Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7ZNS
DownloadVisualize
BU of 7zns by Molmil
Inactive D62N mutant of BT1760 Endo-acting levanase from Bacteroides thetaiotaomicron VPI-5482
Descriptor: Glycoside hydrolase family 32, SULFATE ION, beta-D-fructofuranose-(2-6)-beta-D-fructofuranose, ...
Authors:Basle, A, Bolam, D.
Deposit date:2022-04-21
Release date:2023-06-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
6JCH
DownloadVisualize
BU of 6jch by Molmil
Crystal structure of SpaE basal pilin from Lactobacillus rhamnosus GG - Orthorhombic form
Descriptor: Pilus assembly protein, SODIUM ION
Authors:Megta, A.K, Mishra, A.K, Palva, A, von Ossowski, I, Krishnan, V.
Deposit date:2019-01-28
Release date:2019-06-26
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.536 Å)
Cite:Crystal structure of basal pilin SpaE reveals the molecular basis of its incorporation in the lactobacillar SpaFED pilus.
J.Struct.Biol., 207, 2019
6D9M
DownloadVisualize
BU of 6d9m by Molmil
T4-Lysozyme fusion to Geobacter GGDEF
Descriptor: ACETATE ION, Fusion protein of Endolysin,Response receiver sensor diguanylate cyclase, GAF domain-containing, ...
Authors:Hallberg, Z, Doxzen, K, Kranzusch, P.J, Hammond, M.
Deposit date:2018-04-30
Release date:2019-04-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure and mechanism of a Hypr GGDEF enzyme that activates cGAMP signaling to control extracellular metal respiration.
Elife, 8, 2019
7AQ9
DownloadVisualize
BU of 7aq9 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583W
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.585 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7RAH
DownloadVisualize
BU of 7rah by Molmil
Adenylate cyclase toxin RTX domain fragment bound to M1H5 Fab and M2B10 Fab
Descriptor: Bifunctional adenylate cyclase toxin/hemolysin CyaA,Bifunctional adenylate cyclase toxin/hemolysin CyaA, CALCIUM ION, M1H5 Fab Heavy Chain, ...
Authors:Goldsmith, J.A, McLellan, J.S.
Deposit date:2021-07-01
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for antibody binding to adenylate cyclase toxin reveals RTX linkers as neutralization-sensitive epitopes.
Plos Pathog., 17, 2021
6DA1
DownloadVisualize
BU of 6da1 by Molmil
ETS1 in complex with synthetic SRR mimic
Descriptor: Protein C-ets-1, SULFATE ION, serine-rich region (SRR) peptide
Authors:Perez-Borrajero, C, Okon, M, Lin, C.S, Scheu, K, Murphy, M.E.P, Graves, B.J, McIntosh, L.P.
Deposit date:2018-05-01
Release date:2019-01-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.000127 Å)
Cite:The Biophysical Basis for Phosphorylation-Enhanced DNA-Binding Autoinhibition of the ETS1 Transcription Factor.
J. Mol. Biol., 431, 2019
8A45
DownloadVisualize
BU of 8a45 by Molmil
Structural analysis of 1-deoxy-D-xylulose 5-phosphate synthase from Pseudomonas aeruginosa with 2-acetyl thiamine diphosphate
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase, 2-ACETYL-THIAMINE DIPHOSPHATE, CALCIUM ION, ...
Authors:Hamid, R, Hirsch, A.
Deposit date:2022-06-10
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:1-deoxy-D-xylulose-5-phosphate synthase from Pseudomonas aeruginosa and Klebsiella pneumoniae reveals conformational changes upon cofactor binding.
J.Biol.Chem., 299, 2023
8A4D
DownloadVisualize
BU of 8a4d by Molmil
1-deoxy-D-xylulose 5-phosphate synthase from Pseudomonas aeruginosa with a thiamine analog inhibitor
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase, 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]phenyl}ethanol, CALCIUM ION, ...
Authors:Hamid, R, Hirsch, A.
Deposit date:2022-06-10
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:1-deoxy-D-xylulose-5-phosphate synthase from Pseudomonas aeruginosa and Klebsiella pneumoniae reveals conformational changes upon cofactor binding.
