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8R60
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BU of 8r60 by Molmil
1918 H1N1 Viral polymerase heterotrimer in complex with 4 repeat serine-5 phosphorylated PolII peptide
Descriptor: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(P*AP*GP*UP*AP*GP*AP*AP*AP*CP*AP*AP*GP*GP*CP*C)-3'), ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2023-11-19
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:1918 H1N1 Viral polymerase heterotrimer in complex with 4 repeat serine-5 phosphorylated PolII peptide
To Be Published
8R65
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BU of 8r65 by Molmil
1918 H1N1 Viral polymerase heterotrimer in complex with 4 repeat serine-5 phosphorylated PolII peptide with ordered PB2 C-terminal domains
Descriptor: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(P*AP*GP*UP*AP*GP*AP*AP*AP*CP*AP*AP*GP*GP*CP*C)-3'), ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2023-11-20
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (4.23 Å)
Cite:1918 H1N1 Viral polymerase heterotrimer in complex with 4 repeat serine-5 phosphorylated PolII peptide with ordered PB2 C-terminal domains
To Be Published
4QVD
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BU of 4qvd by Molmil
E.coli Hfq in complex with RNA Ads
Descriptor: RNA (5'-R(*AP*AP*CP*UP*AP*AP*A)-3'), RNA-binding protein Hfq
Authors:Wang, L.J, Wang, W.W, Li, F.D, Wu, J.H, Gong, Q.G, Shi, Y.Y.
Deposit date:2014-07-14
Release date:2015-05-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.972 Å)
Cite:Structural insights into the recognition of the internal A-rich linker from OxyS sRNA by Escherichia coli Hfq
Nucleic Acids Res., 43, 2015
7OM6
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BU of 7om6 by Molmil
Thosea asigna virus RdRP domain in complex with RNA
Descriptor: DI(HYDROXYETHYL)ETHER, RNA (5'-R(P*AP*AP*AP*UP*UP*U)-3'), RNA-dependent RNA polymerase
Authors:Ferrero, D.S, Falqui, M, Verdaguer, N.
Deposit date:2021-05-21
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
7OM7
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BU of 7om7 by Molmil
Thosea asigna virus RdRP domain in complex with RNA and nucleotide UMPNPP
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
Authors:Ferrero, D.S, Falqui, M, Verdaguer, N.
Deposit date:2021-05-21
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
7YER
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BU of 7yer by Molmil
The structure of EBOV L-VP35 complex
Descriptor: Polymerase cofactor VP35, RNA-directed RNA polymerase L, ZINC ION
Authors:Shi, Y, Yuan, B, Peng, Q.
Deposit date:2022-07-06
Release date:2022-10-05
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the Ebola virus polymerase complex.
Nature, 610, 2022
3W1K
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BU of 3w1k by Molmil
Crystal structure of the selenocysteine synthase SelA and tRNASec complex
Descriptor: L-seryl-tRNA(Sec) selenium transferase, selenocysteine tRNA
Authors:Itoh, Y, Sekine, S, Yokoyama, S.
Deposit date:2012-11-15
Release date:2013-06-05
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (7.5 Å)
Cite:Decameric SelA-tRNA(Sec) ring structure reveals mechanism of bacterial selenocysteine formation
Science, 340, 2013
8R6W
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BU of 8r6w by Molmil
Structure of the SFTSV L protein in a transcription-priming state with bound capped RNA [TRANSCRIPTION-PRIMING]
Descriptor: RNA (5'-R(*(M7G)*AP*AP*A)-3'), RNA (5'-R(*AP*CP*AP*C)-3'), RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*CP*AP*G)-3'), ...
Authors:Williams, H.M, Thorkelsson, S.R, Vogel, D, Busch, C, Milewski, M, Cusack, S, Grunewald, K, Quemin, E.R.J, Rosenthal, M.
Deposit date:2023-11-23
Release date:2024-04-24
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural snapshots of phenuivirus cap-snatching and transcription.
