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6P5G
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BU of 6p5g by Molmil
Photoactive Yellow Protein PYP Dark Full
Descriptor: Photoactive yellow protein
Authors:Pandey, S, Schmidt, M.
Deposit date:2019-05-30
Release date:2019-09-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Time-resolved serial femtosecond crystallography at the European XFEL.
Nat.Methods, 17, 2020
6P5F
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BU of 6p5f by Molmil
Photoactive Yellow Protein PYP Pure Dark
Descriptor: Photoactive yellow protein
Authors:Pandey, S, Schmidt, M.
Deposit date:2019-05-30
Release date:2019-09-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Time-resolved serial femtosecond crystallography at the European XFEL.
Nat.Methods, 17, 2020
6P5E
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BU of 6p5e by Molmil
Photoactive Yellow Protein PYP 80ps
Descriptor: Photoactive yellow protein
Authors:Pandey, S, Schmidt, M.
Deposit date:2019-05-30
Release date:2019-09-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Time-resolved serial femtosecond crystallography at the European XFEL.
Nat.Methods, 17, 2020
6P5D
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BU of 6p5d by Molmil
Photoactive Yellow Protein PYP 30ps
Descriptor: Photoactive yellow protein
Authors:Pandey, S, Schmidt, M.
Deposit date:2019-05-30
Release date:2019-09-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Time-resolved serial femtosecond crystallography at the European XFEL.
Nat.Methods, 17, 2020
2QWS
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BU of 2qws by Molmil
Neutron and X-ray structural studies of short hydrogen bonds in Photoactive Yellow Protein (PYP)
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Fisher, S.Z, Langan, P.
Deposit date:2007-08-10
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Neutron and X-ray structural studies of short hydrogen bonds in photoactive yellow protein (PYP)
Acta Crystallogr.,Sect.D, 63, 2007
2QJ7
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BU of 2qj7 by Molmil
PYP ultra-high resolution of a bacterial photoreceptor
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Coureux, P.D, Fan, Z.P, Stojanoff, V, Genick, U.K.
Deposit date:2007-07-06
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Picometer-scale conformational heterogeneity separates functional from nonfunctional States of a photoreceptor protein.
Structure, 16, 2008
5HD5
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BU of 5hd5 by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 200 ns time delay photo-activated (light) structure
Descriptor: Photoactive yellow protein
Authors:Pande, K, Tenboer, J, Schmidt, M.
Deposit date:2016-01-04
Release date:2016-05-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
3A0V
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BU of 3a0v by Molmil
PAS domain of histidine kinase ThkA (TM1359) (SeMet, F486M/F489M)
Descriptor: ETHANOL, Sensor protein
Authors:Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y.
Deposit date:2009-03-24
Release date:2009-10-20
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of PAS-linked histidine kinase and the response regulator complex
Structure, 17, 2009
3A0S
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BU of 3a0s by Molmil
PAS domain of histidine kinase ThkA (TM1359)
Descriptor: DI(HYDROXYETHYL)ETHER, Sensor protein, TETRAETHYLENE GLYCOL, ...
Authors:Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y.
Deposit date:2009-03-24
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure of PAS-linked histidine kinase and the response regulator complex
Structure, 17, 2009
5HD3
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BU of 5hd3 by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: Dark structure of photoactive yellow protein
Descriptor: Photoactive yellow protein
Authors:Pande, K, Tenboer, J, Schmidt, M.
Deposit date:2016-01-04
Release date:2016-05-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
5HDS
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BU of 5hds by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 3 ps Structure
Descriptor: Photoactive yellow protein
Authors:Pande, K, Tenboer, J, Schmidt, M.
Deposit date:2016-01-05
Release date:2016-05-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
2ZOI
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BU of 2zoi by Molmil
Neutron Crystal Structure of Photoactive Yellow Protein, Wild type, at 295K
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Yamaguchi, S.
Deposit date:2008-05-21
Release date:2009-03-24
Last modified:2023-11-01
Method:NEUTRON DIFFRACTION (1.5 Å)
Cite:Low-barrier hydrogen bond in photoactive yellow protein
Proc.Natl.Acad.Sci.USA, 106, 2009
2OWH
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BU of 2owh by Molmil
Structure of an early-microsecond photolyzed state of CO-bjFixLH
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Sensor protein fixL
Authors:Key, J, Srajer, V, Pahl, R, Moffat, K.
Deposit date:2007-02-16
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Time-resolved crystallographic studies of the heme domain of the oxygen sensor FixL: structural dynamics of ligand rebinding and their relation to signal transduction.