J.Biol.Chem., 299, 2023
6D48
DownloadVisualize
BU of 6d48 by Molmil
Cell Surface Receptor
Descriptor: Myeloid cell surface antigen CD33
Authors:Hermans, S.J, Miles, L.A, Parker, M.W.
Deposit date:2018-04-17
Release date:2019-04-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.776 Å)
Cite:Small Molecule Binding to Alzheimer Risk Factor CD33 Promotes A beta Phagocytosis.
Iscience, 19, 2019
7B34
DownloadVisualize
BU of 7b34 by Molmil
MST3 in complex with compound MRIA12
Descriptor: 1,2-ETHANEDIOL, 8-[(5-azanyl-1,3-dioxan-2-yl)methyl]-6-[2-chloranyl-4-(3-fluoranyl-6-methyl-pyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one, Serine/threonine-protein kinase 24
Authors:Tesch, R, Rak, M, Joerger, A.C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-11-28
Release date:2020-12-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Based Design of Selective Salt-Inducible Kinase Inhibitors.
J.Med.Chem., 64, 2021
6D41
DownloadVisualize
BU of 6d41 by Molmil
Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-17
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D4V
DownloadVisualize
BU of 6d4v by Molmil
M. thermoresistible GuaB2 delta-CBS in complex with inhibitor Compound 22 (VCC061422)
Descriptor: 2-cyclohexyl-1-{4-[(isoquinolin-5-yl)sulfonyl]piperazin-1-yl}ethan-1-one, INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase,Inosine-5'-monophosphate dehydrogenase
Authors:Ascher, D.B, Pacitto, A, Blundell, T.L.
Deposit date:2018-04-18
Release date:2019-05-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Synthesis and Structure-Activity relationship of 1-(5-isoquinolinesulfonyl)piperazine analogues as inhibitors of Mycobacterium tuberculosis IMPDH.
Eur.J.Med.Chem., 174, 2019
8A33
DownloadVisualize
BU of 8a33 by Molmil
Crystal structure of PpSB1-LOV-K117E mutant (light state)
Descriptor: Flavin mononucleotide (semi-quinone intermediate), Sensory box protein
Authors:Batra-Safferling, R, Granzin, J, Krauss, U.
Deposit date:2022-06-07
Release date:2023-07-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of PpSB1-LOV-K117E mutant (light state)
To Be Published
8T2B
DownloadVisualize
BU of 8t2b by Molmil
Crystal structure of SCV PTE G18C mutant RNA in complex with Fab BL3-6
Descriptor: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
Authors:Ojha, M, Koirala, D.
Deposit date:2023-06-05
Release date:2024-01-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structure of saguaro cactus virus 3' translational enhancer mimics 5' cap for eIF4E binding.
Proc.Natl.Acad.Sci.USA, 121, 2024
7AX2
DownloadVisualize
BU of 7ax2 by Molmil
Crystal structure of the computationally designed Scone-E protein co-crystallized with STA, form b
Descriptor: Keggin (STA), Monolacunary Keggin (STA), SODIUM ION, ...
Authors:Mylemans, B, Vandebroek, L, Parac-Vogt, T.N, Voet, A.R.D.
Deposit date:2020-11-09
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of Scone: pseudosymmetric folding of a symmetric designer protein.
Acta Crystallogr D Struct Biol, 77, 2021
7RMR
DownloadVisualize
BU of 7rmr by Molmil
Crystal structure of [I11L]cycloviolacin O2
Descriptor: D-[I11L]cycloviolacin O2, THIOCYANATE ION, [I11L]cycloviolacin O2
Authors:Huang, Y.H, Du, Q, Craik, D.J.
Deposit date:2021-07-28
Release date:2021-09-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Enabling Efficient Folding and High-Resolution Crystallographic Analysis of Bracelet Cyclotides.
Molecules, 26, 2021
8T2O
DownloadVisualize
BU of 8t2o by Molmil
Crystal structure of SCV PTE G18U RNA in complex with Fab BL3-6
Descriptor: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
Authors:Ojha, M, Koirala, D.
