PDB: 163 resultsInfo pagesStatus searchChemie searchBIRD

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1MXR	High resolution structure of Ribonucleotide reductase R2 from E. coli in its oxidised (Met) form Descriptor: FE (III) ION, GLYCEROL, MERCURY (II) ION, ... Authors: Andersson, M.A, Hogbom, M, Nordlund, P. Deposit date: 2002-10-03 Release date: 2003-03-25 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.42 Å) Cite: Displacement of the tyrosyl radical cofactor in ribonucleotide reductase obtained by single-crystal high-field EPR and 1.4-A x-ray data. Proc.Natl.Acad.Sci.Usa, 100, 2003
5DCR	R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (short soak) Descriptor: FE (III) ION, MANGANESE (III) ION, PALMITIC ACID, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2015-08-24 Release date: 2015-09-09 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.108 Å) Cite: Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor. J.Biol.Chem., 290, 2015
5DCS	R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (long soak) Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2015-08-24 Release date: 2015-09-09 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.006 Å) Cite: Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor. J.Biol.Chem., 290, 2015
7MMV	Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae with Cu(I) bound (Cu sulfate soak) Descriptor: CHLORIDE ION, COPPER (I) ION, GLYCEROL, ... Authors: Palowitch, G.M, Boal, A.K. Deposit date: 2021-04-30 Release date: 2022-05-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Ribonucleotide Reductas To be published
7MMT	Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae with Cu(I) bound (Cu chloride soak) Descriptor: CHLORIDE ION, COPPER (I) ION, GLYCEROL, ... Authors: Palowitch, G.M, Boal, A.K. Deposit date: 2021-04-30 Release date: 2022-05-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Ribonucleotide Reductase To be published
7MMW	Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae (in alternate conformation) Descriptor: CALCIUM ION, Ribonucleoside-diphosphate reductase Authors: Palowitch, G.M, Boal, A.K. Deposit date: 2021-04-30 Release date: 2022-05-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Ribonucleotide Reductase To be published
7MMU	Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae with Cu(I) bound (Cu acetonitrile soak) Descriptor: CHLORIDE ION, COPPER (I) ION, Ribonucleoside-diphosphate reductase Authors: Palowitch, G.M, Boal, A.K. Deposit date: 2021-04-30 Release date: 2022-05-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.08 Å) Cite: Ribonucleotide Reductase To be published
6QK2	R2-like ligand-binding oxidase Y715F mutant with anaerobically reconstituted Mn/Fe cofactor Descriptor: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2019-01-28 Release date: 2020-02-19 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.596 Å) Cite: Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein. J.Am.Chem.Soc., 142, 2020
6QK0	R2-like ligand-binding oxidase E69D mutant with anaerobically reconstituted Mn/Fe cofactor Descriptor: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2019-01-28 Release date: 2020-02-19 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.091 Å) Cite: Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein. J.Am.Chem.Soc., 142, 2020
6QJV	R2-like ligand-binding oxidase E69D mutant with aerobically reconstituted Mn/Fe cofactor Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2019-01-25 Release date: 2020-02-12 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.905 Å) Cite: Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein. J.Am.Chem.Soc., 142, 2020
6QK1	R2-like ligand-binding oxidase Y175F mutant with aerobically reconstituted Mn/Fe cofactor Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2019-01-28 Release date: 2020-02-19 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.754 Å) Cite: Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein. J.Am.Chem.Soc., 142, 2020
6QRZ	Crystal structure of R2-like ligand-binding oxidase from Sulfolobus acidocaldarius solved by 3D micro-crystal electron diffraction Descriptor: FE (III) ION, MANGANESE (III) ION, Ribonucleoside-diphosphate reductase Authors: Xu, H, Lebrette, H, Clabbers, M.T.B, Zhao, J, Griese, J.J, Zou, X, Hogbom, M. Deposit date: 2019-02-20 Release date: 2019-04-24 Last modified: 2024-05-15 Method: ELECTRON CRYSTALLOGRAPHY (3 Å) Cite: Solving a new R2lox protein structure by microcrystal electron diffraction. Sci Adv, 5, 2019
6QO8	Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis anaerobically soaked with ferrous ions Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, ... Authors: Grave, K, Hogbom, M. Deposit date: 2019-02-12 Release date: 2019-08-21 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.31921768 Å) Cite: Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access. J.Biol.Inorg.Chem., 24, 2019
