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5LKV
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BU of 5lkv by Molmil
Dehaloperoxidase B from Amphitrite ornata: imidazole complex
Descriptor: Dehaloperoxidase B, GLYCEROL, IMIDAZOLE, ...
Authors:Chicano, T.M, Dworkowski, F.S.N, Hough, M.A.
Deposit date:2016-07-25
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Dehaloperoxidase B from Amphitrite ornata: imidazole complex
to be published
5WJN
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BU of 5wjn by Molmil
Crystal Structure of HLA-A*11:01-GTS3
Descriptor: Beta-2-microglobulin, GTS3 peptide, HLA class I histocompatibility antigen, ...
Authors:Gras, S, Rossjohn, J.
Deposit date:2017-07-23
Release date:2017-09-20
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Germline bias dictates cross-serotype reactivity in a common dengue-virus-specific CD8(+) T cell response.
Nat. Immunol., 18, 2017
8DI7
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BU of 8di7 by Molmil
CMY-2
Descriptor: Beta-lactamase, SULFATE ION
Authors:Ahmadvand, P, Call, D.R.
Deposit date:2022-06-28
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural characterization of CMY-2 and its interactions with ampicillin and the cephalosporins - ceftiofur, DFC, DFC-dimer, DFC-cysteine, and nitrocefin
To Be Published
6TOJ
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BU of 6toj by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 17a
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[[1-methyl-3-(3-methyl-3-oxidanyl-butyl)-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile, B-cell lymphoma 6 protein
Authors:Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TOQ
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BU of 6toq by Molmil
Crystal structure of a PP2A B56y/HTLV-1 integrase complex
Descriptor: Pol protein, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform
Authors:Minnell, J.J, Barski, M.S, Maertens, G.N.
Deposit date:2019-12-11
Release date:2020-10-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.164 Å)
Cite:Cryo-EM structure of the deltaretroviral intasome in complex with the PP2A regulatory subunit B56 gamma.
Nat Commun, 11, 2020
8D5V
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BU of 8d5v by Molmil
WhiB6 bound to the SigmaAr4-RNAP Beta flap tip chimera
Descriptor: IRON/SULFUR CLUSTER, Probable transcriptional regulator WhiB6, RNA polymerase sigma factor SigA,DNA-directed RNA polymerase subunit beta
Authors:Wan, T, Zhang, L.M.
Deposit date:2022-06-06
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of WhiB6 and SigA4-betaTip complex
To Be Published
5M27
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BU of 5m27 by Molmil
Structure of a bacterial light-regulated adenylyl cylcase
Descriptor: Beta subunit of photoactivated adenylyl cyclase, CALCIUM ION, CHLORIDE ION, ...
Authors:Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
Deposit date:2016-10-12
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
6TQL
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BU of 6tql by Molmil
Cryo-EM of elastase-treated human uromodulin (UMOD)/Tamm-Horsfall protein (THP) filament
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Stsiapanava, A, Xu, C, Carroni, M, Wu, B, Jovine, L.
Deposit date:2019-12-16
Release date:2020-11-04
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Cryo-EM structure of native human uromodulin, a zona pellucida module polymer.
Embo J., 39, 2020
6J38
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BU of 6j38 by Molmil
Crystal structure of CmiS2
Descriptor: FAD-dependent glycine oxydase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kawasaki, D, Chisuga, T, Miyanaga, A, Kudo, F, Eguchi, T.
Deposit date:2019-01-04
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Analysis of the Glycine Oxidase Homologue CmiS2 Reveals a Unique Substrate Recognition Mechanism for Formation of a beta-Amino Acid Starter Unit in Cremimycin Biosynthesis.
Biochemistry, 58, 2019
5NMM
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BU of 5nmm by Molmil
The structure of the polo-box domain (PBD) of Plk1 in complex with Alpha-Bromo-3-Iodotoluene.
Descriptor: Alpha-Bromo-3-Iodotoluene, Serine/threonine-protein kinase PLK1
Authors:Kunciw, D.L, Rossmann, M, Stokes, J.E, De Fusco, C, Spring, D.R, Hyvonen, M.
Deposit date:2017-04-06
Release date:2018-02-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:A cryptic hydrophobic pocket in the polo-box domain of the polo-like kinase PLK1 regulates substrate recognition and mitotic chromosome segregation.
Sci Rep, 9, 2019
6TF8
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BU of 6tf8 by Molmil
Structure of the engineered artificial aldolase I133F RA95.5-8F with a bound substrate, pentan-2-one
Descriptor: RA95.5-8F_133F
Authors:Mori, T, Macdonald, D.S.
Deposit date:2019-11-13
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Engineered Artificial Carboligases Facilitate Regioselective Preparation of Enantioenriched Aldol Adducts.
J.Am.Chem.Soc., 142, 2020
6J8H
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BU of 6j8h by Molmil
Structure of human voltage-gated sodium channel Nav1.7 in complex with auxiliary beta subunits, huwentoxin-IV and saxitoxin (Y1755 down)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sodium channel protein type 9 subunit alpha, ...
Authors:Shen, H, Liu, D, Lei, J, Yan, N.
Deposit date:2019-01-19
Release date:2019-02-27
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of human Nav1.7 channel in complex with auxiliary subunits and animal toxins.
Science, 363, 2019
5W7Q
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BU of 5w7q by Molmil
Crystal Structure of Reconstructed Bacterial Elongation Factor Node 168
Descriptor: Consensus Elongation Factor, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Ortlund, E.A.
