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6FF5
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X-ray structure of bovine heart cytochrome c at high ionic strength
分子名称: Cytochrome c, HEME C, NITRATE ION, ...
著者Merlino, A.
登録日2018-01-03
公開日2018-03-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献X-ray structure of bovine heart cytochrome c at high ionic strength.
Biometals, 31, 2018
6F1Q
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BU of 6f1q by Molmil
Crystal structure of three-domain heme-Cu nitrite reductase from Ralstonia pickettii in I213 space group
分子名称: COPPER (II) ION, HEME C, Nitrite reductase
著者Antonyuk, S, Sasaki, D, Eady, R.R, Hasnain, S.S.
登録日2017-11-22
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Substrate entry and binding requires activation of tyrosine in heme-copper nitrite reductase
To be published
6EGZ
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BU of 6egz by Molmil
Crystal structure of cytochrome c in complex with di-PEGylated sulfonatocalix[4]arene
分子名称: Cytochrome c iso-1, HEME C, SODIUM ION, ...
著者Mummidivarapu, V.V.S, Rennie, M.L, Crowley, P.B.
登録日2017-09-12
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Noncovalent PEGylation via Sulfonatocalix[4]arene-A Crystallographic Proof.
Bioconjug.Chem., 29, 2018
6EGY
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BU of 6egy by Molmil
Crystal structure of cytochrome c in complex with mono-PEGylated sulfonatocalix[4]arene
分子名称: Cytochrome c iso-1, HEME C, SULFATE ION, ...
著者Mummidivarapu, V.V.S, Rennie, M.L, Crowley, P.B.
登録日2017-09-12
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Noncovalent PEGylation via Sulfonatocalix[4]arene-A Crystallographic Proof.
Bioconjug.Chem., 29, 2018
6ECJ
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BU of 6ecj by Molmil
Human cytochrome c G41T
分子名称: Cytochrome c, HEME C
著者Fellner, M, Jameson, G.N.L, Ledgerwood, E.C, Wilbanks, S.M.
登録日2018-08-08
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Altered structure and dynamics of pathogenic cytochrome c variants correlate with increased apoptotic activity.
Biochem.J., 2021
6DUJ
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BU of 6duj by Molmil
Crystal structure of A51V variant of Human Cytochrome c
分子名称: Cytochrome c, HEME C
著者Lei, H, Bowler, B.E.
登録日2018-06-20
公開日2019-06-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.82202721 Å)
主引用文献Naturally Occurring A51V Variant of Human CytochromecDestabilizes the Native State and Enhances Peroxidase Activity.
J.Phys.Chem.B, 123, 2019
6CUN
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BU of 6cun by Molmil
Engineered Cytochrome c from Rhodothermus marinus (Rma TDE) bound to carbene intermediate (1-ethoxy-1-oxopropan-2-ylidene)
分子名称: Cytochrome c, ETHYL PROPIONATE, HEME C
著者Lewis, R.D, Buller, A.R, Arnold, F.H.
登録日2018-03-26
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Catalytic iron-carbene intermediate revealed in a cytochromeccarbene transferase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CUK
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BU of 6cuk by Molmil
Engineered Cytochrome c from Rhodothermus marinus, Rma TDE
分子名称: Cytochrome c, HEME C
著者Lewis, R.D, Buller, A.R, Arnold, F.H.
登録日2018-03-26
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Catalytic iron-carbene intermediate revealed in a cytochromeccarbene transferase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6C4W
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BU of 6c4w by Molmil
Structure of the yeast Pichia membranifaciens cytochrome c
分子名称: HEME C, cytochrome c
著者McPherson, A.
登録日2018-01-13
公開日2018-02-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Characterization of two crystal forms of cytochrome c from Valida membranifaciens
to be published
6BTM
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BU of 6btm by Molmil
Structure of Alternative Complex III from Flavobacterium johnsoniae (Wild Type)
分子名称: (2S)-3-hydroxypropane-1,2-diyl ditetradecanoate, Alternative Complex III subunit A, Alternative Complex III subunit B, ...
