PDB: 316 resultsInfo pagesStatus searchChemie searchBIRD

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4GA7	Crystal structure of human serpinB1 mutant Descriptor: Leukocyte elastase inhibitor Authors: Wang, L, Li, Q, Wu, L, Zhang, K, Tong, L, Sun, F, Fan, Z. Deposit date: 2012-07-25 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Identification of SERPINB1 as a physiological inhibitor of human granzyme H J.Immunol., 190, 2013
4GAW	Crystal structure of active human granzyme H Descriptor: CHLORIDE ION, Granzyme H, SULFATE ION Authors: Wang, L, Li, Q, Wu, L, Zhang, K, Tong, L, Sun, F, Fan, Z. Deposit date: 2012-07-25 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3 Å) Cite: Identification of SERPINB1 as a physiological inhibitor of human granzyme H J.Immunol., 190, 2013
4FWE	Native structure of LSD2 /AOF1/KDM1b in spacegroup of C2221 at 2.13A Descriptor: CITRATE ANION, FLAVIN-ADENINE DINUCLEOTIDE, Lysine-specific histone demethylase 1B, ... Authors: Zhang, Q, Chen, Z. Deposit date: 2012-07-01 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Structure-function analysis reveals a novel mechanism for regulation of histone demethylase LSD2/AOF1/KDM1b Cell Res., 23, 2013
4G3D	Crystal structure of human NF-kappaB inducing kinase (NIK) Descriptor: MAGNESIUM ION, NF-kappa-beta-inducing kinase Authors: Hymowitz, S.G, de Leon-Boenig, G. Deposit date: 2012-07-13 Release date: 2012-08-15 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.9 Å) Cite: The crystal structure of the catalytic domain of the NF-kappaB inducing kinase reveals a narrow but flexible active site. Structure, 20, 2012
4FWF	Complex structure of LSD2/AOF1/KDM1b with H3K4 mimic Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Histone H3.1, Lysine-specific histone demethylase 1B, ... Authors: Zhang, Q, Chen, Z. Deposit date: 2012-07-01 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structure-function analysis reveals a novel mechanism for regulation of histone demethylase LSD2/AOF1/KDM1b Cell Res., 23, 2013
4G5H	Crystal structure of capsular polysaccharide synthesizing enzyme CapE from Staphylococcus aureus in complex with by-product Descriptor: Capsular polysaccharide synthesis enzyme Cap8E, FORMIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... Authors: Miyafusa, T, Caaveiro, J.M.M, Tanaka, Y, Tsumoto, K. Deposit date: 2012-07-18 Release date: 2013-08-28 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Dynamic elements govern the catalytic activity of CapE, a capsular polysaccharide-synthesizing enzyme from Staphylococcus aureus. Febs Lett., 587, 2013
4G3C	Crystal structure of apo murine Nf-kappaB inducing kinase (NIK) Descriptor: NF-kappa-beta-inducing kinase, SULFATE ION Authors: Hymowitz, S.G, de Leon-Boenig, G. Deposit date: 2012-07-13 Release date: 2012-08-08 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.15 Å) Cite: The crystal structure of the catalytic domain of the NF-kappaB inducing kinase reveals a narrow but flexible active site. Structure, 20, 2012
4H5C	Crystal structure of human FPPS in ternary complex with YS0470 and inorganic phosphate Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, PHOSPHATE ION, ... Authors: Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M. Deposit date: 2012-09-18 Release date: 2012-12-26 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Ternary complex structures of human farnesyl pyrophosphate synthase bound with a novel inhibitor and secondary ligands provide insights into the molecular details of the enzyme's active site closure. Bmc Struct.Biol., 12, 2012
4GZ8	Mouse Semaphorin 3A, domains Sema-PSI-IG Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... Authors: Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y. Deposit date: 2012-09-06 Release date: 2012-10-17 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex. Nat.Struct.Mol.Biol., 19, 2012
4H5E	Crystal structure of human FPPS in ternary complex with YS0470 and isopentenyl pyrophosphate Descriptor: Farnesyl pyrophosphate synthase, ISOPENTYL PYROPHOSPHATE, MAGNESIUM ION, ... Authors: Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M. Deposit date: 2012-09-18 Release date: 2012-12-26 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Ternary complex structures of human farnesyl pyrophosphate synthase bound with a novel inhibitor and secondary ligands provide insights into the molecular details of the enzyme's active site closure. Bmc Struct.Biol., 12, 2012
4GOB	Low pH Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, Least Evolved Ancestor (LEA) Descriptor: Kaede-type Fluorescent Protein Authors: Kim, H, Grunkemeyer, T.J, Chen, L, Fromme, R, Wachter, R.M. Deposit date: 2012-08-19 Release date: 2013-07-31 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Acid-base catalysis and crystal structures of a least evolved ancestral GFP-like protein undergoing green-to-red photoconversion. Biochemistry, 52, 2013
4GPZ	Crystal structure of human B type phosphoglycerate mutase H11 phosphorylated form Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Phosphoglycerate mutase 1 Authors: He, C, Zhou, L, Zhang, L. Deposit date: 2012-08-22 Release date: 2013-05-22 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Tyr26 phosphorylation of PGAM1 provides a metabolic advantage to tumours by stabilizing the active conformation. Nat Commun, 4, 2013
