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7UEK
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BU of 7uek by Molmil
Crystal structure of a de novo designed ovoid TIM barrel OT3
Descriptor: OT3
Authors:Chu, A.E, Fernandez, D, Huang, P.-S.
Deposit date:2022-03-21
Release date:2023-01-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:De Novo Design of a Highly Stable Ovoid TIM Barrel: Unlocking Pocket Shape towards Functional Design.
Biodes Res, 2022, 2022
1HCM
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BU of 1hcm by Molmil
Cytochrome cd1 Nitrite Reductase, oxidised from from tetragonal crystals
Descriptor: CYTOCHROME CD1 NITRITE REDUCTASE, HEME C, HEME D, ...
Authors:Sjogren, T, Hajdu, J.
Deposit date:2001-05-05
Release date:2001-08-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Structure of an Alternative Form of Paracoccus Pantotrophus Cytochrome Cd1 Nitrite Reductase
J.Biol.Chem., 276, 2001
8FQM
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BU of 8fqm by Molmil
ADC-7 in complex with boronic acid transition state inhibitor MB076
Descriptor: 1-[(2R)-2-{2-[(5-amino-1,3,4-thiadiazol-2-yl)sulfanyl]acetamido}-2-boronoethyl]-1H-1,2,3-triazole-4-carboxylic acid, Beta-lactamase, GLYCINE
Authors:Powers, R.A, Wallar, B.J, June, C.M, Fernando, M.C.
Deposit date:2023-01-06
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023
1GQ7
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BU of 1gq7 by Molmil
PROCLAVAMINATE AMIDINO HYDROLASE FROM STREPTOMYCES CLAVULIGERUS
Descriptor: MANGANESE (II) ION, PROCLAVAMINATE AMIDINO HYDROLASE
Authors:Elkins, J.M, Clifton, I.J, Hernandez, H, Robinson, C.V, Schofield, C.J, Hewitson, K.S.
Deposit date:2001-11-20
Release date:2002-06-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Oligomeric structure of proclavaminic acid amidino hydrolase: evolution of a hydrolytic enzyme in clavulanic acid biosynthesis.
Biochem. J., 366, 2002
8FQP
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BU of 8fqp by Molmil
apo ADC-162 beta-lactamase
Descriptor: Beta-lactamase, GLYCINE, PHOSPHATE ION
Authors:Powers, R.A, Wallar, B.J, June, C.M, Fernando, M.C.
Deposit date:2023-01-06
Release date:2023-07-05
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.419 Å)
Cite:Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023
8OG5
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BU of 8og5 by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 1
Descriptor: 1,2-ETHANEDIOL, 5-(2-fluorophenyl)-2,3-dihydroimidazo[2,1-a]isoquinoline, ACETATE ION, ...
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023
8OG8
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BU of 8og8 by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 3
Descriptor: 1,2-ETHANEDIOL, 5-(2-methyl-1-phenyl-propan-2-yl)imidazo[2,1-a]isoquinoline, ACETATE ION, ...
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023
8OG6
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BU of 8og6 by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 1
Descriptor: 5-(2-fluorophenyl)-2,3-dihydroimidazo[2,1-a]isoquinoline, ACETATE ION, DDB1- and CUL4-associated factor 1
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.245 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023
8OGC
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BU of 8ogc by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 11
Descriptor: 1,2-ETHANEDIOL, 1-[4-[4-(2-azanylethylamino)-2-[1-(4-chlorophenyl)cyclopentyl]quinazolin-7-yl]piperazin-1-yl]ethanone, ACETATE ION, ...
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023
8OG9
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BU of 8og9 by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 4
Descriptor: 5-[1-(4-chlorophenyl)cyclopropyl]imidazo[2,1-a]isoquinoline, DDB1- and CUL4-associated factor 1
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.945 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023
8OGB
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BU of 8ogb by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 8
Descriptor: 1,2-ETHANEDIOL, DDB1- and CUL4-associated factor 1, DIMETHYL SULFOXIDE, ...
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023
8OG7
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BU of 8og7 by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 2
Descriptor: (4~{R})-4-[3-(4-chloranylphenoxy)phenyl]pyrrolidin-2-imine, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023
8OGA
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BU of 8oga by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 6
Descriptor: 1,2-ETHANEDIOL, 5-[1-(4-methoxyphenyl)cyclopropyl]-8-(4-methylpiperazin-1-yl)-2,3-dihydroimidazo[2,1-a]isoquinoline, DDB1- and CUL4-associated factor 1, ...
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023
1H9X
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BU of 1h9x by Molmil
Cytochrome cd1 Nitrite Reductase, reduced form
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CYTOCHROME CD1 NITRITE REDUCTASE, HEME C, ...
Authors:Sjogren, T, Hajdu, J.
Deposit date:2001-03-23
Release date:2001-08-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure of an Alternative Form of Paracoccus Pantotrophus Cytochrome Cd1 Nitrite Reductase
J.Biol.Chem., 276, 2001
8I8J
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BU of 8i8j by Molmil
Crystal structure of the ternary complex of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter sp. with Coenzyme-A and Phosphonoacetic acid at 2.07 A resolution.
Descriptor: 1,2-ETHANEDIOL, COENZYME A, GLYCEROL, ...
Authors:Ahmad, N, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2023-02-04
Release date:2023-03-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of the ternary complex of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter sp. with Coenzyme-A and Phosphonoacetic acid at 2.07 A resolution.
To Be Published
8Q6P
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BU of 8q6p by Molmil
X. laevis CMG dimer bound to dimeric DONSON - MCM ATPase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA replication licensing factor mcm2, DNA replication licensing factor mcm4-B, ...
Authors:Butryn, A, Cvetkovic, M.A, Costa, A.
Deposit date:2023-08-14
Release date:2023-10-18
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:The structural mechanism of dimeric DONSON in replicative helicase activation.
Mol.Cell, 83, 2023
6QX5
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BU of 6qx5 by Molmil
Crystal structure of T7 bacteriophage portal protein, 12mer, closed valve
Descriptor: Portal protein
Authors:Fabrega-Ferrer, M, Cuervo, A, Machon, C, Fernandez, F.J, Perez-Luque, R, Pous, J, Vega, M.C, Carrascosa, J.L, Coll, M.
Deposit date:2019-03-07
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of T7 bacteriophage portal and tail suggest a viral DNA retention and ejection mechanism.
Nat Commun, 10, 2019
8Q6O
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BU of 8q6o by Molmil
X. laevis CMG dimer bound to dimeric DONSON - without ATPase
Descriptor: Cell division control protein 45 homolog, DNA replication complex GINS protein PSF1, DNA replication complex GINS protein PSF2, ...
Authors:Butryn, A, Cvetkovic, M.A, Costa, A.
Deposit date:2023-08-14
Release date:2023-10-18
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:The structural mechanism of dimeric DONSON in replicative helicase activation.
Mol.Cell, 83, 2023
8P1S
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BU of 8p1s by Molmil
Bifidobacterium asteroides alpha-L-fucosidase (TT1819) in complex with fucose.
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bifidobacterium asteroides alpha-L-fucosidase (TT1819), ...
Authors:Owen, C.D, Penner, M, Gascuena, A.N, Wu, H, Hernando, P.J, Monaco, S, Le Gall, G, Gardner, R, Ndeh, D, Urbanowicz, P.A, Spencer, D.I.R, Walsh, M.A, Angulo, J, Juge, N.
Deposit date:2023-05-12
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exploring sequence, structure and function of microbial fucosidases from glycoside hydrolase GH29 family
To Be Published
4HFG
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BU of 4hfg by Molmil
CID of human RPRD1B
Descriptor: Regulation of nuclear pre-mRNA domain-containing protein 1B, SULFATE ION, UNKNOWN ATOM OR ION
Authors:Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Guo, X, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
Deposit date:2012-10-05
Release date:2012-10-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:CID of human RPRD1B
TO BE PUBLISHED
2XNY
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BU of 2xny by Molmil
A fragment of streptococcal M1 protein in complex with human fibrinogen
Descriptor: FIBRINOGEN ALPHA CHAIN, FIBRINOGEN BETA CHAIN, FIBRINOGEN GAMMA CHAIN, ...
Authors:Macheboeuf, P, Y Fu, C, Zinkernagel, A.S, Johnson, J.E, Nizet, V, Ghosh, P.
Deposit date:2010-08-06
Release date:2011-04-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (7.5 Å)
Cite:Streptococcal M1 Protein Constructs a Pathological Host Fibrinogen Network
Nature, 472, 2011
8P1R
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BU of 8p1r by Molmil
Bifidobacterium asteroides alpha-L-fucosidase (TT1819) catalytic mutant.
Descriptor: 1,2-ETHANEDIOL, Bifidobacterium asteroides alpha-L-fucosidase (TT1819) catalytic mutant, MAGNESIUM ION
Authors:Owen, C.D, Penner, M, Gascuena, A.N, Wu, H, Hernando, P.J, Monaco, S, Le Gall, G, Gardner, R, Ndeh, D, Urbanowicz, P.A, Spencer, D.I.R, Walsh, M.A, Angulo, J, Juge, N.
Deposit date:2023-05-12
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.659 Å)
Cite:Exploring sequence, structure and function of microbial fucosidases from glycoside hydrolase GH29 family
To Be Published
1YFF
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BU of 1yff by Molmil
STRUCTURE OF HUMAN CARBONMONOXYHEMOGLOBIN C (BETA E6K): TWO QUATERNARY STATES (R2 and R3) IN ONE CRYSTAL
Descriptor: CARBON MONOXIDE, Hemoglobin alpha chain, Hemoglobin beta chain, ...
Authors:Patskovska, L, Patskovsky, Y, Hirsch, R.E, Almo, S.C.
Deposit date:2004-12-31
Release date:2005-01-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mechanism of Quaternary Transitions in Human Liganded Hemoglobin
To be Published
5OH1
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BU of 5oh1 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Aminoglutethimide
Descriptor: (3~{R})-3-(4-aminophenyl)-3-ethyl-piperidine-2,6-dione, Cereblon isoform 4, S-Thalidomide, ...
Authors:Boichenko, I, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B, Hartmann, M.D.
Deposit date:2017-07-14
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Chemical Ligand Space of Cereblon.
Acs Omega, 3, 2018
5OH9
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BU of 5oh9 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Thiazolidine-2,4-dione
Descriptor: 1,3-thiazole-2,4-dione, Cereblon isoform 4, ZINC ION
Authors:Boichenko, I, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B, Hartmann, M.D.
Deposit date:2017-07-14
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Chemical Ligand Space of Cereblon.
Acs Omega, 3, 2018

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PDB entries from 2024-07-17

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