PDB: 216602 resultsInfo pagesStatus searchChemie searchBIRD

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4Z8X	Truncated FtsH from A. aeolicus Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH, SULFATE ION, ... Authors: Vostrukhina, M, Baumann, U, Schacherl, M, Bieniossek, C, Lanz, M, Baumgartner, R. Deposit date: 2015-04-09 Release date: 2015-05-06 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (3.25 Å) Cite: The structure of Aquifex aeolicus FtsH in the ADP-bound state reveals a C2-symmetric hexamer. Acta Crystallogr.,Sect.D, 71, 2015
3V1L	Crystal Structure of the S112A/H265Q mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400 Descriptor: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONIC ACID Authors: Ghosh, S, Bolin, J.T. Deposit date: 2011-12-09 Release date: 2012-03-21 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.11 Å) Cite: Identification of an Acyl-Enzyme Intermediate in a meta-Cleavage Product Hydrolase Reveals the Versatility of the Catalytic Triad. J.Am.Chem.Soc., 134, 2012
6QU4	Crystal Structure of Phosphofructokinase from Trypanosoma brucei in complex with an allosteric inhibitor ctcb405 Descriptor: 1-[(3,4-dichlorophenyl)methyl]-5-[2-(dimethylamino)ethyl]pyrrolo[3,2-c]pyridin-4-one, ATP-dependent 6-phosphofructokinase, CITRIC ACID, ... Authors: McNae, I.W, Dornan, J, Walkinshaw, M.D. Deposit date: 2019-02-26 Release date: 2020-03-18 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Fast acting allosteric phosphofructokinase inhibitors block trypanosome glycolysis and cure acute African trypanosomiasis in mice. Nat Commun, 12, 2021
4OF7	Crystal Structure of SYG-1 D1, Crystal Form 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Protein SYG-1, isoform b, ... Authors: Ozkan, E, Garcia, K.C. Deposit date: 2014-01-14 Release date: 2014-02-19 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis. Cell(Cambridge,Mass.), 156, 2014
6WRB	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J5 immobile Holliday junction Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*CP*GP*AP*CP*GP*GP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*C)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-04-29 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.15 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WR5	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J35 immobile Holliday junction Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*AP*TP*GP*AP*CP*GP*AP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*C)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-04-29 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.063 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WRI	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J28 immobile Holliday junction Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*AP*TP*GP*AP*CP*TP*CP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*G)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-04-29 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.057 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WR7	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J33 immobile Holliday junction Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*TP*TP*GP*AP*CP*AP*GP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*C)-3'), DNA (5'-D(P*AP*GP*TP*CP*TP*GP*C)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-04-29 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.11 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WSU	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J19 immobile Holliday junction Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*GP*AP*GP*AP*CP*TP*CP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*G)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-05-01 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.756 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WT0	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J25 immobile Holliday junction Descriptor: COBALT (II) ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*GP*AP*GP*AP*CP*CP*GP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*C)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-05-01 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.106 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WT1	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J29 immobile Holliday junction Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*AP*AP*GP*AP*CP*TP*GP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*C)-3'), DNA (5'-D(P*AP*GP*TP*CP*T)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-05-01 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.11 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WSV	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J20 immobile Holliday junction Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*GP*TP*GP*AP*CP*AP*GP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*C)-3'), DNA (5'-D(P*CP*GP*TP*CP*TP*GP*C)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-05-01 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.101 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WSS	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J15 immobile Holliday junction Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*GP*TP*GP*AP*CP*CP*GP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*C)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-05-01 