6QO9	Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis soaked with manganese ions Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, ... Authors: Grave, K, Hogbom, M. Deposit date: 2019-02-12 Release date: 2019-08-21 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.299 Å) Cite: Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access. J.Biol.Inorg.Chem., 24, 2019
6QO7	Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis aerobically soaked with ferrous ions (photo-reduced) Descriptor: CHLORIDE ION, FE (II) ION, Ribonucleoside-diphosphate reductase subunit beta Authors: Grave, K, Hogbom, M. Deposit date: 2019-02-12 Release date: 2019-08-21 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.628 Å) Cite: Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access. J.Biol.Inorg.Chem., 24, 2019
6QO5	Crystal structure of apo (metal-free) ribonucleotide reductase NrdF from Bacillus anthracis Descriptor: CHLORIDE ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION Authors: Grave, K, Hogbom, M. Deposit date: 2019-02-12 Release date: 2019-08-21 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.511 Å) Cite: Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access. J.Biol.Inorg.Chem., 24, 2019
6QOB	Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis with partially oxidised di-iron metallocofactor Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, Ribonucleoside-diphosphate reductase subunit beta, ... Authors: Grave, K, Hogbom, M. Deposit date: 2019-02-12 Release date: 2019-08-21 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.457 Å) Cite: Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access. J.Biol.Inorg.Chem., 24, 2019
6F6B	R2-like ligand-binding oxidase A171F mutant with anaerobically reconstituted Mn/Fe cofactor Descriptor: FE (II) ION, MANGANESE (II) ION, Ribonucleotide reductase small subunit Authors: Griese, J.J, Hogbom, M. Deposit date: 2017-12-05 Release date: 2018-12-19 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.009 Å) Cite: Assembly of a heterodinuclear Mn/Fe cofactor is coupled to tyrosine-valine ether cross-link formation in the R2-like ligand-binding oxidase. J. Biol. Inorg. Chem., 24, 2019
6F6F	R2-like ligand-binding oxidase V72I mutant with aerobically reconstituted Mn/Fe cofactor Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2017-12-05 Release date: 2018-07-04 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.788 Å) Cite: Ether cross-link formation in the R2-like ligand-binding oxidase. J. Biol. Inorg. Chem., 23, 2018
6F6E	R2-like ligand-binding oxidase V72A mutant with anaerobically reconstituted Mn/Fe cofactor Descriptor: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2017-12-05 Release date: 2018-07-04 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.627 Å) Cite: Ether cross-link formation in the R2-like ligand-binding oxidase. J. Biol. Inorg. Chem., 23, 2018
6F65	R2-like ligand-binding oxidase A171F mutant with aerobically reconstituted Mn/Fe cofactor Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2017-12-05 Release date: 2018-12-19 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.948 Å) Cite: Assembly of a heterodinuclear Mn/Fe cofactor is coupled to tyrosine-valine ether cross-link formation in the R2-like ligand-binding oxidase. J. Biol. Inorg. Chem., 24, 2019
6GP2	Ribonucleotide Reductase class Ie R2 from Mesoplasma florum, DOPA-active form Descriptor: CALCIUM ION, Ribonucleoside-diphosphate reductase beta chain Authors: Srinivas, V, Lebrette, H, Lundin, D, Kutin, Y, Sahlin, M, Lerche, M, Enrich, J, Branca, R.M.M, Cox, N, Sjoberg, B.M, Hogbom, M. Deposit date: 2018-06-05 Release date: 2018-08-22 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.48 Å) Cite: Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens. Nature, 563, 2018
6GP3	Ribonucleotide Reductase class Ie R2 from Mesoplasma florum, inactive form Descriptor: CALCIUM ION, Ribonucleoside-diphosphate reductase beta chain Authors: Srinivas, V, Lebrette, H, Lundin, D, Kutin, Y, Sahlin, M, Lerche, M, Enrich, J, Branca, R.M.M, Cox, N, Sjoberg, B.M, Hogbom, M. Deposit date: 2018-06-05 Release date: 2018-08-22 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.23 Å) Cite: Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens. Nature, 563, 2018
6I90	R2-like ligand-binding oxidase G68F mutant with aerobically reconstituted Mn/Fe cofactor Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2018-11-22 Release date: 2019-10-16 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.803 Å) Cite: Chemical flexibility of heterobimetallic Mn/Fe cofactors: R2lox and R2c proteins. J.Biol.Chem., 294, 2019
6I93	R2-like ligand-binding oxidase G68L mutant with aerobically reconstituted Fe/Fe cofactor Descriptor: FE (III) ION, OCTANOIC ACID (CAPRYLIC ACID), Ribonucleotide reductase small subunit Authors: Griese, J.J, Hogbom, M. Deposit date: 2018-11-22 Release date: 2019-10-16 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.101 Å) Cite: Chemical flexibility of heterobimetallic Mn/Fe cofactors: R2lox and R2c proteins. J.Biol.Chem., 294, 2019

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