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7OIU
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BU of 7oiu by Molmil
Inner Membrane Complex (IMC) protomer structure (TrwM/VirB3, TrwK/VirB4, TrwG/VirB8tails) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwG protein, TrwK protein, TrwM protein
Authors:Mace, K, Vadakkepat, A.K, Lukoyanova, N, Waksman, G.
Deposit date:2021-05-12
Release date:2022-06-22
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of a type IV secretion system.
Nature, 607, 2022
7Q1V
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BU of 7q1v by Molmil
Arches protomer (trimer of TrwG/VirB8peri) structure from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwG protein
Authors:Mace, K, Vadakkepat, A.K, Lukoyanova, N, Waksman, G.
Deposit date:2021-10-21
Release date:2022-06-22
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (6.18 Å)
Cite:Cryo-EM structure of a type IV secretion system.
Nature, 607, 2022
1Z9S
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BU of 1z9s by Molmil
Crystal Structure of the native chaperone:subunit:subunit Caf1M:Caf1:Caf1 complex
Descriptor: Chaperone protein Caf1M, F1 capsule antigen
Authors:Zavialov, A.V, Tischenko, V.M, Fooks, L.J, Brandsdal, B.O, Aqvist, J, Zav'yalov, V.P, Macintyre, S, Knight, S.D.
Deposit date:2005-04-04
Release date:2005-06-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Resolving the energy paradox of chaperone/usher-mediated fibre assembly
Biochem.J., 389, 2005
3DSN
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BU of 3dsn by Molmil
Crystal structure of the complex of the Caf1M chaperone with the mini-fiber of two Caf1 subunits (Caf1:Caf1), carrying the Thr7Phe mutation in the Gd donor strand
Descriptor: Chaperone protein caf1M, F1 capsule antigen
Authors:Fooks, L.J, Yu, X, Moslehi-Mohebi, E, Tischenko, V, Knight, S.D, MacIntyre, S, Zavialov, A.V.
Deposit date:2008-07-13
Release date:2009-07-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hydrophobicity and rigidity of binding segments enable CAF1M chaperone to act as assembly catalyst
To be Published
3DOS
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BU of 3dos by Molmil
Crystal structure of the complex of the Caf1M chaperone with the mini-fiber of two Caf1 subunits (Caf1:Caf1), carrying the Thr7Phe and Ala9Val mutations in the Gd donor strand
Descriptor: Chaperone protein caf1M, F1 capsule antigen
Authors:Fooks, L.J, Yu, X, Moslehi-Mohebi, E, Tischenko, V, Knight, S.D, MacIntyre, S, Zavialov, A.V.
Deposit date:2008-07-06
Release date:2009-07-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Hydrophobicity and rigidity of binding segments enable CAF1M chaperone to act as assembly catalyst
TO BE PUBLISHED
3DPB
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BU of 3dpb by Molmil
Crystal structure of the complex of the Caf1M chaperone with the mini-fiber of two Caf1 subunits (Caf1:Caf1), carrying the Ala9Val, Ala11Val, and Leu13Val mutations in the Gd donor strand
Descriptor: Chaperone protein caf1M, F1 capsule antigen
Authors:Fooks, L.J, Yu, X, Moslehi-Mohebi, E, Tischenko, V, Knight, S.D, MacIntyre, S, Zavialov, A.V.
Deposit date:2008-07-07
Release date:2009-07-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hydrophobicity and rigidity of binding segments enable CAF1M chaperone to act as assembly catalyst
To be published
4IJY
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BU of 4ijy by Molmil
Crystal Structure of the ETEC Secreted Protein CofJ
Descriptor: CofJ, GLYCEROL, IODIDE ION
Authors:Craig, L, Kolappan, S, Yuen, A.S.W.
Deposit date:2012-12-24
Release date:2013-10-16
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and secretion of CofJ, a putative colonization factor of enterotoxigenic Escherichia coli.
Mol.Microbiol., 90, 2013
4DJM
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BU of 4djm by Molmil
Crystal structure of the E. coli chaperone DraB
Descriptor: DraB
Authors:Dauter, Z, Piatek, R, Dauter, M, Brzuszkiewicz, A.
Deposit date:2012-02-02
Release date:2013-01-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal structure of the uropathogenic Escherichia coli chaperone DraB
To be Published
6BBK
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BU of 6bbk by Molmil
N-terminally truncated group I PilA from Pseudomonas aeruginosa strain 1244
Descriptor: Fimbrial protein
Authors:Shen, Y, Guarne, A, Nguyen, Y, Burrows, L.L.
Deposit date:2017-10-18
Release date:2018-11-21
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:N-terminally truncated group I PilA from Pseudomonas aeruginosa strain 1244
To Be Published
2X9B
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BU of 2x9b by Molmil
The filamentous phages fd and IF1 use different infection mechanisms
Descriptor: ATTACHMENT PROTEIN G3P
Authors:Lorenz, S.H, Jakob, R.P, Weininger, U, Dobbek, H, Schmid, F.X.
Deposit date:2010-03-15
Release date:2010-12-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:The Filamentous Phages Fd and If1 Use Different Mechanisms to Infect Escherichia Coli.
