PDB: 72960 resultsInfo pagesStatus searchChemie searchBIRD

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7CYL	Crystal structure of Karyopherin-beta2 in complex with FUS PY-NLS(P525L) Descriptor: RNA-binding protein FUS, Transportin-1 Authors: Yoshizawa, T, Chook, Y.M. Deposit date: 2020-09-03 Release date: 2021-02-24 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Mechanism of karyopherin-beta 2 binding and nuclear import of ALS variants FUS(P525L) and FUS(R495X). Sci Rep, 11, 2021
5K71	apo Dbr1 Descriptor: RNA lariat debranching enzyme, putative, SULFATE ION Authors: Clark, N.E, Taylor, A.B, Hart, P.J. Deposit date: 2016-05-25 Release date: 2016-12-07 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.57 Å) Cite: The RNA lariat debranching enzyme Dbr1: metal dependence and branched RNA co-crystal structures Proc.Natl.Acad.Sci.USA, 2016
3P9Y	Crystal structure of the Drosophila melanogaster Ssu72-pCTD complex Descriptor: CG14216, IMIDAZOLE, TETRAETHYLENE GLYCOL, ... Authors: Werner-Allen, J.W, Zhou, P. Deposit date: 2010-10-18 Release date: 2010-12-15 Last modified: 2016-08-17 Method: X-RAY DIFFRACTION (2.1 Å) Cite: cis-Proline-mediated Ser(P)5 Dephosphorylation by the RNA Polymerase II C-terminal Domain Phosphatase Ssu72. J.Biol.Chem., 286, 2011
3JB2	Atomic model of cytoplasmic polyhedrosis virus with SAM and GTP Descriptor: Capsid protein VP1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. Deposit date: 2015-07-06 Release date: 2015-08-12 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
3JB1	Atomic model of cytoplasmic polyhedrosis virus with SAM Descriptor: Capsid protein VP1, S-ADENOSYLMETHIONINE, Structural protein VP3, ... Authors: Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. Deposit date: 2015-07-06 Release date: 2015-08-12 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
3JB3	Atomic model of cytoplasmic polyhedrosis virus with SAM, GTP and ATP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Capsid protein VP1, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. Deposit date: 2015-07-06 Release date: 2015-08-12 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
3JAY	Atomic model of transcribing cytoplasmic polyhedrosis virus Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Capsid protein VP1, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. Deposit date: 2015-07-06 Release date: 2015-08-12 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3 Å) Cite: A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
3JAZ	Atomic model of cytoplasmic polyhedrosis virus with ATP Descriptor: Capsid protein VP1, Structural protein VP3, Viral structural protein 5 Authors: Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. Deposit date: 2015-07-06 Release date: 2015-08-12 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
3JB0	Atomic model of cytoplasmic polyhedrosis virus with GTP Descriptor: Capsid protein VP1, GUANOSINE-5'-TRIPHOSPHATE, Structural protein VP3, ... Authors: Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H. Deposit date: 2015-07-06 Release date: 2015-08-12 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife, 4, 2015
7WIA	The apo-form of THF-II C22G riboswitch Descriptor: RNA (50-MER) Authors: Xu, L, Fang, X, Xiao, Y. Deposit date: 2022-01-03 Release date: 2023-01-18 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (3.22 Å) Cite: Structural insights into translation regulation by the THF-II riboswitch. Nucleic Acids Res., 51, 2023
7EF1	crystal structure of maize SHH2 SAWADEE domain in complex with and H3K9me1 peptide Descriptor: HB transcription factor, Histone H3.2, ZINC ION Authors: Wang, Y, Du, J. Deposit date: 2021-03-20 Release date: 2021-06-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2. J Integr Plant Biol, 63, 2021
7EF2	Crystal structure of maize SHH2 SAWADEE domain in complex with an H3K9me3 peptide Descriptor: HB transcription factor, Histone H3.2, ZINC ION Authors: Wang, Y, Du, J. Deposit date: 2021-03-20 Release date: 2021-06-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2 Å) Cite: Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2. J Integr Plant Biol, 63, 2021
7EF3	crystal structure of maize SHH2 SAWADEE domain in complex with H3K9me2 peptide Descriptor: HB transcription factor, Histone H3.2, ZINC ION Authors: Wang, Y, Du, J. Deposit date: 2021-03-20 Release date: 2021-06-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2. J Integr Plant Biol, 63, 2021
