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6TOI
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BU of 6toi by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 11f
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[[1-methyl-3-[(3~{R})-3-oxidanylbutyl]-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TOO
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BU of 6too by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 11a
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[[1-methyl-3-[(2~{S})-2-oxidanylbutyl]-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TOF
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BU of 6tof by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 4
Descriptor: 1,2-ETHANEDIOL, 2-[(1,3-dimethyl-2-oxidanylidene-benzimidazol-5-yl)amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Shetty, K, Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TOK
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BU of 6tok by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 23d
Descriptor: 1,2-ETHANEDIOL, 5-[[5-chloranyl-2-(3,5-dimethylpyrazol-1-yl)pyrimidin-4-yl]amino]-1-methyl-3-(3-methyl-3-oxidanyl-butyl)benzimidazol-2-one, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TON
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BU of 6ton by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 25b
Descriptor: 1,2-ETHANEDIOL, 5-[[5-chloranyl-2-(2,2,6,6-tetramethylmorpholin-4-yl)pyrimidin-4-yl]amino]-1-methyl-3-(3-methyl-3-oxidanyl-butyl)benzimidazol-2-one, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TBT
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BU of 6tbt by Molmil
Crystal structure of the BCL6 BTB domain in complex with an Apt48 peptide
Descriptor: Apt48 peptide, B-cell lymphoma 6 protein, CHLORIDE ION, ...
Authors:Zacharchenko, T, Wright, S.C.
Deposit date:2019-11-04
Release date:2021-10-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural basis of Apt48 inhibition of the BCL6 BTB domain.
Structure, 2021
6TCJ
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BU of 6tcj by Molmil
Crystal structure of the BCL6 BTB domain in complex with a hybrid BTB-binding (HBP) peptide
Descriptor: B-cell lymphoma 6 protein, Hybrid BTB-binding (HBP) peptide, SODIUM ION
Authors:Zacharchenko, T, Wright, S.C.
Deposit date:2019-11-06
Release date:2021-10-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural basis of Apt48 inhibition of the BCL6 BTB domain.
Structure, 2021
6TOL
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BU of 6tol by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 25a
Descriptor: 1,2-ETHANEDIOL, 5-[[5-chloranyl-2-[(2~{S},6~{R})-2,6-dimethylmorpholin-4-yl]pyrimidin-4-yl]amino]-1-methyl-3-(3-methyl-3-oxidanyl-butyl)benzimidazol-2-one, B-cell lymphoma 6 protein, ...
Authors:Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TOJ
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BU of 6toj by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 17a
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[[1-methyl-3-(3-methyl-3-oxidanyl-butyl)-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile, B-cell lymphoma 6 protein
Authors:Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
7RV0
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BU of 7rv0 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8446
Descriptor: B-cell lymphoma 6 protein, CHLORIDE ION, FORMIC ACID, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8446
To Be Published
7RUX
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BU of 7rux by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8311
Descriptor: B-cell lymphoma 6 protein, FORMIC ACID, N-(3-chloropyridin-4-yl)-2-(3-(cyclopropylmethyl)-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)acetamide
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8311
To Be Published
7RV2
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BU of 7rv2 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8828
Descriptor: B-cell lymphoma 6 protein, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8828
To Be Published
7RUW
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BU of 7ruw by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-7859
Descriptor: 2-(2-amino-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-N-(3-chloropyridin-4-yl)acetamide, B-cell lymphoma 6 protein, CHLORIDE ION, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-7859
To Be Published
7RUZ
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BU of 7ruz by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8445
Descriptor: 2-[2-(benzylamino)-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl]-N-(3-chloropyridin-4-yl)acetamide, B-cell lymphoma 6 protein, CHLORIDE ION, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8445
To Be Published
7RV1
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BU of 7rv1 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8826
Descriptor: (E)-3-(7-(2-((3-chloropyridin-4-yl)amino)-2-oxoethyl)-3-(3-(1-methyl-1H-pyrazol-4-yl)prop-2-yn-1-yl)-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)acrylamide, B-cell lymphoma 6 protein, DIMETHYL SULFOXIDE, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8826
To Be Published
7RUY
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BU of 7ruy by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8388
Descriptor: B-cell lymphoma 6 protein, FORMIC ACID, N-(3-chloropyridin-4-yl)-2-(2-{[(2,4-dimethoxyphenyl)methyl]amino}-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)acetamide
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8388
To Be Published
7T0U
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BU of 7t0u by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-12387
Descriptor: 3-chloro-5-{7-[2-({5-chloro-2-[(2S)-2-methyl-4-(oxetan-3-yl)piperazin-1-yl]pyridin-4-yl}amino)-2-oxoethyl]-3-methyl-4-oxo-2-(trifluoromethyl)-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl}-2-hydroxybenzamide, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-11-30
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-12387
To Be Published
7T0T
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BU of 7t0t by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-10562
Descriptor: DIMETHYL SULFOXIDE, Isoform 2 of B-cell lymphoma 6 protein, N-[5-chloro-2-(morpholin-4-yl)pyridin-4-yl]-2-[5-(3-cyano-4-hydroxy-5-methylphenyl)-3-methyl-2-(1-methyl-1H-pyrazol-4-yl)-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl]acetamide
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-11-30
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-10562
To Be Published
7T58
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BU of 7t58 by Molmil
Crystal structure of Miz1 BTB domain
Descriptor: DIMETHYL SULFOXIDE, Zinc finger and BTB domain-containing protein 17
Authors:Linhares, B.M, Cierpicki, T.
Deposit date:2021-12-11
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05333114 Å)
Cite:Prediction of BTB domain ligandability guided by protein dynamics
To Be Published
7T0S
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BU of 7t0s by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-11864
Descriptor: 3-chloro-5-{1-[2-({5-chloro-2-[(3S)-3-methylmorpholin-4-yl]pyridin-4-yl}amino)-2-oxoethyl]-4-fluoro-1H-pyrrolo[2,3-b]pyridin-3-yl}-2-hydroxybenzamide, CHLORIDE ION, GLYCEROL, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-11-30
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-11864
To Be Published
7ZWR
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BU of 7zwr by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 11
Descriptor: 1,2-ETHANEDIOL, 2-[2-[[(6~{S})-3-cyano-6-methyl-4-(trifluoromethyl)-5,6,7,8-tetrahydroquinolin-2-yl]sulfanyl]ethanoylamino]ethanoic acid, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
7ZWX
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BU of 7zwx by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 19
Descriptor: 1,2-ETHANEDIOL, 6-[1,3-benzodioxol-5-ylmethyl(methyl)amino]-1-~{tert}-butyl-5~{H}-pyrazolo[3,4-d]pyrimidin-4-one, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
7ZWU
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BU of 7zwu by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 15
Descriptor: 1,2-ETHANEDIOL, ALA-TRP-VAL-ILE-PRO-ALA, B-cell lymphoma 6 protein, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
7ZWQ
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BU of 7zwq by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 10
Descriptor: 1,2-ETHANEDIOL, B-cell lymphoma 6 protein, DIMETHYL SULFOXIDE, ...
Authors:Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
7ZWY
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BU of 7zwy by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 21
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[(phenylmethyl)amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Shetty, K, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022

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PDB entries from 2024-09-18

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