PDB: 657 resultsInfo pagesStatus searchChemie searchBIRD

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7FT5	SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with POB0093 Descriptor: 1,2-ETHANEDIOL, 4-(4-methoxyphenyl)oxane-4-carboxylic acid, ALANINE, ... Authors: Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E. Deposit date: 2023-01-24 Release date: 2023-02-15 Method: X-RAY DIFFRACTION (1.77 Å) Cite: SDCBP PanDDA analysis group deposition To Be Published
7FTC	SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1509711879 Descriptor: 1,2-ETHANEDIOL, 6-bromo-7-hydroxy-2,2-dimethyl-2H,4H-1,3-benzodioxin-4-one, ALANINE, ... Authors: Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E. Deposit date: 2023-01-24 Release date: 2023-02-15 Method: X-RAY DIFFRACTION (1.87 Å) Cite: SDCBP PanDDA analysis group deposition To Be Published
7FT2	SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z235449082 Descriptor: 1,2-ETHANEDIOL, ALANINE, D-GLUTAMIC ACID, ... Authors: Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E. Deposit date: 2023-01-24 Release date: 2023-02-15 Method: X-RAY DIFFRACTION (2.04 Å) Cite: SDCBP PanDDA analysis group deposition To Be Published
8BLV	The PDZ domains of human SDCBP with a bound SDC4 C-terminal peptide Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Syndecan-4, ... Authors: Bradshaw, W.J, Katis, V.L, Daniel-Mozo, M, Bountra, C, von Delft, F, Brennan, P.E. Deposit date: 2022-11-10 Release date: 2022-12-21 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The PDZ domains of human SDCBP with a bound SDC4 C-terminal peptide To Be Published
8BLU	The PDZ domains of human SDCBP Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ALANINE, ... Authors: Bradshaw, W.J, Katis, V.L, Daniel-Mozo, M, Bountra, C, von Delft, F, Brennan, P.E. Deposit date: 2022-11-10 Release date: 2022-11-30 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The PDZ domains of human SDCBP To Be Published
8F1U	Structure of a 24mer DegP cage bound to the client protein hTRF1 Descriptor: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 Authors: Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. Deposit date: 2022-11-06 Release date: 2022-11-23 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (13.8 Å) Cite: Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F26	Structure of a 60mer DegP cage bound to the client protein hTRF1 Descriptor: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 Authors: Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. Deposit date: 2022-11-07 Release date: 2022-11-23 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (9.7 Å) Cite: Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F0U	Structure of a 12mer DegP cage bound to the client protein hTRF1 Descriptor: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 Authors: Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. Deposit date: 2022-11-04 Release date: 2022-11-23 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F21	Structure of a 30mer DegP cage bound to the client protein hTRF1 Descriptor: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 Authors: Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. Deposit date: 2022-11-06 Release date: 2022-11-23 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (14.1 Å) Cite: Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F0A	Client-bound structure of a DegP trimer within a 12mer cage Descriptor: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 Authors: Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. Deposit date: 2022-11-02 Release date: 2022-11-23 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F1T	Structure of an 18mer DegP cage bound to the client protein hTRF1 Descriptor: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 Authors: Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. Deposit date: 2022-11-06 Release date: 2022-11-23 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (12.1 Å) Cite: Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
7WEG	Complex structure of PDZD7 and FCHSD2 Descriptor: FCHSD2, PDZ domain-containing protein 7, ZINC ION Authors: Wang, H, Lin, L, Lu, Q. Deposit date: 2021-12-23 Release date: 2022-11-16 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2 Å) Cite: Deafness-related protein PDZD7 forms complex with the C-terminal tail of FCHSD2. Biochem.J., 479, 2022
7W6X	Crystal structure of E. coli RseP in complex with batimastat Descriptor: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, Regulator of sigma-E protease RseP, ZINC ION Authors: Takanuki, K, Imaizumi, Y, Nogi, T. Deposit date: 2021-12-02 Release date: 2022-09-07 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP. Sci Adv, 8, 2022
