PDB: 657 件ウェブページステータス検索Chemie searchBIRD

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4JOG	CFTR Associated Ligand (CAL) PDZ domain bound to peptide V-iCAL36 (ANSRVPTSII) 分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, V-iCAL36 peptide 著者 Amacher, J.F, Madden, D.R. 登録日 2013-03-18 公開日 2014-01-22 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.465 Å) 主引用文献 Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4JOF	CFTR Associated Ligand (CAL) PDZ domain bound to peptide L-iCAL36 (ANSRLPTSII) 分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, L-iCAL36 peptide 著者 Amacher, J.F, Madden, D.R. 登録日 2013-03-18 公開日 2014-01-22 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4JOE	CFTR Associated Ligand (CAL) PDZ domain bound to peptide A-iCAL36 (ANSRAPTSII) 分子名称: A-iCAL36 peptide, GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein 著者 Amacher, J.F, Madden, D.R. 登録日 2013-03-18 公開日 2014-01-22 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4JL7	Crystal Structure of the Chemokine Receptor CXCR2 in Complex with the First PDZ Domain of NHERF1 分子名称: CHLORIDE ION, Na(+)/H(+) exchange regulatory cofactor NHE-RF1 著者 Lu, G, Wu, Y, Jiang, Y, Brunzelle, J, Sirinupong, N, Li, C, Yang, Z. 登録日 2013-03-12 公開日 2013-10-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 Structural Insights into Neutrophilic Migration Revealed by the Crystal Structure of the Chemokine Receptor CXCR2 in Complex with the First PDZ Domain of NHERF1. Plos One, 8, 2013
4HOP	Crystal structure of the computationally designed NNOS-Syntrophin complex 分子名称: Alpha-1-syntrophin, Nitric oxide synthase, brain 著者 Harwood, I.M, Melero, C, Ollikainen, N, Kortemme, T. 登録日 2012-10-22 公開日 2013-11-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Quantification of the transferability of a designed protein specificity switch reveals extensive epistasis in molecular recognition. Proc.Natl.Acad.Sci.USA, 111, 2014
4H11	Interaction partners of PSD-93 studied by X-ray crystallography and fluorescent polarization spectroscopy 分子名称: ACETATE ION, Disks large homolog 2, SULFATE ION 著者 Fiorentini, M, Kastrup, J.S, Gajhede, M. 登録日 2012-09-10 公開日 2013-04-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Interaction partners of PSD-93 studied by X-ray crystallography and fluorescence polarization spectroscopy. Acta Crystallogr.,Sect.D, 69, 2013
4GVD	Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in complex with Syndecan1 Peptide 分子名称: 5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID), CHLORIDE ION, SODIUM ION, ... 著者 Liu, X, Shepherd, T.R, Murray, A.M, Xu, Z, Fuentes, E.J. 登録日 2012-08-30 公開日 2013-03-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics. Structure, 21, 2013
4GVC	Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in complex with phosphorylated Syndecan1 Peptide 分子名称: 5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID), CHLORIDE ION, SODIUM ION, ... 著者 Liu, X, Shepherd, T.R, Murray, A.M, Xu, Z, Fuentes, E.J. 登録日 2012-08-30 公開日 2013-03-13 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics. Structure, 21, 2013
4G69	Structure of the Human Discs Large 1 PDZ2 - Adenomatous Polyposis Coli Cytoskeletal Polarity Complex 分子名称: Adenomatous polyposis coli protein, Disks large homolog 1 著者 Slep, K.C. 登録日 2012-07-18 公開日 2012-12-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of the Human Discs Large 1 PDZ2- Adenomatous Polyposis Coli Cytoskeletal Polarity Complex: Insight into Peptide Engagement and PDZ Clustering. Plos One, 7, 2012
4F8K	Molecular analysis of the interaction between the prostacyclin receptor and the first PDZ domain of PDZK1 分子名称: Na(+)/H(+) exchange regulatory cofactor NHE-RF3, Prostacyclin receptor 著者 Kocher, O, Birrane, G, Kinsella, B.T, Mulvaney, E.P. 登録日 2012-05-17 公開日 2013-02-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Molecular Analysis of the Prostacyclin Receptor's Interaction with the PDZ1 Domain of Its Adaptor Protein PDZK1. Plos One, 8, 2013
4E3B	Crystal structure of Tax-Interacting Protein-1 (TIP-1) PDZ domain bound to iCAL36-L (ANSRWPTSIL) peptide 分子名称: Tax1-binding protein 3, iCAL50 peptide 著者 Amacher, J.F, Madden, D.R. 登録日 2012-03-09 公開日 2012-12-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP. J.Biol.Chem., 288, 2013
4E35	Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36-L (ANSRWPTSIL) peptide 分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL50 peptide 著者 Amacher, J.F, Madden, D.R. 登録日 2012-03-09 公開日 2012-12-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP. J.Biol.Chem., 288, 2013
