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4XMX
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BU of 4xmx by Molmil
Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with Bestatin
Descriptor: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, Aminopeptidase N, GLYCEROL, ...
Authors:Addlagatta, A, Gumpena, R, Kishor, C.
Deposit date:2015-01-15
Release date:2016-02-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with Bestatin
To Be Published
4XN5
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BU of 4xn5 by Molmil
Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Phenylalanine
Descriptor: Aminopeptidase N, GLYCEROL, MALONATE ION, ...
Authors:Addlagatta, A, Gumpena, R, Kishor, C.
Deposit date:2015-01-15
Release date:2016-02-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Phenylalanine
To Be Published
4XMW
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BU of 4xmw by Molmil
Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-aspartic acid
Descriptor: ASPARTIC ACID, Aminopeptidase N, GLYCEROL, ...
Authors:Addlagatta, A, Gumpena, R, Kishor, C.
Deposit date:2015-01-15
Release date:2016-02-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-aspartic acid
To Be Published
4XMV
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BU of 4xmv by Molmil
Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Arginine
Descriptor: ARGININE, Aminopeptidase N, GLYCEROL, ...
Authors:Addlagatta, A, Gumpena, R, Kishor, C.
Deposit date:2015-01-15
Release date:2016-02-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-arginine
To Be Published
4XN1
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BU of 4xn1 by Molmil
Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Glutamate
Descriptor: Aminopeptidase N, GLUTAMIC ACID, MALONATE ION, ...
Authors:Addlagatta, A, Gumpena, R.
Deposit date:2015-01-15
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Glutamate
To Be Published
4XNB
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BU of 4xnb by Molmil
Crystal Structure of E. coli Aminopeptidase N in complex with L-Beta Homophenylalanine
Descriptor: (3S)-3-AMINO-4-PHENYLBUTANOIC ACID, Aminopeptidase N, GLYCEROL, ...
Authors:Addlagatta, A, Gumpena, R.
Deposit date:2015-01-15
Release date:2016-03-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of E. coli Aminopeptidase N in complex with L-Beta Homophenylalanine
To Be Published
4XO5
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BU of 4xo5 by Molmil
Crystal Structure of E. coli Aminopeptidase N in complex with L-Glutamate
Descriptor: Aminopeptidase N, GLUTAMIC ACID, GLYCEROL, ...
Authors:Addlagatta, A, Gumpena, R.
Deposit date:2015-01-16
Release date:2016-01-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal Structure of E. coli Aminopeptidase N in complex with L-Glutamate
To Be Published
3FH4
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BU of 3fh4 by Molmil
Crystal Structure of Recombinant Vibrio proteolyticus aminopeptidase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bacterial leucyl aminopeptidase, SODIUM ION, ...
Authors:Yong, W, Kim, J.-J.P, Hartley, M, Bennett, B.
Deposit date:2008-12-08
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Heterologous expression and purification of Vibrio proteolyticus (Aeromonas proteolytica) aminopeptidase: a rapid protocol
Protein Expr.Purif., 66, 2009
3NXZ
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BU of 3nxz by Molmil
Crystal Structure of UreE from Helicobacter pylori (Cu2+ bound form)
Descriptor: COPPER (II) ION, Urease accessory protein ureE
Authors:Shi, R, Munger, C, Assinas, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2010-07-14
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Apo and Metal-Bound Forms of the UreE Protein from Helicobacter pylori: Role of Multiple Metal Binding Sites
Biochemistry, 49, 2010
3MCD
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BU of 3mcd by Molmil
Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Descriptor: Cell division topological specificity factor
Authors:Kang, G.B, Song, H.E, Kim, M.K, Youn, H.S, Lee, J.G, An, J.Y, Jeon, H, Chun, J.S, Eom, S.H.
Deposit date:2010-03-29
Release date:2010-05-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Mol.Microbiol., 76, 2010
2E5B
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BU of 2e5b by Molmil
Crystal structure of Human NMPRTase as free-form
Descriptor: Nicotinamide phosphoribosyltransferase
Authors:Takahashi, R, Nakamura, S, Kobayashi, Y, Ohkubo, T.
Deposit date:2006-12-20
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and reaction mechanism of human nicotinamide phosphoribosyltransferase
J.Biochem., 147, 2010
3O1Q
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BU of 3o1q by Molmil
Native Crystal Structure of Helicobacter pylori Urease Accessory Protein UreF
Descriptor: Urease accessory protein ureF
Authors:Fong, Y.H, Chen, Y.W, Wong, K.B.
Deposit date:2010-07-21
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Assembly of Preactivation Complex for Urease Maturation in Helicobacter pylori: CRYSTAL STRUCTURE OF UreF-UreH PROTEIN COMPLEX.
J.Biol.Chem., 286, 2011
3MLI
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2ouf-ds, a disulfide-linked dimer of Helicobacter pylori protein HP0242
Descriptor: CALCIUM ION, Putative uncharacterized protein
Authors:King, N.P, Sawaya, M.R, Jacobitz, A.W, Yeates, T.O.
Deposit date:2010-04-16
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and folding of a designed knotted protein.