著者Sun, C, Benlekbir, S, Venkatakrishnan, P, Yuhang, W, Tajkhorshid, E, Rubinstein, J.L, Gennis, R.B.
登録日2017-12-07
公開日2018-05-09
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the alternative complex III in a supercomplex with cytochrome oxidase.
Nature, 557, 2018
6ADQ
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BU of 6adq by Molmil
Respiratory Complex CIII2CIV2SOD2 from Mycobacterium smegmatis
分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
著者Gong, H.R, Xu, A, Gao, R.G, Ji, W.X, Wang, S.H, Wang, Q, Li, J, Rao, Z.H.
登録日2018-08-01
公開日2018-11-14
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献An electron transfer path connects subunits of a mycobacterial respiratory supercomplex.
Science, 362, 2018
5ZKV
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BU of 5zkv by Molmil
Solution structure of molten globule state of L94G mutant of horse cytochrome-c
分子名称: Cytochrome c, HEME C
著者Naiyer, A, Islam, A, Hassan, M.I, Sundd, M, Ahmad, F.
登録日2018-03-26
公開日2019-05-22
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of molten globule state of L94G mutant of horse cytochrome-c
To Be Published
5Z25
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BU of 5z25 by Molmil
Trimeric Alpha-Helix-Inserted Circular Permutant of Cytochrome c555
分子名称: Cytochrome c552, HEME C, TETRAETHYLENE GLYCOL
著者Oda, A, Nagao, S, Yamanaka, M, Ueda, I, Shibata, N, Higuchi, Y, Hirota, S.
登録日2017-12-28
公開日2018-03-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Construction of a Triangle-Shaped Trimer and a Tetrahedron Using an alpha-Helix-Inserted Circular Permutant of Cytochrome c555.
Chem Asian J, 13, 2018
5XED
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BU of 5xed by Molmil
Heterodimer constructed from M61A PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins
分子名称: Cytochrome c-551,Cytochrome c-552, Cytochrome c-552,Cytochrome c-551, HEME C
著者Zhang, M, Nakanishi, T, Yamanaka, M, Nagao, S, Yanagisawa, S, Shomura, Y, Shibata, N, Ogura, T, Higuchi, Y, Hirota, S.
登録日2017-04-04
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins.
Chembiochem, 18, 2017
5XEC
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BU of 5xec by Molmil
Heterodimer constructed from PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins
分子名称: Cytochrome c-551,Cytochrome c-552, Cytochrome c-552,Cytochrome c-551, HEME C
著者Zhang, M, Nakanishi, T, Yamanaka, M, Nagao, S, Yanagisawa, S, Shomura, Y, Shibata, N, Ogura, T, Higuchi, Y, Hirota, S.
登録日2017-04-04
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins.
Chembiochem, 18, 2017
5WVE
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BU of 5wve by Molmil
Apaf-1-Caspase-9 holoenzyme
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Apoptotic protease-activating factor 1, Caspase, ...
著者Li, Y, Zhou, M, Hu, Q, Shi, Y.
登録日2016-12-24
公開日2017-02-08
最終更新日2017-03-01
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Mechanistic insights into caspase-9 activation by the structure of the apoptosome holoenzyme
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TY3
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BU of 5ty3 by Molmil
Crystal structure of K72A variant of Human Cytochrome c
分子名称: Cytochrome c, HEME C, SULFATE ION
著者Mou, T.C, Nold, S.M, Lei, H, Sprang, S.R, Bowler, B.E.
登録日2016-11-18
公開日2017-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Effect of a K72A Mutation on the Structure, Stability, Dynamics, and Peroxidase Activity of Human Cytochrome c.
