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7UI4
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BU of 7ui4 by Molmil
Crystal structure of the DNA preQ0 insertase DpdA
Descriptor: DNA-guanine transglycosylase, ZINC ION
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-03-28
Release date:2023-02-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:7-Deazaguanines in DNA: functional and structural elucidation of a DNA modification system.
Nucleic Acids Res., 51, 2023
6L9L
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BU of 6l9l by Molmil
1D4 TCR recognition of H2-Ld a1a2 A5 Peptide Complexes
Descriptor: H2-Ld a1a2, SER-PRO-SER-TYR-ALA-TYR-HIS-GLN-PHE, T Cell Receptor
Authors:Wei, P.C, Yin, L.
Deposit date:2019-11-10
Release date:2020-11-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structures suggest an approach for converting weak self-peptide tumor antigens into superagonists for CD8 T cells in cancer.
Proc.Natl.Acad.Sci.USA, 118, 2021
8B5M
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BU of 8b5m by Molmil
Crystal structure of GH47 alpha-1,2-mannosidase from Caulobacter K31 strain in complex with cyclosulfamidate inhibitor
Descriptor: (3aR,4S,5S,6R,7R,7aS)-7-(hydroxymethyl)-2,2-bis(oxidanylidene)-3a,4,5,6,7,7a-hexahydro-3H-benzo[d][1,2,3]oxathiazole-4,5,6-triol, CALCIUM ION, Mannosyl-oligosaccharide 1,2-alpha-mannosidase, ...
Authors:Males, A, Davies, G.J.
Deposit date:2022-09-23
Release date:2023-10-04
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:GH47 and Cyclosulfamidate
To Be Published
8OW4
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BU of 8ow4 by Molmil
2.75 angstrom crystal structure of human NFAT1 with bound DNA
Descriptor: DNA (5'-D(*AP*AP*CP*TP*AP*TP*TP*TP*TP*TP*CP*CP*AP*GP*C)-3'), DNA (5'-D(*TP*TP*GP*CP*TP*GP*GP*AP*AP*AP*AP*AP*TP*AP*G)-3'), Nuclear factor of activated T-cells, ...
Authors:Lopez-Sagaseta, J, Erausquin, E, Hernandez-Morales, S, Urdiciain, A, Lasarte, J.J, Lozano, T.
Deposit date:2023-04-27
Release date:2023-07-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:2.75 angstrom crystal structure of human NFAT1 with bound DNA
Not published
8B5Q
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BU of 8b5q by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UMP
Descriptor: UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-MONOPHOSPHATE
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-24
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
6KXK
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BU of 6kxk by Molmil
BON1
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Wang, Q.C, Jiang, M.Q, Isupov, M.N, Sun, L.F, Wu, Y.K.
Deposit date:2019-09-12
Release date:2020-09-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of an Arabidopsis Copine providing insights into this protein family
To be published
6U1M
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BU of 6u1m by Molmil
Resting state of rat cysteine dioxygenase R60E variant
Descriptor: Cysteine dioxygenase type 1, FE (III) ION
Authors:Pinkney, H.R, Fellner, M, Wilbanks, S.M.
Deposit date:2019-08-16
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Resting state of rat cysteine dioxygenase R60E variant
To be Published
8B5S
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BU of 8b5s by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-glucose
Descriptor: UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-DIPHOSPHATE, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-24
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
5ZSH
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BU of 5zsh by Molmil
Crystal structure of monkey TLR7 in complex with CL075
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-propyl[1,3]thiazolo[4,5-c]quinolin-4-amine, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2018-04-28
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Analyses of Toll-like Receptor 7 Reveal Detailed RNA Sequence Specificity and Recognition Mechanism of Agonistic Ligands.
Cell Rep, 25, 2018
6O9Q
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BU of 6o9q by Molmil
Wild-type SaSQS1
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Sesquisabinene B synthase 1
Authors:Blank, P.N, Christianson, D.W.
Deposit date:2019-03-14
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Sesquisabinene Synthase 1, a Terpenoid Cyclase That Generates a Strained [3.1.0] Bridged-Bicyclic Product.
Acs Chem.Biol., 14, 2019
8B87
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BU of 8b87 by Molmil
Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Descriptor: AMMONIUM ION, DI(HYDROXYETHYL)ETHER, Protein E6, ...
Authors:Stewart, B.Z, Kvansakul, M.
Deposit date:2022-10-04
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
To Be Published
7NPC
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BU of 7npc by Molmil
ROR(gamma)t ligand binding domain in complex with allosteric ligand FM156
Descriptor: 4-[[3-[2-chloranyl-6-(trifluoromethyl)phenyl]-5-(1~{H}-pyrrol-3-yl)-1,2-oxazol-4-yl]methoxy]benzoic acid, GLYCEROL, Nuclear receptor ROR-gamma
Authors:de Vries, R.M.J.M, Meijer, F.A, Brunsveld, L.
Deposit date:2021-02-26
Release date:2021-06-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure-Activity Relationship Studies of Trisubstituted Isoxazoles as Selective Allosteric Ligands for the Retinoic-Acid-Receptor-Related Orphan Receptor gamma t.
J.Med.Chem., 64, 2021
5ZSX
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BU of 5zsx by Molmil
Catechol 2,3-dioxygenase with 3-fluorocatechol from Diaphorobacter sp DS2
Descriptor: 1,2-ETHANEDIOL, 3-FLUOROBENZENE-1,2-DIOL, CALCIUM ION, ...
Authors:Mishra, K, Arya, C.K, Subramanian, R, Ramanathan, G.
Deposit date:2018-04-30