Nucleic Acids Res., 52, 2024
8YXP
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BU of 8yxp by Molmil
Structure of mumps virus L protein (state2)
Descriptor: RNA-directed RNA polymerase L, ZINC ION
Authors:Li, T.H, Shen, Q.T.
Deposit date:2024-04-02
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structures of the mumps virus polymerase complex via cryo-electron microscopy.
Nat Commun, 15, 2024
8YXL
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BU of 8yxl by Molmil
Structure of C-terminal domain of L protein from Mumps virus
Descriptor: RNA-directed RNA polymerase L
Authors:Li, T.H, Shen, Q.T.
Deposit date:2024-04-02
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structures of the mumps virus polymerase complex via cryo-electron microscopy.
Nat Commun, 15, 2024
8G6R
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BU of 8g6r by Molmil
Porcine epidemic diarrhea virus core polymerase complex
Descriptor: RNA (5'-R(P*AP*AP*GP*AP*AP*GP*CP*UP*AP*UP*UP*AP*AP*AP*AP*UP*CP*AP*CP*A)-3'), RNA (5'-R(P*GP*GP*UP*UP*GP*UP*GP*AP*UP*UP*UP*UP*AP*AP*UP*AP*GP*CP*UP*U)-3'), ZINC ION, ...
Authors:Anderson, T.K, Kirchdoerfer, R.N.
Deposit date:2023-02-15
Release date:2023-03-29
Last modified:2023-10-04
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:An alphacoronavirus polymerase structure reveals conserved co-factor functions.
Biorxiv, 2023
3KYH
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BU of 3kyh by Molmil
Saccharomyces cerevisiae Cet1-Ceg1 capping apparatus
Descriptor: mRNA-capping enzyme subunit alpha, mRNA-capping enzyme subunit beta
Authors:Lima, C.D.
Deposit date:2009-12-06
Release date:2010-02-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Saccharomyces cerevisiae Cet1-Ceg1 mRNA Capping Apparatus.
Structure, 18, 2010
8P1N
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BU of 8p1n by Molmil
Structure of hantaan orthohantavirus (HTNV) polymerase bound to 5'vRNA
Descriptor: RNA (5'-R(P*AP*GP*UP*AP*G)-3'), RNA-directed RNA polymerase L
Authors:Keown, J.R, Carrique, L, Grimes, J.M.
Deposit date:2023-05-12
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Structure of hantaan orthohantavirus (HTNV) polymerase bound to 5'vRNA
To Be Published
8P1J
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BU of 8p1j by Molmil
Structure of hantaan orthohantavirus (HTNV) polymerase - Apo core
Descriptor: RNA-directed RNA polymerase L
Authors:Keown, J.R, Carrique, L, Grimes, J.M.
Deposit date:2023-05-12
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Structure of hantaan orthohantavirus (HTNV) polymerase - Apo core
To Be Published
8P1K
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BU of 8p1k by Molmil
Structure of hantaan orthohantavirus (HTNV) polymerase - Apo core endonuclease
Descriptor: RNA-directed RNA polymerase L
Authors:Keown, J.R, Carrique, L, Grimes, J.M.
Deposit date:2023-05-12
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structure of hantaan orthohantavirus (HTNV) polymerase - Apo core endonuclease
To Be Published
8P1L
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BU of 8p1l by Molmil
Structure of hantaan orthohantavirus (HTNV) polymerase - Apo full length
Descriptor: RNA-directed RNA polymerase L
Authors:Keown, J.R, Carrique, L, Grimes, J.M.
Deposit date:2023-05-12
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of hantaan orthohantavirus (HTNV) polymerase - Apo full length
To Be Published
8URB
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BU of 8urb by Molmil
Porcine epidemic diarrhea virus complete core polymerase complex
Descriptor: RNA (33-MER), RNA (55-MER), ZINC ION, ...