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.001 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WSP	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J9 immobile Holliday junction Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*GP*TP*GP*AP*CP*TP*GP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*C)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-05-01 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.049 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WSR	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J10 immobile Holliday junction Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*GP*AP*GP*AP*CP*CP*CP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*G)-3'), DNA (5'-D(P*CP*GP*TP*CP*TP*GP*C)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-05-01 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.85 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
6WSZ	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J24 immobile Holliday junction Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*AP*GP*AP*CP*TP*CP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*G)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-05-01 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.053 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
1MK0	catalytic domain of intron endonuclease I-TevI, E75A mutant Descriptor: BETA-MERCAPTOETHANOL, CITRIC ACID, Intron-associated endonuclease 1 Authors: Van Roey, P, Meehan, L, Kowalski, J.C, Belfort, M, Derbyshire, V. Deposit date: 2002-08-28 Release date: 2002-10-30 Last modified: 2021-10-27 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease I-TevI. Nat.Struct.Biol., 9, 2002
6WSW	Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J21 immobile Holliday junction Descriptor: CACODYLATE ION, DNA (5'-D(*AP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*TP*GP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*C)-3'), ... Authors: Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. Deposit date: 2020-05-01 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.12 Å) Cite: The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
8K9F	Cryo-EM structure of the photosynthetic alternative complex III from Chloroflexus aurantiacus at 2.9 angstrom Descriptor: 1,3-bis(13-methyltetradecanoyloxy)propan-2-yl pentadecanoate, Cytochrome c domain-containing protein, Cytochrome c7-like domain-containing protein, ... Authors: Xu, X. Deposit date: 2023-08-01 Release date: 2024-03-06 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM structure of HQNO-bound Alternative Complex III from the anoxygenic phototrophic bacterium Chloroflexus aurantiacus. Plant Cell, 2024
1LWV	Borohydride-trapped hOgg1 Intermediate Structure Co-Crystallized with 8-aminoguanine Descriptor: 5'-D(*GP*CP*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 8-AMINOGUANINE, ... Authors: Fromme, J.C, Bruner, S.D, Yang, W, Karplus, M, Verdine, G.L. Deposit date: 2002-06-03 Release date: 2003-02-25 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Product-Assisted Catalysis in Base Excision DNA Repair Nat.Struct.Biol., 10, 2003
3UM2	Crystal structure of the Brox Bro1 domain in complex with the C-terminal tail of CHMP5 Descriptor: BRO1 domain-containing protein BROX, Charged multivesicular body protein 5, GLYCEROL Authors: Jiang, J.S, Mu, R.L, Xiao, T. Deposit date: 2011-11-12 Release date: 2012-04-18 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.589 Å) Cite: Two Distinct Binding Modes Define the Interaction of Brox with the C-Terminal Tails of CHMP5 and CHMP4B. Structure, 20, 2012
3C3O	ALIX Bro1-domain:CHMIP4A co-crystal structure Descriptor: Charged multivesicular body protein 4a peptide, GLYCEROL, Programmed cell death 6-interacting protein Authors: McCullough, J.B, Fisher, R.D, Whitby, F.G, Sundquist, W.I, Hill, C.P. Deposit date: 2008-01-28 Release date: 2008-06-10 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.15 Å) Cite: ALIX-CHMP4 interactions in the human ESCRT pathway. Proc.Natl.Acad.Sci.Usa, 105, 2008
4YON	P-Rex1:Rac1 complex Descriptor: Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein, Ras-related C3 botulinum toxin substrate 1 Authors: Lucato, C.M, Whisstock, J.C, Ellisdon, A.M. Deposit date: 2015-03-11 Release date: 2015-07-01 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.95 Å) Cite: The Phosphatidylinositol (3,4,5)-Trisphosphate-dependent Rac Exchanger 1Ras-related C3 Botulinum Toxin Substrate 1 (P-Rex1Rac1) Complex Reveals the Basis of Rac1 Activation in Breast Cancer Cells. J.Biol.Chem., 290, 2015
4FLG	HIV-1 protease mutant I47V complexed with reaction intermediate Descriptor: CHLORIDE ION, GLUTAMIC ACID, GLYCEROL, ... Authors: Yu, X, Shen, C.H, Weber, I.T. Deposit date: 2012-06-14 Release date: 2012-10-17 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.31 Å) Cite: Capturing the Reaction Pathway in Near-Atomic-Resolution Crystal Structures of HIV-1 Protease. Biochemistry, 51, 2012
3BNF	W. succinogenes NrfA Sulfite Complex Descriptor: ACETATE ION, CALCIUM ION, Cytochrome c-552, ... Authors: Lukat, P, Einsle, O. Deposit date: 2007-12-14 Release date: 2008-02-26 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Binding and Reduction of Sulfite by Cytochrome c Nitrite Reductase Biochemistry, 47, 2008

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