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Catechol 2,3-dioxygenase with 3-fluorocatechol from Diaphorobacter sp DS2.
To Be Published
6KYP
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BU of 6kyp by Molmil
X-ray structure of human PPARalpha ligand binding domain-GW9662-clofibric acid co-crystals obtained by delipidation and co-crystallization
Descriptor: 2-(4-chloranylphenoxy)-2-methyl-propanoic acid, 2-chloro-5-nitro-N-phenylbenzamide, Peroxisome proliferator-activated receptor alpha
Authors:Kamata, S, Saito, K, Honda, A, Ishikawa, R, Oyama, T, Ishii, I.
Deposit date:2019-09-19
Release date:2020-11-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates.
Iscience, 23, 2020
7NP5
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BU of 7np5 by Molmil
ROR(gamma)t ligand binding domain in complex with allosteric ligand FM216
Descriptor: 4-[[3-[2-chloranyl-6-(trifluoromethyl)phenyl]-5-(1~{H}-pyrrol-3-yl)-1,2-oxazol-4-yl]methoxy]-2-fluoranyl-benzoic acid, Nuclear receptor ROR-gamma
Authors:Oerlemans, G.J.M, Somsen, B.A, de Vries, R.M.J.M, Meijer, F.A, Brunsveld, L.
Deposit date:2021-02-26
Release date:2021-06-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-Activity Relationship Studies of Trisubstituted Isoxazoles as Selective Allosteric Ligands for the Retinoic-Acid-Receptor-Related Orphan Receptor gamma t.
J.Med.Chem., 64, 2021
6U4A
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BU of 6u4a by Molmil
BRD3-BD1 in complex with the cyclic peptide 3.1_3
Descriptor: Bromodomain-containing protein 3, GLYCEROL, SULFATE ION, ...
Authors:Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
Deposit date:2019-08-24
Release date:2020-08-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
7UVH
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BU of 7uvh by Molmil
Pfs230 domain 1 bound by RUPA-32 Fab
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AMMONIUM ION, ...
Authors:Ivanochko, D, Newton, J, Julien, J.P.
Deposit date:2022-05-02
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Potent transmission-blocking monoclonal antibodies from naturally exposed individuals target a conserved epitope on Plasmodium falciparum Pfs230.
Immunity, 56, 2023
8B62
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BU of 8b62 by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-galactose
Descriptor: GALACTOSE-URIDINE-5'-DIPHOSPHATE, GLYCEROL, UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-25
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8B9S
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BU of 8b9s by Molmil
NATIVE FORM, THERMOSTABLE LIPASE FROM THERMOANAEROBACTER THERMOHYDROSULFURICUS
Descriptor: DECANE, GLYCEROL, PHOSPHATE ION, ...
Authors:Pinotsis, N, Wilmanns, M.
Deposit date:2022-10-06
Release date:2023-10-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Discovery of a non-canonical prototype long-chain monoacylglycerol lipase through a structure-based endogenous reaction intermediate complex.
Nat Commun, 14, 2023
6U4J
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BU of 6u4j by Molmil
Crystal structure of IDH1 R132H mutant in complex with FT-2102
Descriptor: 5-{[(1S)-1-(6-chloro-2-oxo-1,2-dihydroquinolin-3-yl)ethyl]amino}-1-methyl-6-oxo-1,6-dihydropyridine-2-carbonitrile, CHLORIDE ION, CITRATE ANION, ...
Authors:Toms, A.V, Lin, J.
Deposit date:2019-08-25
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structure-Based Design and Identification of FT-2102 (Olutasidenib), a Potent Mutant-Selective IDH1 Inhibitor.
J.Med.Chem., 63, 2020
8B9T
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BU of 8b9t by Molmil
Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ISOPROPYL ALCOHOL, Protein E6, ...
Authors:Stewart, B.Z, Kvansakul, M.
Deposit date:2022-10-07
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
To Be Published
8P91
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BU of 8p91 by Molmil
Hfq from Chromobacterium haemolyticum; a P6 space group monomer
Descriptor: RNA-binding protein Hfq
Authors:Nikulin, A.D, Lekontseva, N.V.
Deposit date:2023-06-05
Release date:2023-07-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Hfq from Chromobacterium haemolyticum
Crystallography Reports
8B63
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BU of 8b63 by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-GalNAc
Descriptor: ACETATE ION, UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-DIPHOSPHATE, ...
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-25
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
7NEC
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BU of 7nec by Molmil
ROR(gamma)t ligand binding domain in complex with allosteric ligand FM217
Descriptor: 4-[[3-[2-chloranyl-6-(trifluoromethyl)phenyl]-5-(1~{H}-pyrrol-2-yl)-1,2-oxazol-4-yl]methoxy]benzoic acid, Nuclear receptor ROR-gamma
Authors:Somsen, B.A, de Vries, R.M.J.M, Meijer, F.A, Brunsveld, L.
Deposit date:2021-02-03
Release date:2021-06-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-Activity Relationship Studies of Trisubstituted Isoxazoles as Selective Allosteric Ligands for the Retinoic-Acid-Receptor-Related Orphan Receptor gamma t.
J.Med.Chem., 64, 2021
8BV9
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BU of 8bv9 by Molmil
Acylphosphatase from E. coli
Descriptor: 1,2-ETHANEDIOL, Acylphosphatase, GLYCEROL, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2023-01-18
Release date:2023-10-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:First 3-D structural evidence of a native-like intertwined dimer in the acylphosphatase family.
Biochem.Biophys.Res.Commun., 682, 2023

224004

PDB entries from 2024-08-21

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