Authors:Anderson, T.K, Kirchdoerfer, R.N.
Deposit date:2023-10-25
Release date:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:An alphacoronavirus polymerase structure reveals conserved co-factor functions.
Biorxiv, 2023
7QDY
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BU of 7qdy by Molmil
RNA-bound human SKI complex
Descriptor: Helicase SKI2W, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3'), Tetratricopeptide repeat protein 37, ...
Authors:Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E.
Deposit date:2021-12-01
Release date:2022-02-09
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
1N53
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BU of 1n53 by Molmil
SOLUTION STRUCTURE OF B. SUBTILIS T BOX ANTITERMINATOR RNA
Descriptor: RNA (5'-R(*GP*AP*GP*GP*GP*UP*GP*GP*AP*AP*CP*CP*GP*CP*GP*C)-3'), RNA (5'-R(*GP*CP*GP*UP*CP*CP*CP*UP*C)-3')
Authors:Gerdeman, M.S, Henkin, T.M, Hines, J.V.
Deposit date:2002-11-04
Release date:2003-04-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the Bacillus subtilis T-box Antiterminator RNA: Seven Nucleotide Bulge Characterized by Stacking and Flexibility
J.Mol.Biol., 326, 2003
3ADD
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BU of 3add by Molmil
Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and AMPPNP (crystal type 3)
Descriptor: L-seryl-tRNA(Sec) kinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Itoh, Y, Chiba, S, Sekine, S, Yokoyama, S.
Deposit date:2010-01-18
Release date:2010-07-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for the Major Role of O-Phosphoseryl-tRNA Kinase in the UGA-Specific Encoding of Selenocysteine
Mol.Cell, 39, 2010
3ADC
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BU of 3adc by Molmil
Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and AMPPNP (crystal type 2)
Descriptor: L-seryl-tRNA(Sec) kinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Itoh, Y, Chiba, S, Sekine, S, Yokoyama, S.
Deposit date:2010-01-18
Release date:2010-07-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis for the Major Role of O-Phosphoseryl-tRNA Kinase in the UGA-Specific Encoding of Selenocysteine
Mol.Cell, 39, 2010
3ADB
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BU of 3adb by Molmil
Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and AMPPNP (crystal type 1)
Descriptor: L-seryl-tRNA(Sec) kinase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Itoh, Y, Chiba, S, Sekine, S, Yokoyama, S.
Deposit date:2010-01-18
Release date:2010-07-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for the Major Role of O-Phosphoseryl-tRNA Kinase in the UGA-Specific Encoding of Selenocysteine
Mol.Cell, 39, 2010
4OI4
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BU of 4oi4 by Molmil
Protein complex of Clp1 bound to ATP and Mg2+ with Pcf11deltaN454deltaC563 of S. cerevisiae
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Dikfidan, A, Loll, B, Zeymer, C, Clausen, T, Meinhart, A.
Deposit date:2014-01-18
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:RNA specificity and regulation of catalysis in the eukaryotic polynucleotide kinase clp1.
Mol.Cell, 54, 2014
8K43
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BU of 8k43 by Molmil
In situ structure of RNA-dependent RNA polymerase in full BAV particles
Descriptor: RNA-directed RNA polymerase (Fragment), VP2
Authors:Li, Z, Cao, S.
Deposit date:2023-07-17
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
2UUT
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BU of 2uut by Molmil
The 2.4 angstrom resolution structure of the D346G mutant of the Sapporo Virus RdRp polymerase
Descriptor: RNA-DIRECTED RNA POLYMERASE
Authors:Fullerton, S.W.B, Robel, I, Schuldt, L, Gebhardt, J, Tucker, P, Rohayem, J.
Deposit date:2007-03-07
Release date:2007-05-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The 2.4 Angstrom Resolution Structure of the D346G Mutant of the Sapporo Virus Rdrp Polymerase
To be Published

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PDB entries from 2024-08-28

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