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9FXK
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BU of 9fxk by Molmil
Transcription repressor NrdR from E. coli, AMPPNP/ATP-bound state
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Bimai, O, Logan, D.T.
Deposit date:2024-07-01
Release date:2025-03-19
Last modified:2025-07-02
Method:X-RAY DIFFRACTION (2.331 Å)
Cite:Bacterial transcriptional repressor NrdR - a flexible multifactorial nucleotide sensor.
Febs J., 292, 2025
1MG4
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BU of 1mg4 by Molmil
STRUCTURE OF N-TERMINAL DOUBLECORTIN DOMAIN FROM DCLK: WILD TYPE PROTEIN
Descriptor: DOUBLECORTIN-LIKE KINASE (N-TERMINAL DOMAIN), SULFATE ION
Authors:Kim, M.H, Cierpickil, T, Derewenda, U, Krowarsch, D, Feng, Y, Devedjiev, Y, Dauter, Z, Walsh, C.A, Otlewski, J, Bushweller, J.H, Derewenda, Z.
Deposit date:2002-08-14
Release date:2003-04-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:The DCX-domain Tandems of Doublecortin and Doublecortin-like Kinase
Nat.Struct.Biol., 10, 2003
5F0E
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BU of 5f0e by Molmil
Murine endoplasmic reticulum alpha-glucosidase II
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2015-11-27
Release date:2016-07-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
9GMD
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BU of 9gmd by Molmil
MukEF in complex with the phage protein gp5.9 (focus)
Descriptor: Chromosome partition protein MukE, Chromosome partition protein MukF, Probable RecBCD inhibitor gp5.9
Authors:Burmann, F, Wilkinson, O, Kimanius, D, Dillingham, M, Lowe, J.
Deposit date:2024-08-28
Release date:2025-03-26
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Mechanism of DNA capture by the MukBEF SMC complex and its inhibition by a viral DNA mimic.
Cell, 188, 2025
7RUI
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BU of 7rui by Molmil
Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844
Descriptor: Bromodomain-containing protein 4, N-{1-[1,1-di(pyridin-2-yl)ethyl]-6-(5-{[(2-fluorophenyl)carbamoyl]amino}-1-methyl-6-oxo-1,6-dihydropyridin-3-yl)-1H-indol-4-yl}-2,2,2-trifluoroethane-1-sulfonamide
Authors:Ratia, K.M, Xiong, R, Li, Y, Shen, Z, Zhao, J, Huang, F, Dubrovyskyii, O, Thatcher, G.R.
Deposit date:2021-08-17
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844
To Be Published
1MGQ
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BU of 1mgq by Molmil
CRYSTAL STRUCTURE OF A HEPTAMERIC SM-LIKE PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
Descriptor: SM-LIKE PROTEIN
Authors:Collins, B.M, Naidoo, N, Harrop, S.J, Curmi, P.M.G, Mabbutt, B.C.
Deposit date:2002-08-16
Release date:2002-12-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Refined Structure of Sm-Like Protein Heptamer from Methanobacterium thermoautotrophicum
To be published
2P4W
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BU of 2p4w by Molmil
Crystal structure of heat shock regulator from Pyrococcus furiosus
Descriptor: SULFATE ION, Transcriptional regulatory protein arsR family
Authors:Liu, W, Vierke, G, Panjikar, S, Thomm, M, Ladenstein, R.
Deposit date:2007-03-13
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Archaeal Heat Shock Regulator from Pyrococcus furiosus: A Molecular Chimera Representing Eukaryal and Bacterial Features.
J.Mol.Biol., 369, 2007
9G7D
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BU of 9g7d by Molmil
Crystal structure of ASGPR with bound IMP
Descriptor: Asialoglycoprotein receptor 1, CALCIUM ION, INOSINIC ACID
Authors:Schreuder, H.A, Hofmeister, A.
Deposit date:2024-07-20
Release date:2025-03-19
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.588 Å)
Cite:Trivalent siRNA-Conjugates with Guanosine as ASGPR-Binder Show Potent Knock-Down In Vivo.
J.Med.Chem., 68, 2025
7RV4
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BU of 7rv4 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-9153
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, Isoform 2 of B-cell lymphoma 6 protein, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-08-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure of the BCL6 BTB domain
To Be Published
1M8R
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BU of 1m8r by Molmil
Crystal Structures of Cadmium-binding Acidic Phospholipase A2 from the Venom of Agkistrodon halys pallas at 1.9 Resolution (crystal grown at pH 7.4)
Descriptor: 1,4-BUTANEDIOL, CADMIUM ION, phospholipase A2
Authors:Xu, S, Gu, L, Zhou, Y, Lin, Z.
Deposit date:2002-07-25
Release date:2003-02-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of cadmium-binding acidic phospholipase A(2) from the venom of Agkistrodon halys Pallas at 1.9A resolutio
Biochem.Biophys.Res.Commun., 300, 2003
9GB3
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BU of 9gb3 by Molmil
Extended phiCD508 portal
Descriptor: gp45 - Portal protein
Authors:Wilson, J.S, Fagan, R.P, Bullough, P.A.
Deposit date:2024-07-29
Release date:2025-03-26
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Molecular mechanism of bacteriophage contraction structure of an S-layer-penetrating bacteriophage.
Life Sci Alliance, 8, 2025
1M9C
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BU of 1m9c by Molmil
X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type Complex.
Descriptor: Cyclophilin A, HIV-1 Capsid
Authors:Howard, B.R, Vajdos, F.F, Li, S, Sundquist, W.I, Hill, C.P.
Deposit date:2002-07-28
Release date:2003-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the catalytic mechanism of cyclophilin A
Nat.Struct.Biol., 10, 2003
7RVK
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BU of 7rvk by Molmil
Segment from Y169G mutant of the human prion protein 169-175 GSNQNNF
Descriptor: ACETATE ION, Major prion protein, ZINC ION
Authors:Glynn, C, Rodriguez, J.A, Hernandez, E.
Deposit date:2021-08-18
Release date:2022-08-24
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (1 Å)
Cite:Structural and Biophysical Consequences of Sequence Variation in the B2a2 Loop of Mammalian Prions
To be published
7RWQ
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BU of 7rwq by Molmil
Crystal Structure of BPTF bromodomain in complex with 4-chloro-2-methyl-5-[(1,2,3,4-tetrahydroisoquinolin-6-yl)amino]pyridazin-3(2H)-one
Descriptor: 4-chloro-2-methyl-5-[(1,2,3,4-tetrahydroisoquinolin-6-yl)amino]pyridazin-3(2H)-one, CALCIUM ION, Nucleosome-remodeling factor subunit BPTF
Authors:Zahid, H, Buchholz, C, Johnson, J.A, Shi, K, Aihara, H, Pomerantz, W.C.K.
Deposit date:2021-08-20
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition.
J.Med.Chem., 64, 2021
9GM6
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BU of 9gm6 by Molmil
MukBEF in a nucleotide-bound state with open neck gate (heads core)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Acyl carrier protein, Chromosome partition protein MukB, ...
Authors:Burmann, F, Lowe, J.
Deposit date:2024-08-28
Release date:2025-03-26
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Mechanism of DNA capture by the MukBEF SMC complex and its inhibition by a viral DNA mimic.
Cell, 188, 2025
9GB8
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BU of 9gb8 by Molmil
Contracted phiCD508 tail
Descriptor: Phage tail sheath protein
Authors:Wilson, J.S, Fagan, R.P, Bullough, P.A.
Deposit date:2024-07-29
Release date:2025-04-09
Method:ELECTRON MICROSCOPY (4.11 Å)
Cite:Molecular mechanism of bacteriophage contraction structure of an S-layer-penetrating bacteriophage.
Life Sci Alliance, 8, 2025
1MH3
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BU of 1mh3 by Molmil
maltose binding-a1 homeodomain protein chimera, crystal form I
Descriptor: maltose binding-a1 homeodomain protein chimera
Authors:Ke, A, Wolberger, C.