3PW0	Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-FAPY) with DNA Polymerase IV and incoming dATP Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), ... Authors: Banerjee, S. Deposit date: 2010-12-07 Release date: 2011-08-10 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.91 Å) Cite: Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV. J.Am.Chem.Soc., 133, 2011
3PW7	Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dCTP Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1, CALCIUM ION, ... Authors: Banerjee, S. Deposit date: 2010-12-07 Release date: 2011-08-10 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV. J.Am.Chem.Soc., 133, 2011
2IJD	Crystal Structure of the Poliovirus Precursor Protein 3CD Descriptor: Picornain 3C, RNA-directed RNA polymerase, SULFATE ION, ... Authors: Marcotte, L.L, Gohara, D.W, Filman, D.J, Hogle, J.M. Deposit date: 2006-09-29 Release date: 2007-02-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Crystal structure of poliovirus 3CD: virally-encoded protease and precursor to the RNA-dependent RNA polymerase. J.Virol., 81, 2007
6LAX	the mutant SAM-VI riboswitch (U6C) bound to SAM Descriptor: RNA (55-MER), S-ADENOSYLMETHIONINE, U1 small nuclear ribonucleoprotein A Authors: Sun, A, Ren, A. Deposit date: 2019-11-13 Release date: 2020-01-01 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.7 Å) Cite: SAM-VI riboswitch structure and signature for ligand discrimination. Nat Commun, 10, 2019
4E89	Crystal Structure of RnaseH from gammaretrovirus Descriptor: CADMIUM ION, MAGNESIUM ION, RNase H Authors: Kim, J.H, Kim, S.J. Deposit date: 2012-03-19 Release date: 2012-10-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of xenotropic murine leukaemia virus-related virus (XMRV) ribonuclease H Biosci.Rep., 32, 2012
4KHW	Ternary complex of RB69 mutant L415F with ribonucleotide at -2 position Descriptor: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3'), DNA polymerase, ... Authors: Clausen, A.R, Pedersen, L.C. Deposit date: 2013-05-01 Release date: 2013-10-09 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.371 Å) Cite: Structure-function analysis of ribonucleotide bypass by B family DNA replicases. Proc.Natl.Acad.Sci.USA, 110, 2013
4KI6	Ternary complex of rb69 mutant l415f with ribonucleotides at -1 and -2 position Descriptor: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3'), DNA polymerase, ... Authors: Clausen, A.R, Pedersen, L.C. Deposit date: 2013-05-01 Release date: 2013-10-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Structure-function analysis of ribonucleotide bypass by B family DNA replicases. Proc.Natl.Acad.Sci.USA, 110, 2013
8PO8	Structure of Escherichia coli HrpA in complex with ADP and oligonucleotide poly(dC)11 forming an i-motif Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase HrpA, DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3'), ... Authors: Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G. Deposit date: 2023-07-03 Release date: 2024-05-08 Method: X-RAY DIFFRACTION (2.52 Å) Cite: Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition. Nucleic Acids Res., 52, 2024
8PO6	Structure of Escherichia coli HrpA apo form Descriptor: ATP-dependent RNA helicase HrpA, PHOSPHATE ION Authors: Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G. Deposit date: 2023-07-03 Release date: 2024-05-08 Method: X-RAY DIFFRACTION (2.66 Å) Cite: Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition. Nucleic Acids Res., 52, 2024
8PO7	Structure of Escherichia coli HrpA in complex with ADP and dinucleotide dCdC Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase HrpA, DNA (5'-D(P*CP*C)-3'), ... Authors: Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G. Deposit date: 2023-07-03 Release date: 2024-05-08 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.26 Å) Cite: Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition. Nucleic Acids Res., 52, 2024
4KI4	Ternary complex of rb69 mutant L415F with ribonucleotides at 0 and -1 position Descriptor: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3'), DNA polymerase, ... Authors: Clausen, A.R, Pedersen, L.C. Deposit date: 2013-05-01 Release date: 2013-10-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Structure-function analysis of ribonucleotide bypass by B family DNA replicases. Proc.Natl.Acad.Sci.USA, 110, 2013
4KHY	Ternary complex of rb69 mutant L415F with ribonucleotide at -3 position Descriptor: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3'), DNA polymerase, ... Authors: Clausen, A.R, Pedersen, L.C. Deposit date: 2013-05-01 Release date: 2013-10-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Structure-function analysis of ribonucleotide bypass by B family DNA replicases. Proc.Natl.Acad.Sci.USA, 110, 2013

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