Biochemistry, 46, 2007
2W0N
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BU of 2w0n by Molmil
Plasticity of PAS domain and potential role for signal transduction in the histidine-kinase DcuS
Descriptor: SENSOR PROTEIN DCUS
Authors:Etzkorn, M, Kneuper, H, Duennwald, P, Vijayan, V, Kraemer, J, Griesinger, C, Becker, S, Unden, G, Baldus, M.
Deposit date:2008-08-19
Release date:2008-09-30
Last modified:2013-07-24
Method:SOLID-STATE NMR
Cite:Plasticity of the Pas Domain and a Potential Role for Signal Transduction in the Histidine Kinase Dcus.
Nat.Struct.Mol.Biol., 15, 2008
2VV8
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BU of 2vv8 by Molmil
Co-bound structure of bjFixLH
Descriptor: CARBON MONOXIDE, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ayers, R.A, Moffat, K.
Deposit date:2008-06-04
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains.
Biochemistry, 47, 2008
5HDC
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BU of 5hdc by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 100 fs to 400 fs Structure
Descriptor: Photoactive yellow protein
Authors:Pande, K, Tenboer, J, Schmidt, M.
Deposit date:2016-01-05
Release date:2016-05-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
5HDD
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BU of 5hdd by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 800 fs to 1200 fs Structure
Descriptor: Photoactive yellow protein
Authors:Pande, K, Tenboer, J, Schmidt, M.
Deposit date:2016-01-05
Release date:2016-05-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
5IU1
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BU of 5iu1 by Molmil
N-terminal PAS domain homodimer of PpANR MAP3K from Physcomitrella patens.
Descriptor: CTR1-like protein, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Stevenson, R.R, Trinh, C.H, Edwards, T.A, Cuming, A.C.
Deposit date:2016-03-17
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance.
Plant Cell, 28, 2016
2OWJ
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BU of 2owj by Molmil
Structure of an early-microsecond photolyzed state of CO-bjFixLH, dark state
Descriptor: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, Sensor protein fixL
Authors:Key, J, Srajer, V, Pahl, R, Moffat, K.
Deposit date:2007-02-16
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Time-resolved crystallographic studies of the heme domain of the oxygen sensor FixL: structural dynamics of ligand rebinding and their relation to signal transduction.
Biochemistry, 46, 2007
2VV7
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BU of 2vv7 by Molmil
BJFIXLH IN UNLIGANDED FERROUS FORM
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SENSOR PROTEIN FIXL, ...
Authors:Ayers, R.A, Moffat, K.
Deposit date:2008-06-04
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains.
Biochemistry, 47, 2008
3B33
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BU of 3b33 by Molmil
Crystal structure of the PAS domain of nitrogen regulation protein NR(II) from Vibrio parahaemolyticus
Descriptor: Sensor protein
Authors:Osipiuk, J, Sather, A, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-10-19
Release date:2007-10-30
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:X-ray structure of PAS domain of nitrogen regulation protein NR(II) from Vibrio parahaemolyticus.
To be Published
2ZOH
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BU of 2zoh by Molmil
X-ray Crystal Structure of Photoactive Yellow Protein, Wild type, at 295K
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Yamaguchi, S.
Deposit date:2008-05-20
Release date:2009-03-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Low-barrier hydrogen bond in photoactive yellow protein
Proc.Natl.Acad.Sci.USA, 106, 2009
2VV6
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BU of 2vv6 by Molmil
BJFIXLH IN FERRIC FORM
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SENSOR PROTEIN FIXL, ...
Authors:Ayers, R.A, Moffat, K.
Deposit date:2008-06-04
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains.
Biochemistry, 47, 2008
2PYR
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BU of 2pyr by Molmil
PHOTOACTIVE YELLOW PROTEIN, 1 NANOSECOND INTERMEDIATE (287K)
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Perman, B, Srajer, V, Ren, Z, Teng, T.Y, Pradervand, C, Ursby, T, Bourgeois, D, Schotte, F, Wulff, M, Kort, R, Hellingwerf, K, Moffat, K.
Deposit date:1998-03-04
Release date:1999-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Energy transduction on the nanosecond time scale: early structural events in a xanthopsin photocycle.
Science, 279, 1998
2PYP
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BU of 2pyp by Molmil
PHOTOACTIVE YELLOW PROTEIN, PHOTOSTATIONARY STATE, 50% GROUND STATE, 50% BLEACHED
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Genick, U.K, Borgstahl, G.E.O, Ng, K, Ren, Z, Pradervand, C, Burke, P, Srajer, V, Teng, T, Schildkamp, W, Mcree, D.E, Moffat, K, Getzoff, E.D.
Deposit date:1997-02-03
Release date:1998-04-29
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a protein photocycle intermediate by millisecond time-resolved crystallography.
Science, 275, 1997

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