Proc.Natl.Acad.Sci.USA, 107, 2010
3M34
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BU of 3m34 by Molmil
Crystal structure of transketolase in complex with thiamin diphosphate and calcium ion
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Nocek, B, Makowska-Grzyska, M, Maltseva, N, Grimshaw, S, Joachimiak, A, Anderson, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-03-08
Release date:2010-04-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of transketolase in complex with thiamin diphosphate and calcium ion
To be Published
3MLE
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BU of 3mle by Molmil
Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori cocrystallized with ATP
Descriptor: 8-aminooctanoic acid, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Nicholls, R, Porebski, P.J, Klimecka, M.M, Chruszcz, M, Murzyn, K, Joachimiak, A, Murshudov, G, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-04-16
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members.
Febs J., 279, 2012
3M7I
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BU of 3m7i by Molmil
Crystal structure of transketolase in complex with thiamine diphosphate, ribose-5-phosphate(pyranose form) and magnesium ion
Descriptor: 1,2-ETHANEDIOL, 5-O-phosphono-beta-D-ribofuranose, MAGNESIUM ION, ...
Authors:Nocek, B, Makowska-Grzyska, M, Maltseva, N, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-03-16
Release date:2010-04-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of transketolase in complex with thiamine diphosphate, ribose-5-phosphate(pyranose form) and magnesium ion
TO BE PUBLISHED
3NM6
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BU of 3nm6 by Molmil
Helicobacter pylori MTAN complexed with adenine and tris
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENINE, ...
Authors:Ronning, D.R, Iacopelli, N.M.
Deposit date:2010-06-21
Release date:2010-11-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Enzyme-ligand interactions that drive active site rearrangements in the Helicobacter pylori 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase.
Protein Sci., 19, 2010
3MYD
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BU of 3myd by Molmil
Structure of the Cytoplasmic domain of FlhA from Helicobacter pylori
Descriptor: Flagellar biosynthesis protein flhA
Authors:Moore, S.A, Jia, Y.
Deposit date:2010-05-10
Release date:2010-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the cytoplasmic domain of the flagellar secretion apparatus component FlhA from Helicobacter pylori.
J.Biol.Chem., 285, 2010
2E5D
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BU of 2e5d by Molmil
Crystal structure of Human NMPRTase complexed with nicotinamide
Descriptor: NICOTINAMIDE, Nicotinamide phosphoribosyltransferase
Authors:Takahashi, R, Nakamura, S, Kobayashi, Y, Ohkubo, T.
Deposit date:2006-12-20
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and reaction mechanism of human nicotinamide phosphoribosyltransferase
J.Biochem., 147, 2010
4X8I
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BU of 4x8i by Molmil
de novo crystal structure of the Pyrococcus Furiosus TET3 aminopeptidase
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, COBALT (II) ION, ...
Authors:Colombo, M.
Deposit date:2014-12-10
Release date:2016-02-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tuned by metals: the TET peptidase activity is controlled by 3 metal binding sites.
Sci Rep, 6, 2016
3OQG
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BU of 3oqg by Molmil
Restriction endonuclease HPY188I in complex with substrate DNA
Descriptor: CHLORIDE ION, DNA 5'-D(*GP*AP*TP*CP*TP*GP*AP*AP*C)-3', DNA 5'-D(*GP*TP*TP*CP*AP*GP*AP*TP*C)-3', ...
Authors:Sokolowska, M, Czapinska, H, Bochtler, M.
Deposit date:2010-09-03
Release date:2010-10-20
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis.
Nucleic Acids Res., 39, 2011
2H7Q
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BU of 2h7q by Molmil
Cytochrome P450cam complexed with imidazole
Descriptor: Cytochrome P450-cam, IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Verras, A, Alian, A, Montellano, P.R.
Deposit date:2006-06-02
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Cytochrome P450 active site plasticity: attenuation of imidazole binding in cytochrome P450cam by an L244A mutation.
Protein Eng.Des.Sel., 19, 2006
5HAI
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BU of 5hai by Molmil
P99 beta-lactamase mutant - S64G
Descriptor: Beta-lactamase, PHOSPHATE ION
Authors:Stojanoski, V, Adamski, C.J, Hu, L, Mehta, S.C, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
Deposit date:2015-12-30
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Removal of the Side Chain at the Active-Site Serine by a Glycine Substitution Increases the Stability of a Wide Range of Serine beta-Lactamases by Relieving Steric Strain.
Biochemistry, 55, 2016
3M21
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BU of 3m21 by Molmil
Crystal structure of DmpI from Helicobacter pylori Determined to 1.9 Angstroms resolution
Descriptor: Probable tautomerase HP_0924
Authors:Hackert, M.L, Whitman, C.P, Almrud, J.J, Dasgupta, R, Kern, A.D, Czerwinski, R.M.
Deposit date:2010-03-06
Release date:2010-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Kinetic and structural characterization of DmpI from Helicobacter pylori and Archaeoglobus fulgidus, two 4-oxalocrotonate tautomerase family members.
Bioorg.Chem., 38, 2010
4ZQT
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Crystal structure of PfA-M1 with virtual ligand inhibitor
Descriptor: (2R)-2-{[(R)-[(R)-amino(phenyl)methyl](hydroxy)phosphoryl]methyl}-4-methylpentanoic acid, GLYCEROL, M1 family aminopeptidase, ...
Authors:Ruggeri, C, Drinkwater, N, McGowan, S.
Deposit date:2015-05-11
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.981 Å)
Cite:Identification and Validation of a Potent Dual Inhibitor of the P. falciparum M1 and M17 Aminopeptidases Using Virtual Screening.
Plos One, 10, 2015

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PDB entries from 2024-09-04

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