Deposit date:2017-06-20
Release date:2018-04-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Dynamics Comparison of Thermostability in Ancient, Modern, and Consensus Elongation Factor Tus.
Structure, 26, 2018
7X4O
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BU of 7x4o by Molmil
Crystal structure of Vps17p PX from S. cerevisiae (Space)
Descriptor: SULFATE ION, Vacuolar protein sorting-associated protein 17
Authors:Maita, N, Kohda, D, Obita, T.
Deposit date:2022-03-03
Release date:2022-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of the PX domain of Vps17p from Saccharomyces cerevisiae.
Acta Crystallogr.,Sect.F, 78, 2022
6T37
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BU of 6t37 by Molmil
Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Glucose-1-phosphate thymidylyltransferase, ...
Authors:Alphey, M.S, Xiao, G, Westwood, J.N.
Deposit date:2019-10-10
Release date:2020-08-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.079 Å)
Cite:Next generation Glucose-1-phosphate thymidylyltransferase (RmlA) inhibitors: An extended SAR study to direct future design.
Bioorg.Med.Chem., 50, 2021
5N93
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BU of 5n93 by Molmil
TTK kinase domain in complex with TC-Mps1-12
Descriptor: 4-[[4-azanyl-6-(~{tert}-butylamino)-5-cyano-pyridin-2-yl]amino]benzamide, Dual specificity protein kinase TTK
Authors:Uitdehaag, J, Willemsen-Seegers, N, de Man, J, Buijsman, R.C, Zaman, G.J.R.
Deposit date:2017-02-24
Release date:2017-05-31
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity.
J. Mol. Biol., 429, 2017
7KIP
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BU of 7kip by Molmil
A 3.4 Angstrom cryo-EM structure of the human coronavirus spike trimer computationally derived from vitrified NL63 virus particles
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Zhang, K, Li, S, Pintilie, G, Chmielewski, D, Schmid, M, Simmons, G, Jin, J, Chiu, W.
Deposit date:2020-10-24
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:A 3.4- angstrom cryo-EM structure of the human coronavirus spike trimer computationally derived from vitrified NL63 virus particles.
Biorxiv, 2020
5LT1
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BU of 5lt1 by Molmil
nucleotide-free kinesin-1 motor domain T92V mutant, P21 crystal form
Descriptor: ACETATE ION, Kinesin-like protein, STRONTIUM ION, ...
Authors:Cao, L, Gigant, B.
Deposit date:2016-09-06
Release date:2017-03-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:The structural switch of nucleotide-free kinesin.
Sci Rep, 7, 2017
5LRM
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BU of 5lrm by Molmil
Structure of di-zinc MCR-1 in P41212 space group
Descriptor: GLYCEROL, ZINC ION, phosphatidylethanolamine transferase Mcr-1
Authors:Hinchliffe, P, Spencer, J.
Deposit date:2016-08-19
Release date:2016-12-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into the Mechanistic Basis of Plasmid-Mediated Colistin Resistance from Crystal Structures of the Catalytic Domain of MCR-1.
Sci Rep, 7, 2017
7KQO
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BU of 7kqo by Molmil
Crystal structure of SARS-CoV-2 NSP3 macrodomain (P43 crystal form)
Descriptor: Non-structural protein 3
Authors:Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S.
Deposit date:2020-11-17
Release date:2020-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
5X30
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BU of 5x30 by Molmil
Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant with L-homocysteine intermediates.
Descriptor: (2E)-2-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}but-2-enoic acid, (2~{S})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-4-sulfanyl-butanoic acid, 2-AMINO-4-MERCAPTO-BUTYRIC ACID, ...
Authors:Shiba, T, Sato, D, Harada, S.
Deposit date:2017-02-02
Release date:2017-04-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
6J39
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BU of 6j39 by Molmil
Crystal structure of CmiS2 with inhibitor
Descriptor: (3R)-3-[(carboxymethyl)sulfanyl]nonanoic acid, FAD-dependent glycine oxydase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kawasaki, D, Chisuga, T, Miyanaga, A, Kudo, F, Eguchi, T.
Deposit date:2019-01-04
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Analysis of the Glycine Oxidase Homologue CmiS2 Reveals a Unique Substrate Recognition Mechanism for Formation of a beta-Amino Acid Starter Unit in Cremimycin Biosynthesis.
Biochemistry, 58, 2019
5LTX
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BU of 5ltx by Molmil
LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECEPTOR PCTA IN COMPLEX WITH L-MET
Descriptor: ACETATE ION, Chemotaxis protein, FORMIC ACID, ...
Authors:Gavira, J.A, Rico-Gimenez, M, Ortega, A, Conejero-Muriel, M, Zhulin, I, Krell, T.
Deposit date:2016-09-07
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
Mbio, 2020
5M0A
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BU of 5m0a by Molmil
Solution structure of isolated 15th Fibronectin III domain from human fibronectin
Descriptor: Fibronectin
Authors:Waltho, J.P, Cliff, M.J, Blumson, E, Humphries, M.
Deposit date:2016-10-04
Release date:2017-11-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of isolated 15th Fibronectin III domain from human fibronectin
To Be Published
5LWY
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BU of 5lwy by Molmil
Revised crystal structure of the human adiponectin receptor 2 in complex with a C18 free fatty acid
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Adiponectin receptor protein 2, GLYCEROL, ...
Authors:Leyrat, C, Vasiliauskaite-Brooks, I, Granier, S.
Deposit date:2016-09-19
Release date:2017-03-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into adiponectin receptors suggest ceramidase activity.
Nature, 6, 2017

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