Biochemistry, 56, 2017
5T8W
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BU of 5t8w by Molmil
Cytochrome c - calixarene free
分子名称: CHLORIDE ION, Cyc1p, HEME C
著者Doolan, A.M, Rennie, M.L, Crowley, P.B.
登録日2016-09-08
公開日2017-11-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Protein Recognition by Functionalized Sulfonatocalix[4]arenes.
Chemistry, 24, 2018
5T7H
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BU of 5t7h by Molmil
Crystal structure of dimeric yeast iso-1-cytochrome C with CYMAL6
分子名称: 6-cyclohexylhexan-1-ol, Cytochrome c iso-1, HEME C, ...
著者Mcclelland, L, Mou, T.C, Sprang, S.R, Bowler, B.E.
登録日2016-09-05
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Cytochrome c Can Form a Well-Defined Binding Pocket for Hydrocarbons.
J. Am. Chem. Soc., 138, 2016
5OCF
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BU of 5ocf by Molmil
Crystal structure of nitric oxide bound to three-domain heme-Cu nitrite reductase from Ralstonia pickettii
分子名称: COPPER (II) ION, HEME C, NITRIC OXIDE, ...
著者Dong, J, Sasaki, D, Eady, R, Antonyuk, S.V, Hasnain, S.S.
登録日2017-06-30
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Activation of redox tyrosine switch is required for ligand binding at the catalytic site in heme-cu nitrite reductases
To be published
5OCB
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BU of 5ocb by Molmil
Crystal structure of nitric oxide bound D97N mutant of three-domain heme-Cu nitrite reductase from Ralstonia pickettii
分子名称: COPPER (II) ION, HEME C, NITRIC OXIDE, ...
著者Dong, J, Sasaki, D, Eady, R, Antonyuk, S.V, Hasnain, S.S.
登録日2017-06-30
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Activation of redox tyrosine switch is required for ligand binding at the catalytic site in heme-cu nitrite reductases
To be published
5OBO
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BU of 5obo by Molmil
Crystal structure of nitrite bound D97N mutant of three-domain heme-Cu nitrite reductase from Ralstonia pickettii
分子名称: COPPER (II) ION, GLYCEROL, HEME C, ...
著者Dong, J, Sasaki, D, Eady, R, Antonyuk, S.V, Hasnain, S.S.
登録日2017-06-28
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Activation of redox tyrosine switch is required for ligand binding at the catalytic site in heme-cu nitrite reductases
To be published
5O10
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BU of 5o10 by Molmil
Y48H mutant of human cytochrome c
分子名称: Cytochrome c, HEME C
著者Moreno-Chicano, T, Deacon, O.M, Hough, M.A, Worrall, J.A.R.
登録日2017-05-17
公開日2018-03-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Heightened Dynamics of the Oxidized Y48H Variant of Human Cytochrome c Increases Its Peroxidatic Activity.
Biochemistry, 56, 2017
5NCV
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BU of 5ncv by Molmil
Crystal Structure of Cytochrome c in complex with p-Methylphosphonatocalix[4]arene
分子名称: CHLORIDE ION, Cytochrome c iso-1, HEME C, ...
著者Alex, J.M, Rennie, M.L, Crowley, P.B.
登録日2017-03-06
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Phosphonated Calixarene as a ""Molecular Glue"" for Protein Crystallization
Cryst.Growth Des., 18, 2018
5N1T
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Crystal structure of complex between flavocytochrome c and copper chaperone CopC from T. paradoxus
分子名称: COPPER (II) ION, CopC, Cytochrome C, ...
著者Osipov, E.M, Lilina, A.V, Tikhonova, T.V, Tsallagov, S.I, Popov, V.O.
登録日2017-02-06
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the flavocytochrome c sulfide dehydrogenase associated with the copper-binding protein CopC from the haloalkaliphilic sulfur-oxidizing bacterium Thioalkalivibrio paradoxusARh 1.
Acta Crystallogr D Struct Biol, 74, 2018

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