Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7MLT
DownloadVisualize
BU of 7mlt by Molmil
Crystal structure of ricin A chain in complex with 5-(2-ethylphenyl)thiophene-2-carboxylic acid
Descriptor: 1,2-ETHANEDIOL, 5-(2-ethylphenyl)thiophene-2-carboxylic acid, CHLORIDE ION, ...
Authors:Harijan, R.K, Li, X.P, Cao, B, Augeri, D, Bonanno, J.B, Almo, S.C, Tumer, N.E, Schramm, V.L.
Deposit date:2021-04-29
Release date:2022-02-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis and Structural Characterization of Ricin Inhibitors Targeting Ribosome Binding Using Fragment-Based Methods and Structure-Based Design.
J.Med.Chem., 64, 2021
5J56
DownloadVisualize
BU of 5j56 by Molmil
RTA-V1C7
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Rudolph, M.J.
Deposit date:2016-04-01
Release date:2016-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Analysis of Single Domain Antibodies Bound to a Second Neutralizing Hot Spot on Ricin Toxin's Enzymatic Subunit.
J. Biol. Chem., 292, 2017
7TGF
DownloadVisualize
BU of 7tgf by Molmil
Single-domain VHH intrabodies neutralize ricin toxin.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Ricin chain A, ...
Authors:Rudolph, M.J, Mantis, N.
Deposit date:2022-01-07
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.347 Å)
Cite:Single-domain antibodies neutralize ricin toxin intracellularly by blocking access to ribosomal P-stalk proteins.
J.Biol.Chem., 298, 2022
7TGI
DownloadVisualize
BU of 7tgi by Molmil
Single-domain VHH intrabodies neutralize ricin toxin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Ricin chain A, ...
Authors:Rudolph, M.J.
Deposit date:2022-01-07
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Single-domain antibodies neutralize ricin toxin intracellularly by blocking access to ribosomal P-stalk proteins.
J.Biol.Chem., 298, 2022
7TH3
DownloadVisualize
BU of 7th3 by Molmil
Single-domain VHH intrabodies neutralize ricin toxin
Descriptor: Ricin chain A, VHH antibody
Authors:Rudolph, M.J.
Deposit date:2022-01-10
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.292 Å)
Cite:Single-domain antibodies neutralize ricin toxin intracellularly by blocking access to ribosomal P-stalk proteins.
J.Biol.Chem., 298, 2022
7TH2
DownloadVisualize
BU of 7th2 by Molmil
Single-domain VHH intrabodies neutralize ricin toxin
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Rudolph, M.J, Mantis, N.
Deposit date:2022-01-10
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.838 Å)
Cite:Single-domain antibodies neutralize ricin toxin intracellularly by blocking access to ribosomal P-stalk proteins.
J.Biol.Chem., 298, 2022
5E1H
DownloadVisualize
BU of 5e1h by Molmil
Ricin toxin in complex with neutralizing single chain monoclonal antibodies (VHHs)
Descriptor: CHLORIDE ION, F8(JOB10) VHH antibody, Ricin
Authors:Rudolph, M.J, Vance, D, Shoemaker, C, Mantis, N.
Deposit date:2015-09-29
Release date:2016-08-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.032 Å)
Cite:Structural analysis of nested neutralizing and non-neutralizing B cell epitopes on ricin toxin's enzymatic subunit.
Proteins, 84, 2016
5GU4
DownloadVisualize
BU of 5gu4 by Molmil
rRNA N-glycosylase RTA
Descriptor: GLY-PHE-GLY-LEU-PHE-ASP, GLYCEROL, Ricin
Authors:Shi, W.W, Tang, Y.S, Sze, S.Y, Zhu, Z.N, Wong, K.B, Shaw, P.C.
Deposit date:2016-08-24
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Ribosome-Inactivating Protein Ricin A Chain in Complex with the C-Terminal Peptide of the Ribosomal Stalk Protein P2
Toxins, 8, 2016
6URW
DownloadVisualize
BU of 6urw by Molmil
Crystal structure of ricin A chain in complex with inhibitor 4-(2-thienylmethyl)benzoic acid
Descriptor: 1,2-ETHANEDIOL, 4-[(thiophen-2-yl)methyl]benzoic acid, DIMETHYL SULFOXIDE, ...
Authors:Harijan, R.K, Li, X.P, Bonanno, J.B, Almo, S.C, Tumer, N.E, Schramm, V.L.
Deposit date:2019-10-24
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Small Molecule Inhibitors Targeting the Interaction of Ricin Toxin A Subunit with Ribosomes.
Acs Infect Dis., 6, 2020
2JDL
DownloadVisualize
BU of 2jdl by Molmil
Structure of C-terminal region of acidic P2 ribosomal protein complexed with trichosanthin
Descriptor: ACIDIC RIBOSOMAL PROTEIN P2, RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN
Authors:Too, P.H, Mak, A.N, Zhu, G, Au, S.W, Wong, K.B, Shaw, P.C.
Deposit date:2007-01-11
Release date:2008-02-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The C-Terminal Fragment of the Ribosomal P Protein Complexed to Trichosanthin Reveals the Interaction between the Ribosome-Inactivating Protein and the Ribosome.
Nucleic Acids Res., 37, 2009
5GM7
DownloadVisualize
BU of 5gm7 by Molmil
Crystal structure of Ribosome inactivating protein from Momordica balsamina at 1.78 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Ribosome inactivating protein
Authors:Singh, B, Singh, P.K, Pandey, S.N, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-07-13
Release date:2016-07-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of Ribosome inactivating protein from Momordica balsamina at 1.78 Angstrom resolution
To Be Published
5GZ7
DownloadVisualize
BU of 5gz7 by Molmil
Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Tiwari, P, Pandey, S.N, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-09-26
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution.
To Be Published
2JJR
DownloadVisualize
BU of 2jjr by Molmil
V232K, N236D-trichosanthin
Descriptor: DI(HYDROXYETHYL)ETHER, RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN, SULFATE ION, ...
Authors:Too, P.H, Ma, M.K, Mak, A.N, Tung, C.K, Zhu, G, Au, S.W, Wong, K.B, Shaw, P.C.
Deposit date:2008-04-21
Release date:2008-12-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The C-Terminal Fragment of the Ribosomal P Protein Complexed to Trichosanthin Reveals the Interaction between the Ribosome-Inactivating Protein and the Ribosome.
Nucleic Acids Res., 37, 2009
5Z3J
DownloadVisualize
BU of 5z3j by Molmil
Crystal Structure of Abrin A chain (Recombinant) in complex with Nicotinamide at 1.7 Angstroms
Descriptor: Abrin A-chain, IMIDAZOLE, NICOTINAMIDE
Authors:Bansia, H, Karande, A.A, Ramakumar, S.
Deposit date:2018-01-08
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10.
FEBS J., 286, 2019
4Q9F
DownloadVisualize
BU of 4q9f by Molmil
Crystal structure of type 1 ribosome inactivating protein from Momordica balsamina in complex with guanosine mono phosphate at 1.75 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Kushwaha, G.S, Pandey, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-05-01
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of type 1 ribosome inactivating protein from Momordica balsamina in complex with guanosine mono phosphate at 1.75 Angstrom resolution
To be Published
5Z3I
DownloadVisualize
BU of 5z3i by Molmil
Crystal Structure of Abrin A chain (Recombinant) in complex with Adenine at 1.65 Angstroms
Descriptor: ADENINE, Abrin A-chain
Authors:Bansia, H, Karande, A.A, Ramakumar, S.
Deposit date:2018-01-08
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10.
FEBS J., 286, 2019
4RZJ
DownloadVisualize
BU of 4rzj by Molmil
Structure of the complex of type 1 ribosome inactivating protein from Momordica balsamina with N-acetylglucosamine at 1.98 Angstrom resolution using crystals grown in different conditions
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein
Authors:Pandey, S, Kushwaha, G.S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-12-22
Release date:2015-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure of the complex of type 1 ribosome inactivating protein from Momordica balsamina with N-acetylglucosamine at 1.98 Angstrom resolution using crystals grown in different conditions
TO BE PUBLISHED
2K6H
DownloadVisualize
BU of 2k6h by Molmil
NMR structure of an unusually 28 kDa Active Mutant of Maize Ribosome-Inactivating protein (MOD)
Descriptor: Ribosome-inactivating protein
Authors:Yang, Y, Mak, A.N, Shaw, P.C, Sze, K.H.
Deposit date:2008-07-09
Release date:2009-07-14
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of an active mutant of maize ribosome-inactivating protein (MOD) and its interaction with the ribosomal stalk protein P2.
J.Mol.Biol., 395, 2010
2VC3
DownloadVisualize
BU of 2vc3 by Molmil
Ricin A-Chain (Recombinant) E177D Mutant with a bound acetate
Descriptor: ACETATE ION, RICIN A CHAIN, SULFATE ION
Authors:Marsden, C.J, Fulop, V.
Deposit date:2007-09-18
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Isolation and Characterisation of Temperature-Dependent Ricin a Chain Molecules in Saccharomyces Cerevisiae
FEBS J., 274, 2007
2VS6
DownloadVisualize
BU of 2vs6 by Molmil
K173A, R174A, K177A-trichosanthin
Descriptor: RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN
Authors:Too, P.H, Ma, M.K, Mak, A.N, Tung, C.K, Zhu, G, Au, S.W, Wong, K.B, Shaw, P.C, Ng, A.
Deposit date:2008-04-21
Release date:2008-12-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The C-Terminal Fragment of the Ribosomal P Protein Complexed to Trichosanthin Reveals the Interaction between the Ribosome-Inactivating Protein and the Ribosome.
Nucleic Acids Res., 37, 2009
2VC4
DownloadVisualize
BU of 2vc4 by Molmil
Ricin A-Chain (Recombinant) E177D Mutant
Descriptor: GLYCEROL, RICIN A CHAIN, SULFATE ION
Authors:Marsden, C.J, Fulop, V.
Deposit date:2007-09-18
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:The Isolation and Characterisation of Temperature-Dependent Ricin a Chain Molecules in Saccharomyces Cerevisiae
FEBS J., 274, 2007
1AHC
DownloadVisualize
BU of 1ahc by Molmil
THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor: ALPHA-MOMORCHARIN
Authors:Ren, J, Wang, Y, Dong, Y, Stuart, D.I.
Deposit date:1994-01-07
Release date:1994-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin.
Structure, 2, 1994
1AHA
DownloadVisualize
BU of 1aha by Molmil
THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor: ADENINE, ALPHA-MOMORCHARIN
Authors:Ren, J, Wang, Y, Dong, Y, Stuart, D.I.
Deposit date:1994-01-07
Release date:1994-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin.
Structure, 2, 1994
1AHB
DownloadVisualize
BU of 1ahb by Molmil
THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor: ALPHA-MOMORCHARIN, FORMYCIN-5'-MONOPHOSPHATE
Authors:Ren, J, Wang, Y, Dong, Y, Stuart, D.I.
Deposit date:1994-01-07
Release date:1994-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin.
Structure, 2, 1994
6OCD
DownloadVisualize
BU of 6ocd by Molmil
Ricin A chain bound to VHH antibody V6D4
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, IMIDAZOLE, ...
Authors:Rudolph, M.J.
Deposit date:2019-03-22
Release date:2020-04-01
Last modified:2020-10-14
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site.
J.Mol.Biol., 432, 2020

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon