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2LU0
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BU of 2lu0 by Molmil
NMR solution structure of the kappa-zeta region of S.cerevisiae group II intron ai5(gamma)
Descriptor: RNA (49-MER)
Authors:Donghi, D, Pechlaner, M, Finazzo, C, Knobloch, B, Sigel, R.K.O.
Deposit date:2012-06-05
Release date:2013-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structural stabilization of the kappa three-way junction by Mg(II) represents the first step in the folding of a group II intron.
Nucleic Acids Res., 41, 2013
2LWJ
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BU of 2lwj by Molmil
NMR solution structure Myxoccoccus xanthus CdnL
Descriptor: Transcriptional regulator, CarD family
Authors:Jimenez, M, Padmanabhan, S, Mirassou, Y.
Deposit date:2012-08-01
Release date:2014-02-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL.
Plos One, 9, 2014
5ZUB
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BU of 5zub by Molmil
Crystal structure of MERS-CoV macro domain in complex with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ORF1a
Authors:Lin, M.-H, Cho, C.-C, Chien, C.-Y, Hsu, C.-H.
Deposit date:2018-05-07
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.677 Å)
Cite:Crystal structure of MERS-CoV macro domain in complex with NAD
To Be Published
2M58
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BU of 2m58 by Molmil
Structure of 2'-5' AG1 lariat forming ribozyme in its inactive state
Descriptor: RNA (59-MER)
Authors:Carlomagno, T, Amata, I, Codutti, L, Falb, M, Fohrer, J, Simon, B.
Deposit date:2013-02-18
Release date:2013-04-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural principles of RNA catalysis in a 2'-5' lariat-forming ribozyme.
J.Am.Chem.Soc., 135, 2013
2M1L
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BU of 2m1l by Molmil
Solution NMR Structure of Cyclin-dependent kinase 2-associated protein 2 (CDK2AP2, DOC-1R) from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR8910C
Descriptor: Cyclin-dependent kinase 2-associated protein 2
Authors:Ertekin, A, Janjua, H, Kohan, E, Shastry, R, Pederson, K, Prestegard, J.H, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-11-30
Release date:2013-01-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of CDK2-associated protein 2 (CDK2AP2, Deleted in Oral Cancer 1 Related protein, DOC-1R)
To be Published
2M6V
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BU of 2m6v by Molmil
Solution NMR structure of the d(GGGTTGGGTTTTGGGTGGG) quadruplex in sodium conditions
Descriptor: DNA (5'-D(*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*TP*GP*GP*G)-3')
Authors:Karsisiotis, A.I, Webba da Silva, M.
Deposit date:2013-04-10
Release date:2014-07-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
2M3M
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BU of 2m3m by Molmil
Solution structure of a complex consisting of hDlg/SAP-97 residues 318-406 and HPV51 oncoprotein E6 residues 141-151
Descriptor: Disks large homolog 1, Protein E6
Authors:Mischo, A, Ohlenschlager, O, Gorlach, M.
Deposit date:2013-01-22
Release date:2013-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural insights into a wildtype domain of the oncoprotein E6 and its interaction with a PDZ domain.
Plos One, 8, 2013
5ZZ8
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BU of 5zz8 by Molmil
Structure of the Herpes simplex virus type 2 C-capsid with capsid-vertex-specific component
Descriptor: Major capsid protein, UL17, UL25, ...
Authors:Wang, J.L, Yuan, S, Zhu, D.J, Tang, H, Wang, N, Chen, W.Y, Gao, Q, Li, Y.H, Wang, J.Z, Liu, H.R, Zhang, X.Z, Rao, Z.H, Wang, X.X.
Deposit date:2018-05-31
Release date:2018-10-10
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Structure of the herpes simplex virus type 2 C-capsid with capsid-vertex-specific component.
Nat Commun, 9, 2018
6A07
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BU of 6a07 by Molmil
Salmonella Typhi YfdX in the F222 space group at 1.5 A resolution
Descriptor: CHLORIDE ION, SODIUM ION, YfdX protein
Authors:Ku, B, Lee, H.S, Kim, S.J.
Deposit date:2018-06-05
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structural and Physiological Exploration ofSalmonellaTyphi YfdX Uncovers Its Dual Function in Bacterial Antibiotic Stress and Virulence.
Front Microbiol, 9, 2018
6A12
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BU of 6a12 by Molmil
X-ray structure of lipase from Geobacillus thermoleovorans
Descriptor: CALCIUM ION, Lipase, ZINC ION
Authors:Moharana, T.R, Pal, B, Rao, N.M.
Deposit date:2018-06-06
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.145 Å)
Cite:X-ray structure and characterization of a thermostable lipase from Geobacillus thermoleovorans.
Biochem. Biophys. Res. Commun., 508, 2019
4XI9
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BU of 4xi9 by Molmil
Human OGT in complex with UDP-5S-GlcNAc and substrate peptide (RBL2)
Descriptor: (2S,3R,4R,5S,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate, Retinoblastoma-like protein 2, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Authors:Schimpl, M, van Aalten, D.M.F.
Deposit date:2015-01-06
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The active site of O-GlcNAc transferase imposes constraints on substrate sequence.
Nat.Struct.Mol.Biol., 22, 2015
4XBM
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BU of 4xbm by Molmil
X-ray crystal structure of Notch ligand Delta-like 1
Descriptor: Delta-like protein 1, alpha-L-fucopyranose
Authors:Kershaw, N.J, Burgess, A.W, Church, N.L, Luo, C.S, Adam, T.E.
Deposit date:2014-12-17
Release date:2015-03-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Notch ligand delta-like1: X-ray crystal structure and binding affinity.
Biochem.J., 468, 2015
6AAO
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BU of 6aao by Molmil
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with TCO*Lys
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Yanagisawa, T, Kuratani, M, Yokoyama, S.
Deposit date:2018-07-18
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.403 Å)
Cite:Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.
Cell Chem Biol, 26, 2019
6AB0
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BU of 6ab0 by Molmil
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with pAmPyLys
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, N6-{[(6-aminopyridin-3-yl)methoxy]carbonyl}-L-lysine, ...
Authors:Yanagisawa, T, Kuratani, M, Yokoyama, S.
Deposit date:2018-07-19
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.441 Å)
Cite:Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.
Cell Chem Biol, 26, 2019
5ZRE
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BU of 5zre by Molmil
Tyrosinase from Burkholderia thailandensis (BtTYR) at high pH condition
Descriptor: COPPER (II) ION, GLYCEROL, OXYGEN ATOM, ...
Authors:Lee, S, Son, H.-F, Kim, K.-J.
Deposit date:2018-04-24
Release date:2018-10-31
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Highly Efficient Production of Catechol Derivatives at Acidic pH by Tyrosinase from Burkholderia thailandensis
Acs Catalysis, 8, 2018
2LV2
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BU of 2lv2 by Molmil
Solution NMR structure of C2H2-type Zinc-fingers 4 and 5 from human Insulinoma-associated protein 1 (fragment 424-497), Northeast Structural Genomics Consortium Target HR7614B
Descriptor: Insulinoma-associated protein 1, ZINC ION
Authors:Yang, Y, Ramelot, T.A, Cort, J.R, Shastry, R, Kohan, E, Janjua, H, Xiao, R, Acton, T, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-06-27
Release date:2012-10-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of C2H2-type Zinc-fingers 4 and 5 from human Insulinoma-associated protein 1 (fragment 424-497), Northeast Structural Genomics Consortium Target HR7614B (CASP Target)
To be Published
2LV0
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BU of 2lv0 by Molmil
Solution Structure of Helix-35 Stem-loop from E. coli 23S rRNA
Descriptor: RNA (5'-R(*GP*GP*GP*CP*UP*AP*AP*UP*GP*UP*UP*GP*AP*AP*AP*AP*AP*UP*UP*AP*GP*CP*CP*C)-3')
Authors:Nikonowicz, E.P, Wang, J, Moran, S, Donarski, J.