4E34	Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36 (ANSRWPTSII) peptide 分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, decameric peptide, ... 著者 Amacher, J.F, Beck, T, Madden, D.R. 登録日 2012-03-09 公開日 2012-12-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.395 Å) 主引用文献 Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP. J.Biol.Chem., 288, 2013
4AMH	Influence of circular permutation on the folding pathway of a PDZ domain 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DISKS LARGE HOMOLOG 1, GLYCEROL 著者 Hultqvist, G, Punekar, A.S, Chi, C.N, Selmer, M, Gianni, S, Jemth, P. 登録日 2012-03-10 公開日 2012-12-05 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Tolerance of Protein Folding to a Circular Permutation in a Pdz Domain Plos One, 7, 2012
4A9G	Symmetrized cryo-EM reconstruction of E. coli DegQ 24-mer in complex with beta-casein 分子名称: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ 著者 Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R. 登録日 2011-11-26 公開日 2012-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
4A8D	DegP dodecamer with bound OMP 分子名称: OUTER MEMBRANE PROTEIN C, PERIPLASMIC SERINE ENDOPROTEASE DEGP 著者 Malet, H, Krojer, T, Sawa, J, Schafer, E, Saibil, H.R, Ehrmann, M, Clausen, T. 登録日 2011-11-20 公開日 2012-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (28 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
4A8C	Symmetrized cryo-EM reconstruction of E. coli DegQ 12-mer in complex with a binding peptide 分子名称: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ 著者 Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R. 登録日 2011-11-20 公開日 2012-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
4A8B	Symmetrized cryo-EM reconstruction of E. coli DegQ 12-mer in complex with lysozymes 分子名称: LYSOZYME C, PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ 著者 Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R. 登録日 2011-11-20 公開日 2012-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (13 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
4A8A	Asymmetric cryo-EM reconstruction of E. coli DegQ 12-mer in complex with lysozyme 分子名称: LYSOZYME C, PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ 著者 Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R. 登録日 2011-11-20 公開日 2011-12-28 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (14.2 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
3ZRT	Crystal structure of human PSD-95 PDZ1-2 分子名称: DISKS LARGE HOMOLOG 4 著者 Sorensen, P.L, Kastrup, J.S, Gajhede, M. 登録日 2011-06-19 公開日 2012-03-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.398 Å) 主引用文献 A High-Affinity, Dimeric Inhibitor of Psd-95 Bivalently Interacts with Pdz1-2 and Protects Against Ischemic Brain Damage. Proc.Natl.Acad.Sci.USA, 109, 2012
3VQG	Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein 分子名称: C-terminal peptide from Immunoglobulin superfamily member 5, E3 ubiquitin-protein ligase LNX, SULFATE ION 著者 Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H. 登録日 2012-03-23 公開日 2013-03-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase To be Published
3VQF	Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein 分子名称: E3 ubiquitin-protein ligase LNX 著者 Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H. 登録日 2012-03-22 公開日 2013-03-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.199 Å) 主引用文献 Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase To be Published
3TSZ	crystal structure of PDZ3-SH3-GUK core module from human ZO-1 in complex with 12mer peptide from human JAM-A cytoplasmic tail 分子名称: Junctional adhesion molecule A, Tight junction protein ZO-1 著者 Nomme, J, Lavie, A. 登録日 2011-09-13 公開日 2011-10-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.502 Å) 主引用文献 The Src Homology 3 Domain Is Required for Junctional Adhesion Molecule Binding to the Third PDZ Domain of the Scaffolding Protein ZO-1. J.Biol.Chem., 286, 2011
3TSW	crystal structure of the PDZ3-SH3-GUK core module of Human ZO-1 分子名称: SULFATE ION, Tight junction protein ZO-1 著者 Nomme, J, Lavie, A. 登録日 2011-09-13 公開日 2011-10-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.847 Å) 主引用文献 The Src Homology 3 Domain Is Required for Junctional Adhesion Molecule Binding to the Third PDZ Domain of the Scaffolding Protein ZO-1. J.Biol.Chem., 286, 2011
3TSV	crystal structure of the third PDZ domain of the human ZO-1 MAGUK protein 分子名称: Tight junction protein ZO-1 著者 Nomme, J, Lavie, A. 登録日 2011-09-13 公開日 2011-10-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.989 Å) 主引用文献 The Src Homology 3 Domain Is Required for Junctional Adhesion Molecule Binding to the Third PDZ Domain of the Scaffolding Protein ZO-1. J.Biol.Chem., 286, 2011

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