4H5D	Crystal structure of human FPPS in ternary complex with YS0470 and inorganic pyrophosphate Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, PYROPHOSPHATE 2-, ... Authors: Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M. Deposit date: 2012-09-18 Release date: 2012-12-26 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Ternary complex structures of human farnesyl pyrophosphate synthase bound with a novel inhibitor and secondary ligands provide insights into the molecular details of the enzyme's active site closure. Bmc Struct.Biol., 12, 2012
4GZ9	Mouse Neuropilin-1, extracellular domains 1-4 (a1a2b1b2) Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y. Deposit date: 2012-09-06 Release date: 2012-10-17 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex. Nat.Struct.Mol.Biol., 19, 2012
4HPH	The crystal structure of isomaltulose synthase mutant E295Q from Erwinia rhapontici NX5 in complex with its natural substrate sucrose Descriptor: CALCIUM ION, GLYCEROL, Sucrose isomerase, ... Authors: Xu, Z, Li, S, Xu, H, Zhou, J. Deposit date: 2012-10-23 Release date: 2013-10-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.7 Å) Cite: The Structural Basis of Erwinia rhapontici Isomaltulose Synthase Plos One, 8, 2013
4HLY	The complex crystal structure of the DNA binding domain of vIRF-1 from the oncogenic KSHV with DNA Descriptor: 5'-D(*GP*CP*GP*TP*CP*GP*AP*GP*AP*CP*GP*C)-3', K9 Authors: Hew, K, Venkatachalam, R. Deposit date: 2012-10-17 Release date: 2013-03-13 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.48 Å) Cite: The crystal structure of the DNA-binding domain of vIRF-1 from the oncogenic KSHV reveals a conserved fold for DNA binding and reinforces its role as a transcription factor. Nucleic Acids Res., 41, 2013
4HOW	The crystal structure of isomaltulose synthase from Erwinia rhapontici NX5 Descriptor: CALCIUM ION, GLYCEROL, Sucrose isomerase Authors: Xu, Z, Li, S, Xu, H, Zhou, J. Deposit date: 2012-10-22 Release date: 2013-10-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.7 Å) Cite: The Structural Basis of Erwinia rhapontici Isomaltulose Synthase Plos One, 8, 2013
4HOZ	The crystal structure of isomaltulose synthase mutant D241A from Erwinia rhapontici NX5 in complex with D-glucose Descriptor: CALCIUM ION, GLYCEROL, Sucrose isomerase, ... Authors: Xu, Z, Li, S, Xu, H, Zhou, J. Deposit date: 2012-10-23 Release date: 2013-10-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2 Å) Cite: The Structural Basis of Erwinia rhapontici Isomaltulose Synthase Plos One, 8, 2013
4I01	Structure of the mutant Catabolite gen activator protein V140L Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator Authors: Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M.J. Deposit date: 2012-11-16 Release date: 2013-10-30 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors. Plos Biol., 11, 2013
4I0A	structure of the mutant Catabolite gene activator protein V132A Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL Authors: Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M.J. Deposit date: 2012-11-16 Release date: 2013-10-30 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors. Plos Biol., 11, 2013
4I09	structure of the mutant Catabolite gene activator protein V132L Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator Authors: Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M.J. Deposit date: 2012-11-16 Release date: 2013-10-30 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors. Plos Biol., 11, 2013
4HZF	structure of the wild type Catabolite gene Activator Protein Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL, ... Authors: Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M. Deposit date: 2012-11-15 Release date: 2013-10-30 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.48 Å) Cite: Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors. Plos Biol., 11, 2013
4I02	structure of the mutant Catabolite gene activator protein V140A Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator Authors: Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M.J. Deposit date: 2012-11-16 Release date: 2013-10-30 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors. Plos Biol., 11, 2013
4I1Q	Crystal Structure of hBRAP1 N-BAR domain Descriptor: Bridging integrator 2 Authors: Sanchez-Barrena, M.J. Deposit date: 2012-11-21 Release date: 2013-02-06 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.53 Å) Cite: Bin2 Is a Membrane Sculpting N-BAR Protein That Influences Leucocyte Podosomes, Motility and Phagocytosis Plos One, 7, 2012
4I0B	structure of the mutant Catabolite gene activator protein H160L Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator Authors: Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M.J. Deposit date: 2012-11-16 Release date: 2013-10-30 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors. Plos Biol., 11, 2013

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