Deposit date:2002-08-19
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights into binding cooperativity of MATa1/MATalpha2 from the crystal structure of a MATa1 homeodomain-maltose binding protein chimera
Protein Sci., 12, 2003
7RVC
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BU of 7rvc by Molmil
Segment from the human prion protein 168-176 EYSNQNNFV
Descriptor: Major prion protein
Authors:Glynn, C, Rodriguez, J.A, Hernandez, E.
Deposit date:2021-08-18
Release date:2022-08-24
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (1.002 Å)
Cite:Structural and Biophysical Consequences of Sequence Variation in the B2a2 Loop of Mammalian Prions
To be published
7RWF
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BU of 7rwf by Molmil
Crystal structure of CDK2 in complex with TW8672
Descriptor: 1,2-ETHANEDIOL, 2-{[2-(1H-indol-3-yl)ethyl]amino}-5-nitrobenzoic acid, Cyclin-dependent kinase 2
Authors:Sun, L, Schonbrunn, E.
Deposit date:2021-08-19
Release date:2022-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Development of allosteric and selective CDK2 inhibitors for contraception with negative cooperativity to cyclin binding.
Nat Commun, 14, 2023
9G0W
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BU of 9g0w by Molmil
auxin transporter PIN8 as asymmetric dimer (inward/outward) with 2,4-D bound in the inward vestibule prebinding state
Descriptor: (2,4-DICHLOROPHENOXY)ACETIC ACID, 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Auxin efflux carrier component 8, ...
Authors:Ung, K.L, Stokes, D.L, Pedersen, B.P.
Deposit date:2024-07-09
Release date:2025-04-09
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Transport of herbicides by PIN-FORMED auxin transporters.
Biorxiv, 2024
9G10
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BU of 9g10 by Molmil
auxin transporter PIN8 as asymmetric dimer (outward/inward) with 4-CPA bound in the outward partly released state
Descriptor: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-(4-chloranylphenoxy)ethanoic acid, Auxin efflux carrier component 8, ...
Authors:Ung, K.L, Stokes, D.L, Pedersen, B.P.
Deposit date:2024-07-09
Release date:2025-04-09
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Transport of herbicides by PIN-FORMED auxin transporters.
Biorxiv, 2024
1MHX
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BU of 1mhx by Molmil
Crystal Structures of the redesigned protein G variant NuG1
Descriptor: immunoglobulin-binding protein G
Authors:Nauli, S, Kuhlman, B, Le Trong, I, Stenkamp, R.E, Teller, D.C, Baker, D.
Deposit date:2002-08-21
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures and increased stabilization of the protein G variants with switched folding pathways NuG1 and NuG2
Protein Sci., 11, 2002
5F1C
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BU of 5f1c by Molmil
Crystal structure of an invertebrate P2X receptor from the Gulf Coast tick in the presence of ATP and Zn2+ ion at 2.9 Angstroms
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Putative uncharacterized protein, ...
Authors:Kasuya, G, Hattori, M, Ishitani, R, Nureki, O.
Deposit date:2015-11-30
Release date:2016-03-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Insights into Divalent Cation Modulations of ATP-Gated P2X Receptor Channels
Cell Rep, 14, 2016
7RV7
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BU of 7rv7 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-9322
Descriptor: CALCIUM ION, GLYCEROL, Isoform 2 of B-cell lymphoma 6 protein, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-08-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structure of the BCL6 BTB domain
To Be Published
1MA7
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BU of 1ma7 by Molmil
Crystal structure of Cre site-specific recombinase complexed with a mutant DNA substrate, LoxP-A8/T27
Descriptor: CRE RECOMBINASE, LOXP
Authors:Martin, S.S, Chu, V.C, Baldwin, E.P.
Deposit date:2002-08-01
Release date:2003-07-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Modulation of the active complex assembly and turnover rate by protein-DNA interactions in Cre-LoxP recombination
Biochemistry, 42, 2003

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