Deposit date:2023-06-06
Release date:2024-01-10
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structure of saguaro cactus virus 3' translational enhancer mimics 5' cap for eIF4E binding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8T2A
DownloadVisualize
BU of 8t2a by Molmil
Crystal structure of SCV PTE G18A mutant RNA in complex with Fab BL3-6
Descriptor: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
Authors:Ojha, M, Koirala, D.
Deposit date:2023-06-05
Release date:2024-01-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Structure of saguaro cactus virus 3' translational enhancer mimics 5' cap for eIF4E binding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8A5K
DownloadVisualize
BU of 8a5k by Molmil
Structural analysis of 1-deoxy-D-xylulose 5-phosphate synthase from Pseudomonas aeruginosa and Klebsiella pneumoniae reveals conformational changes upon cofactor binding
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase, CALCIUM ION, GLYCEROL, ...
Authors:Hamid, R, Hirsch, A.
Deposit date:2022-06-15
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:1-deoxy-D-xylulose-5-phosphate synthase from Pseudomonas aeruginosa and Klebsiella pneumoniae reveals conformational changes upon cofactor binding.
J.Biol.Chem., 299, 2023
7RIJ
DownloadVisualize
BU of 7rij by Molmil
[I11G]hyen D
Descriptor: ACETATE ION, Cyclotide hyen-D, D-[I11L]hyen D
Authors:Du, Q, Huang, Y.H, Wang, C.K, Craik, D.J.
Deposit date:2021-07-20
Release date:2021-09-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Enabling efficient folding and high-resolution crystallographic analysis of bracelet cyclotides
Molecules, 26(18), 2021
7AF1
DownloadVisualize
BU of 7af1 by Molmil
The structure of Artemis/SNM1C/DCLRE1C with 2 Zinc ions
Descriptor: 1,2-ETHANEDIOL, Protein artemis, ZINC ION
Authors:Yosaatmadja, Y, Goubin, S, Newman, J.A, Mukhopadhyay, S.M.M, Dannerfjord, A.A, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Bountra, C, Gileadi, O.
Deposit date:2020-09-19
Release date:2020-10-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and mechanistic insights into the Artemis endonuclease and strategies for its inhibition.
Nucleic Acids Res., 49, 2021
7RIH
DownloadVisualize
BU of 7rih by Molmil
hyen D
Descriptor: CITRATE ANION, Cyclotide hyen-D, D-[I11L]hyen D
Authors:Du, Q, Huang, Y.H, Craik, D.J, Wang, C.K.
Deposit date:2021-07-20
Release date:2021-09-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Enabling efficient folding and high-resolution crystallographic analysis of bracelet cyclotides
Molecules, 26(18), 2021
8A37
DownloadVisualize
BU of 8a37 by Molmil
Crystal structure of PpSB1-LOV-K117E mutant (dark state), tetragonal form
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Batra-Safferling, R, Granzin, J.
Deposit date:2022-06-07
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of PpSB1-LOV-K117E mutant (dark state), tetragonal form
To Be Published
7B1I
DownloadVisualize
BU of 7b1i by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikF with the HMA domain of OsHIPP19 from rice (Oryza sativa)
Descriptor: AVR-Pik protein, OSIGBa0128P10.9 protein
Authors:Maidment, J.H.R, Franceschetti, M, Banfield, M.J.
Deposit date:2020-11-24
Release date:2021-02-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Multiple variants of the fungal effector AVR-Pik bind the HMA domain of the rice protein OsHIPP19, providing a foundation to engineer plant defense.
J.Biol.Chem., 296, 2021
8T29
DownloadVisualize
BU of 8t29 by Molmil
Crystal structure of SCV PTE RNA in complex with Fab BL3-6
Descriptor: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
Authors:Ojha, M, Koirala, D.
Deposit date:2023-06-05
Release date:2024-01-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Structure of saguaro cactus virus 3' translational enhancer mimics 5' cap for eIF4E binding.
Proc.Natl.Acad.Sci.USA, 121, 2024

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon