLORIDE ION, Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
4Z1B
DownloadVisualize
BU of 4z1b by Molmil
Structure of H204A mutant KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
1D9E
DownloadVisualize
BU of 1d9e by Molmil
STRUCTURE OF E. COLI KDO8P SYNTHASE
分子名称: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE SYNTHASE, SULFATE ION
著者Radaev, S, Dastidar, P, Patel, M, Woodard, R.W, Gatti, D.L.
登録日1999-10-27
公開日2000-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and mechanism of 3-deoxy-D-manno-octulosonate 8-phosphate synthase.
J.Biol.Chem., 275, 2000
8E0U
DownloadVisualize
BU of 8e0u by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with Sulfate in unbound:(bound)2:other conformations
分子名称: Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive, SULFATE ION
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
5CZS
DownloadVisualize
BU of 5czs by Molmil
Neisseria meningitidis 3 dexy-D-arabino-heptulosonate 7-phosphate synthase Glu98Ala variant regulated
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
著者Heyes, L.C, Parker, E.J.
登録日2015-08-01
公開日2016-08-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structure of Neisseria meningitidis 3 dexy-D-arabino-heptulosonate 7-phosphate synthase Glu98Ala variant at 2.42 Angstroms resolution
To Be Published
6U8J
DownloadVisualize
BU of 6u8j by Molmil
Crystal structure of 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase/phospho-2-dehydro-3-deoxyheptonate aldolase (Aro3) from Candida auris
分子名称: Phospho-2-dehydro-3-deoxyheptonate aldolase, UNKNOWN ATOM OR ION
著者Michalska, K, Evdokimova, E, Semper, C, Di Leo, R, Stogios, P.J, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-09-05
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.492 Å)
主引用文献Crystal structure of 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase/phospho-2-dehydro-3-deoxyheptonate aldolase (Aro3) from Candida auris
To Be Published
7RUE
DownloadVisualize
BU of 7rue by Molmil
DAHP synthase complexed with trifluoropyruvate semicarbazone
分子名称: (2E)-2-(2-carbamoylhydrazinylidene)-3,3,3-trifluoropropanoic acid, MANGANESE (II) ION, Phospho-2-dehydro-3-deoxyheptonate aldolase, ...
著者Heimhalt, M, Mukherjee, P, Grainger, R, Szabla, R, Brown, C, Turner, R, Junop, M.S, Berti, P.J.
登録日2021-08-16
公開日2021-11-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An Inhibitor-in-Pieces Approach to DAHP Synthase Inhibition: Potent Enzyme and Bacterial Growth Inhibition.
Acs Infect Dis., 7, 2021
5CZ0
DownloadVisualize
BU of 5cz0 by Molmil
Neisseria meningitidis 3 dexy-D-arabino-heptulosonate 7-phosphate synthase Glu98Ala variant
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, ...
著者Heyes, L.C, Parker, E.J.
登録日2015-07-31
公開日2016-08-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献NmeDAH7PS E98A variant at 2.5 Angstroms resolution
To Be Published
6AGL
DownloadVisualize
BU of 6agl by Molmil
Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli
分子名称: Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive
著者Cui, D, Qi, J, Wen, T.
登録日2018-08-13
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli.
J.Struct.Biol., 206, 2019
6MDY
DownloadVisualize
BU of 6mdy by Molmil
Crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from Legionella pneumophila Philadelphia 1
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2018-09-05
公開日2018-09-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from Legionella pneumophila Philadelphia 1
To Be Published
1QR7
DownloadVisualize
BU of 1qr7 by Molmil
CRYSTAL STRUCTURE OF PHENYLALANINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM ESCHERICHIA COLI COMPLEXED WITH PB2+ AND PEP
分子名称: LEAD (II) ION, PHENYLALANINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE, PHOSPHOENOLPYRUVATE, ...
著者Shumilin, I.A, Kretsinger, R.H, Bauerle, R.H.
登録日1999-06-18
公開日1999-08-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of phenylalanine-regulated 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Escherichia coli.
Structure Fold.Des., 7, 1999
1X6U
DownloadVisualize
BU of 1x6u by Molmil
KDO8P synthase in it's binary complex with the product KDO8P
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, 3-deoxy-8-O-phosphono-alpha-D-manno-oct-2-ulopyranosonic acid
著者Vainer, R, Belakhov, V, Rabkin, E, Baasov, T, Adir, N.
登録日2004-08-12
公開日2005-07-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of Escherichia coli KDO8P Synthase Complexes Reveal the Source of Catalytic Irreversibility
J.Mol.Biol., 351, 2005
3QQ1
DownloadVisualize
BU of 3qq1 by Molmil
Crystal structure of a double mutant [A58P, DEL(N59)] of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Allison, T.M, Jameson, G.B, Parker, E.J.
登録日2011-02-14
公開日2011-04-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Targeting the role of a key conserved motif for substrate selection and catalysis by 3-deoxy-D-manno-octulosonate 8-phosphate synthase
Biochemistry, 50, 2011
1OFQ
DownloadVisualize
BU of 1ofq by Molmil
CRYSTAL STRUCTURE OF THE TYROSINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH MANGANESE(II)
分子名称: MANGANESE (II) ION, PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE
著者Koenig, V, Pfeil, A, Heinrich, G, Braus, G.H, Schneider, T.R.
登録日2003-04-17
公開日2004-04-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism
J.Mol.Biol., 337, 2004

220113

件を2024-05-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon