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6Z40
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BU of 6z40 by Molmil
NMR solution structure of the carbohydrate-binding module family 5 (CBM5) from Cellvibrio japonicus CjLPMO10A
Descriptor: Carbohydrate binding protein, putative, cpb33A
Authors:Madland, E, Aachmann, F.L, Courtade, G.
Deposit date:2020-05-22
Release date:2021-05-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and functional variation of chitin-binding domains of a lytic polysaccharide monooxygenase from Cellvibrio japonicus.
J.Biol.Chem., 297, 2021
8VRC
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BU of 8vrc by Molmil
Tetrahymena thermophila MLP1 RRM domain
Descriptor: LA motif RNA-binding domain protein
Authors:Donaldson, L.W.
Deposit date:2024-01-21
Release date:2024-09-04
Method:SOLUTION NMR
Cite:NMR structure of the second RNA binding domain from Tetrahymena thermophila Mlp1
To Be Published
3AYW
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BU of 3ayw by Molmil
Crystal Structure of Human Nucleosome Core Particle Containing H3K56Q mutation
Descriptor: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ...
Authors:Iwasaki, W, Tachiwana, H, Kawaguchi, K, Shibata, T, Kagawa, W, Kurumizaka, H.
Deposit date:2011-05-19
Release date:2011-09-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Comprehensive Structural Analysis of Mutant Nucleosomes Containing Lysine to Glutamine (KQ) Substitutions in the H3 and H4 Histone-Fold Domains
Biochemistry, 50, 2011
3AZI
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BU of 3azi by Molmil
Crystal Structure of Human Nucleosome Core Particle Containing H4K31Q mutation
Descriptor: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ...
Authors:Iwasaki, W, Tachiwana, H, Kawaguchi, K, Shibata, T, Kagawa, W, Kurumizaka, H.
Deposit date:2011-05-25
Release date:2011-09-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Comprehensive Structural Analysis of Mutant Nucleosomes Containing Lysine to Glutamine (KQ) Substitutions in the H3 and H4 Histone-Fold Domains
Biochemistry, 50, 2011
6LTN
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BU of 6ltn by Molmil
cryo-EM structure of C-terminal truncated human Pannexin1
Descriptor: Pannexin-1
Authors:Mou, L.Q, Ke, M, Xiao, Q.J, Wu, J.P, Deng, D.
Deposit date:2020-01-23
Release date:2020-05-13
Last modified:2020-05-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for gating mechanism of Pannexin 1 channel.
Cell Res., 30, 2020
6QYS
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BU of 6qys by Molmil
Solution NMR of synthetic analogues of nisin and mutacin ring A and ring B - Nisin Ring B
Descriptor: DBB-PRO-GLY-CYS-LYS
Authors:Dickman, R, Mitchell, S.A, Figueiredo, A, Hansen, D.F, Tabor, A.B.
Deposit date:2019-03-09
Release date:2019-09-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular Recognition of Lipid II by Lantibiotics: Synthesis and Conformational Studies of Analogues of Nisin and Mutacin Rings A and B.
J.Org.Chem., 84, 2019
7B2F
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BU of 7b2f by Molmil
Solution structure of the Pax NRPS docking domain PaxB NDD
Descriptor: Peptide synthetase XpsB (Modular protein)
Authors:Watzel, J, Sarawi, S, Duchardt-Ferner, E, Bode, H.B, Woehnert, J.
Deposit date:2020-11-26
Release date:2021-06-09
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Cooperation between a T Domain and a Minimal C-Terminal Docking Domain to Enable Specific Assembly in a Multiprotein NRPS.
Angew.Chem.Int.Ed.Engl., 60, 2021
7ATY
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BU of 7aty by Molmil
Solution NMR structure of the SH3 domain of human Caskin1
Descriptor: Caskin-1
Authors:Toke, O, Koprivanacz, K, Radnai, L, Mero, B, Juhasz, T, Liliom, K, Buday, L.
Deposit date:2020-11-01
Release date:2021-02-03
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution NMR Structure of the SH3 Domain of Human Caskin1 Validates the Lack of a Typical Peptide Binding Groove and Supports a Role in Lipid Mediator Binding.
Cells, 10, 2021
6LY8
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BU of 6ly8 by Molmil
V/A-ATPase from Thermus thermophilus, the soluble domain, including V1, d, two EG stalks, and N-terminal domain of a-subunit.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
Authors:Kishikawa, J, Nakanishi, A, Furuta, A, Kato, T, Namba, K, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
Deposit date:2020-02-13
Release date:2020-09-09
Last modified:2020-09-30
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanical inhibition of isolated V o from V/A-ATPase for proton conductance.
Elife, 9, 2020
3AZM
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BU of 3azm by Molmil
Crystal Structure of Human Nucleosome Core Particle Containing H4K79Q mutation
Descriptor: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ...
Authors:Iwasaki, W, Tachiwana, H, Kawaguchi, K, Shibata, T, Kagawa, W, Kurumizaka, H.
Deposit date:2011-05-25
Release date:2011-09-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Comprehensive Structural Analysis of Mutant Nucleosomes Containing Lysine to Glutamine (KQ) Substitutions in the H3 and H4 Histone-Fold Domains
Biochemistry, 50, 2011
6M71
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BU of 6m71 by Molmil
SARS-Cov-2 RNA-dependent RNA polymerase in complex with cofactors
Descriptor: Non-structural protein 7, Non-structural protein 8, RNA-directed RNA polymerase
Authors:Gao, Y, Yan, L, Huang, Y, Liu, F, Cao, L, Wang, T, Wang, Q, Lou, Z, Rao, Z.
Deposit date:2020-03-16
Release date:2020-04-01
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of the RNA-dependent RNA polymerase from COVID-19 virus.
Science, 368, 2020
6GSF
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BU of 6gsf by Molmil
Solution structure of lipase binding domain LID1 of foldase from Pseudomonas aeruginosa
Descriptor: Lipase chaperone
Authors:Viegas, A, Jaeger, K.-E, Etzkorn, M, Gohlke, H, Verma, N, Dollinger, P, Kovacic, F.
Deposit date:2018-06-14
Release date:2018-12-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and dynamic insights revealing how lipase binding domain MD1 of Pseudomonas aeruginosa foldase affects lipase activation.
Sci Rep, 10, 2020
6T15
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BU of 6t15 by Molmil
The III2-IV(5B)1 respiratory supercomplex from S. cerevisiae
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, CARDIOLIPIN, COPPER (II) ION, ...
Authors:Marechal, A, Pinotsis, N, Hartley, A.
Deposit date:2019-10-03
Release date:2020-04-22
Last modified:2020-05-06
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Rcf2 revealed in cryo-EM structures of hypoxic isoforms of mature mitochondrial III-IV supercomplexes.
Proc.Natl.Acad.Sci.USA, 117, 2020
6MZV
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BU of 6mzv by Molmil
Cryo-EM structure of the HO BMC shell: BMC-TD focused structure, widened inner ring
Descriptor: Microcompartments protein
Authors:Greber, B.J, Sutter, M, Kerfeld, C.A.
Deposit date:2018-11-05
Release date:2019-03-13
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The Plasticity of Molecular Interactions Governs Bacterial Microcompartment Shell Assembly.
Structure, 27, 2019
6MTB
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BU of 6mtb by Molmil
Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Brown, A, Baird, M.R, Yip, M.C.J, Murray, J, Shao, S.
Deposit date:2018-10-19
Release date:2018-11-21
Last modified:2019-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structures of translationally inactive mammalian ribosomes.
Elife, 7, 2018
8W15
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BU of 8w15 by Molmil
HTT in complex with HAP40 in the apo state.
Descriptor: 40-kDa huntingtin-associated protein, Huntingtin
Authors:Poweleit, N, Boudet, J, Doherty, E.
Deposit date:2024-02-15
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Discovery of a Small Molecule Ligand to the Huntingtin/HAP40 complex
To Be Published
6LVB
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BU of 6lvb by Molmil
Structure of Dimethylformamidase, tetramer
Descriptor: FE (III) ION, N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit
Authors:Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R.
Deposit date:2020-02-02
Release date:2020-06-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.
Angew.Chem.Int.Ed.Engl., 59, 2020
1CE5
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BU of 1ce5 by Molmil
BOVINE PANCREAS BETA-TRYPSIN IN COMPLEX WITH BENZAMIDINE
Descriptor: BENZAMIDINE, CALCIUM ION, CHLORIDE ION, ...
Authors:Ota, N, Stroupe, C, Ferreira-Da-Silva, J.M.S, Shah, S.S, Mares-Guia, M, Brunger, A.T.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Non-Boltzmann thermodynamic integration (NBTI) for macromolecular systems: relative free energy of binding of trypsin to benzamidine and benzylamine.
Proteins, 37, 1999
8SQB
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BU of 8sqb by Molmil
The cryo-EM structure of the EcBAM/EspP(beta7-12) complex
Descriptor: Maltodextrin-binding protein,EspP(b7-12), Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Wu, R, Noinaj, N.
Deposit date:2023-05-04
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:BAM orchestrates OMP biogenesis using a beta-templating mechanism
To Be Published
5OMZ
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BU of 5omz by Molmil
Solution structure of domain III (DIII)of Zika virus Envelope protein
Descriptor: Envelope Protein
Authors:Zerbe, O, Bardelli, M.
Deposit date:2017-08-02
Release date:2017-10-04
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A Human Bi-specific Antibody against Zika Virus with High Therapeutic Potential.
Cell, 171, 2017
6I8O
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BU of 6i8o by Molmil
Dye type peroxidase Aa from Streptomyces lividans: 39.2kGy structure
Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L.
Deposit date:2018-11-20
Release date:2019-07-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.
Iucrj, 6, 2019
6SKO
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BU of 6sko by Molmil
Cryo-EM Structure of the Fork Protection Complex Bound to CMG at a Replication Fork - conformation 2 MCM CTD:ssDNA
Descriptor: DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, DNA replication licensing factor MCM4, ...
Authors:Yeeles, J, Baretic, D, Jenkyn-Bedford, M.
Deposit date:2019-08-16
Release date:2020-05-06
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM Structure of the Fork Protection Complex Bound to CMG at a Replication Fork.
Mol.Cell, 78, 2020
6MZX
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BU of 6mzx by Molmil
Cryo-EM structure of the HO BMC shell: Icosahedral reconstruction (main population)
Descriptor: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml, Microcompartments protein HO-5815, Microcompartments protein HO-5816
Authors:Greber, B.J, Sutter, M, Kerfeld, C.A.
Deposit date:2018-11-06
Release date:2019-03-13
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The Plasticity of Molecular Interactions Governs Bacterial Microcompartment Shell Assembly.
Structure, 27, 2019
6N07
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BU of 6n07 by Molmil
Structure of the HO BMC shell: BMC-TD focused map, open inner pore, compacted shell
Descriptor: Microcompartments protein
Authors:Greber, B.J, Sutter, M, Kerfeld, C.A.
Deposit date:2018-11-06
Release date:2019-03-13
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The Plasticity of Molecular Interactions Governs Bacterial Microcompartment Shell Assembly.
Structure, 27, 2019
6MTC
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BU of 6mtc by Molmil
Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Brown, A, Baird, M.R, Yip, M.C.J, Murray, J, Shao, S.
Deposit date:2018-10-19
Release date:2018-11-21
Last modified:2019-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of translationally inactive mammalian ribosomes.
Elife, 7, 2018

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