Deposit date:2012-06-26
Release date:2013-06-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of Helix-35 Stem-loop from E. coli 23S rRNA
To be Published
2LW1
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BU of 2lw1 by Molmil
The C-terminal domain of the Uup protein is a DNA-binding coiled coil motif
Descriptor: ABC transporter ATP-binding protein uup
Authors:Carlier, L, Haase, A.S, Burgos Zepeda, M.Y, Dassa, E, Lequin, O.
Deposit date:2012-07-19
Release date:2012-09-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The C-terminal domain of the Uup protein is a DNA-binding coiled coil motif.
J.Struct.Biol., 180, 2012
2M3V
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BU of 2m3v by Molmil
Solution structure of tyrosine phosphatase related to biofilm formation A (TpbA) from Pseudomonas aeruginosa
Descriptor: Putative uncharacterized protein
Authors:Koveal, D, Peti, W, Page, R.
Deposit date:2013-01-26
Release date:2013-04-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ligand Binding Reduces Conformational Flexibility in the Active Site of Tyrosine Phosphatase Related to Biofilm Formation A (TpbA) from Pseudomonasaeruginosa.
J.Mol.Biol., 425, 2013
6A9D
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BU of 6a9d by Molmil
Crystal structure of the strigolactone receptor ShHTL7 from Striga hermonthica
Descriptor: GLYCEROL, Hyposensitive to light 7
Authors:Zhang, Y.Y, Xi, Z, Wang, D.W.
Deposit date:2018-07-13
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Crystal structure of the strigolactone receptor ShHTL5 from Striga hermonthica
To Be Published
4XJX
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BU of 4xjx by Molmil
STRUCTURE OF MUTANT (E165H) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, HsdR, MAGNESIUM ION
Authors:Baikova, T, Stsiapanava, A, Moche, M, Degtjarik, O, Kuta-Smatanova, I, Ettrich, R.
Deposit date:2015-01-09
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:STRUCTURE OF MUTANT (E165H) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
To Be Published
6AA2
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BU of 6aa2 by Molmil
X-ray structure of ReQy1 (oxidized form)
Descriptor: Green fluorescent protein
Authors:Sugiura, K, Yasuda, A, Tabushi, N, Tanaka, H, Kurisu, G, Hisabori, T.
Deposit date:2018-07-17
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multicolor redox sensor proteins can visualize redox changes in various compartments of the living cell.
Biochim Biophys Acta Gen Subj, 1863, 2019
4Y2D
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BU of 4y2d by Molmil
Crystal structure of the mCD1d/7DW8-5/iNKTCR ternary complex
Descriptor: 11-(4-fluorophenyl)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]undecanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zajonc, D.M, Yu, E.D.
Deposit date:2015-02-09
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural modifications of alphaGalCer in both lipid and carbohydrate moiety influence activation of murine and human iNKT cells
To Be Published
6AAP
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BU of 6aap by Molmil
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with ZaeSeCys
Descriptor: 3-[(2-{[(benzyloxy)carbonyl]amino}ethyl)selanyl]-L-alanine, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Yanagisawa, T, Kuratani, M, Yokoyama, S.
Deposit date:2018-07-18
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.
Cell Chem Biol, 26, 2019
4XNF
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BU of 4xnf by Molmil
Tailspike protein double mutant D339A/E372Q of E. coli bacteriophage HK620
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, SODIUM ION, ...
Authors:Gohlke, U, Broeker, N.K, Heinemann, U, Seckler, R, Barbirz, S.
Deposit date:2015-01-15
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Enthalpic cost of water removal from a hydrophobic glucose binding cavity on HK620 tailspike protein.
to be published

223790

PDB entries from 2024-08-14

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