J.Mol.Biol., 405, 2011
2X9A
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BU of 2x9a by Molmil
crystal structure of g3p from phage IF1 in complex with its coreceptor, the C-terminal domain of TolA
Descriptor: ATTACHMENT PROTEIN G3P, MEMBRANE SPANNING PROTEIN, REQUIRED FOR OUTER MEMBRANE INTEGRITY
Authors:Lorenz, S.H, Jakob, R.P, Dobbek, H, Schmid, F.X.
Deposit date:2010-03-15
Release date:2010-12-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:The Filamentous Phages Fd and If1 Use Different Mechanisms to Infect Escherichia Coli.
J.Mol.Biol., 405, 2011
4AYF
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BU of 4ayf by Molmil
Crystal structure of the complex of the Caf1M:Caf1 chaperone:subunit preassembly complex carrying the Tyr40Ala mutation in the Caf1M chaperone
Descriptor: CHAPERONE PROTEIN CAF1M, F1 CAPSULE ANTIGEN
Authors:Yu, X.D, Dubnovitsky, A, Pudney, A.F, MacIntyre, S, Knight, S.D, Zavialov, A.V.
Deposit date:2012-06-20
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Allosteric Mechanism Controls Traffic in the Chaperone/Usher Pathway.
Structure, 20, 2012
4AZ8
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BU of 4az8 by Molmil
Crystal structure of the complex of the Caf1M:Caf1 chaperone:subunit preassembly complex carrying the KDKDTN insertion at the F1G1 loop region
Descriptor: CHAPERONE PROTEIN CAF1M, F1 CAPSULE ANTIGEN
Authors:Yu, X.D, Dubnovitsky, A, Pudney, A.F, MacIntyre, S, Knight, S.D, Zavialov, A.V.
Deposit date:2012-06-24
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Allosteric Mechanism Controls Traffic in the Chaperone/Usher Pathway.
Structure, 20, 2012
2OS7
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BU of 2os7 by Molmil
Caf1M periplasmic chaperone tetramer
Descriptor: Chaperone protein caf1M
Authors:Knight, S.D, Zavialov, A.Z.
Deposit date:2007-02-05
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A novel self-capping mechanism controls aggregation of periplasmic chaperone Caf1M
MOL.MICROBIOL., 64, 2007
8ODN
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BU of 8odn by Molmil
RcpA-TadD with C13 symmetry from the Pseudomonas aeruginosa Tight Adherence Secretion System
Descriptor: RcpA, TPR repeat-containing protein PA4299
Authors:Tassinari, M, Low, H.H.
Deposit date:2023-03-09
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Assembly mechanism of a Tad secretion system secretin-pilotin complex.
Nat Commun, 14, 2023
7F87
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BU of 7f87 by Molmil
Crystal structure of housekeeping sortase SrtA bound with self derived tripeptide from Lactobacillus rhamnosus GG
Descriptor: 1,2-ETHANEDIOL, Class A sortase, PHOSPHATE ION, ...
Authors:Pratap, S, Krishnan, V.
Deposit date:2021-07-01
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of housekeeping sortase SrtA bound with self derived tripeptide from Lactobacillus rhamnosus GG
To Be Published
4AY0
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BU of 4ay0 by Molmil
High resolution crystal structure of the monomeric subunit-free Caf1M chaperone
Descriptor: CHAPERONE PROTEIN CAF1M
Authors:Yu, X.D, Dubnovitsky, A, Pudney, A.F, MacIntyre, S, Knight, S.D, Zavialov, A.V.
Deposit date:2012-06-16
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Allosteric Mechanism Controls Traffic in the Chaperone/Usher Pathway.
Structure, 20, 2012
8RKO
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BU of 8rko by Molmil
Bacteriophage JBD30 empty particle capsid
Descriptor: Bacteriophage Mu GpT domain-containing protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-27
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30.
Embo J., 2024
8RK5
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BU of 8rk5 by Molmil
Tail fibres of bacteriophage JBD30
Descriptor: Virion structural protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (4.54 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30.
Embo J., 2024
8RKA
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BU of 8rka by Molmil
Connector complex of empty bacteriophage JBD30 particle computed in C12 symmetry
Descriptor: DUF1320 domain-containing protein, Portal protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30.
Embo J., 2024
8RK8
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BU of 8rk8 by Molmil
Tail of bacteriophage JBD30 computed in C6 symmetry
Descriptor: Major tail protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30.
Embo J., 2024
8RK6
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BU of 8rk6 by Molmil
Baseplate core of bacteriophage JBD30 computed in C3 symmetry
Descriptor: DUF2163 domain-containing protein, FE (III) ION, Tip attachment protein J domain-containing protein, ...
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30.
Embo J., 2024
8RKC
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BU of 8rkc by Molmil
Capsid of bacteriophage JBD30 decorated with minor capsid protein trimers computed in I4 symmetry
Descriptor: Bacteriophage Mu GpT domain-containing protein, Mu-like prophage FluMu N-terminal domain-containing protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30.
Embo J., 2024
8RKX
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BU of 8rkx by Molmil
Procapsid of bacteriophage JBD30 computed in I4 symmetry
Descriptor: Bacteriophage Mu GpT domain-containing protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-30
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (4.01 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30.
Embo J., 2024
8RKN
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BU of 8rkn by Molmil
Bacteriophage JBD30 capsid
Descriptor: Bacteriophage Mu GpT domain-containing protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-27
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30.
Embo J., 2024

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PDB entries from 2024-09-11

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