7W71	Crystal structure of the PDZ-C domain of E. coli RseP in complex with 12C7 Fab Descriptor: Heavy chain of Fab, Light chain of Fab, Regulator of sigma-E protease RseP Authors: Hirose, T, Katagiri, S, Nogi, T. Deposit date: 2021-12-02 Release date: 2022-09-07 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP. Sci Adv, 8, 2022
7QCX	Two-state liquid NMR Structure of a PDZ2 Domain from hPTP1E, apo form Descriptor: Tyrosine-protein phosphatase non-receptor type 13 Authors: Ashkinadze, D, Kadavath, H, Chi, C, Friedmann, M, Strotz, D, Kumari, P, Minges, M, Cadalbert, R, Koenigl, S, Guentert, P, Voegeli, B, Riek, R. Deposit date: 2021-11-25 Release date: 2022-09-07 Last modified: 2022-11-02 Method: SOLUTION NMR Cite: Atomic resolution protein allostery from the multi-state structure of a PDZ domain. Nat Commun, 13, 2022
7QCY	Two-state liquid NMR Structure of a PDZ2 Domain from hPTP1E, complexed with RA-GEF2 peptide Descriptor: Tyrosine-protein phosphatase non-receptor type 13 Authors: Ashkinadze, D, Kadavath, H, Chi, C, Friedmann, M, Strotz, D, Kumari, P, Minges, M, Cadalbert, R, Koenigl, S, Guentert, P, Voegeli, B, Riek, R. Deposit date: 2021-11-25 Release date: 2022-09-07 Last modified: 2022-11-02 Method: SOLUTION NMR Cite: Atomic resolution protein allostery from the multi-state structure of a PDZ domain. Nat Commun, 13, 2022
7QRS	Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 Descriptor: ACETATE ION, GLYCEROL, Protein Tax-1, ... Authors: Javorsky, A, Soares da Costa, T.P, Mackie, E.R, Humbert, P.O, Kvansakul, M. Deposit date: 2022-01-12 Release date: 2022-09-07 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 PBM. Febs J., 290, 2023
7QRT	Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 Descriptor: CHLORIDE ION, Protein Tax-1, Protein scribble homolog, ... Authors: Javorsky, A, Soares da Costa, T.P, Mackie, E.R, Humbert, P.O, Kvansakul, M, Maddumage, J.C. Deposit date: 2022-01-12 Release date: 2022-09-07 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 PBM. Febs J., 290, 2023
7QS8	Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 Descriptor: Protein Tax-1, Protein scribble homolog Authors: Javorsky, A, Soares da Costa, T.P, Mackie, E.R, Humbert, P.O, Kvansakul, M. Deposit date: 2022-01-13 Release date: 2022-09-07 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 PBM. Febs J., 290, 2023
7RM8	Solution NMR structure of PDLIM7 PDZ bound to SNX17 peptide Descriptor: Isoform 4 of PDZ and LIM domain protein 7,Sorting nexin-17 fusion Authors: Healy, M.D, Collins, B.M, Mobli, M. Deposit date: 2021-07-26 Release date: 2022-08-31 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Proteomic identification and structural basis for the interaction between sorting nexin SNX17 and PDLIM family proteins. Structure, 30, 2022
7QSB	Structural basis on the interaction of Scribble PDZ domains with the Tick Born encephalitis virus (TBEV) NS5 protein Descriptor: Protein scribble homolog Authors: Javorsky, A, Humbert, P.O, Kvansakul, M. Deposit date: 2022-01-13 Release date: 2022-08-31 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.84 Å) Cite: Molecular basis of Tick Born encephalitis virus NS5 mediated subversion of apico-basal cell polarity signalling. Biochem.J., 479, 2022
7QSA	Structural basis on the interaction of Scribble PDZ domains with the Tick Born encephalitis virus (TBEV) NS5 protein Descriptor: Protein scribble homolog, RNA-directed RNA polymerase NS5 Authors: Javorsky, A, Humbert, P.O, Kvansakul, M. Deposit date: 2022-01-13 Release date: 2022-08-31 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Molecular basis of Tick Born encephalitis virus NS5 mediated subversion of apico-basal cell polarity signalling. Biochem.J., 479, 2022
7QS9	Structural basis on the interaction of Scribble PDZ domains with the Tick Born encephalitis virus (TBEV) NS5 protein Descriptor: Protein scribble homolog, RNA-directed RNA polymerase NS5 Authors: Javorsky, A, Humbert, P.O, Kvansakul, M. Deposit date: 2022-01-13 Release date: 2022-08-31 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Molecular basis of Tick Born encephalitis virus NS5 mediated subversion of apico-basal cell polarity signalling. Biochem.J., 479, 2022
7P72	The PDZ domain of SNX27 complexed with the PDZ-binding motif of MERS-E Descriptor: CALCIUM ION, Envelope small membrane protein, GLYCEROL, ... Authors: Gogl, G, Cousido-Siah, A, Trave, G. Deposit date: 2021-07-19 Release date: 2022-07-27 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Quantitative fragmentomics allow affinity mapping of interactomes. Nat Commun, 13, 2022
7P73	The PDZ domain of SYNJ2BP complexed with the PDZ-binding motif of HTLV1-TAX1 Descriptor: CALCIUM ION, GLYCEROL, Protein Tax-1, ... Authors: Gogl, G, Cousido-Siah, A, Trave, G. Deposit date: 2021-07-19 Release date: 2022-07-27 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Quantitative fragmentomics allow affinity mapping of interactomes. Nat Commun, 13, 2022

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