PDB: 5515 resultsInfo pagesStatus searchChemie searchBIRD

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8TNO	UNC_239 from Chroma generative model Descriptor: UNC_239 Authors: Ng-Thow-Hing, C, Van Vlack, E.R, Lord, D.M. Deposit date: 2023-08-02 Release date: 2023-11-22 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.36 Å) Cite: Illuminating protein space with a programmable generative model. Nature, 623, 2023
8TNM	UNC_079 from Chroma generative model Descriptor: UNC_079 Authors: Ng-Thow-Hing, C, Van Vlack, E.R, Lord, D.M. Deposit date: 2023-08-02 Release date: 2023-11-22 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.1 Å) Cite: Illuminating protein space with a programmable generative model. Nature, 623, 2023
4O5T	Crystal structure of Diels-Alderase CE20 in complex with a product analog Descriptor: 4-{[2-(phosphonooxy)ethyl]carbamoyl}benzyl [(1R,6S)-6-(dimethylcarbamoyl)cyclohex-2-en-1-yl]carbamate, Diisopropyl-fluorophosphatase Authors: Beck, T, Preiswerk, N, Mayer, C, Hilvert, D. Deposit date: 2013-12-20 Release date: 2014-06-04 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Impact of scaffold rigidity on the design and evolution of an artificial Diels-Alderase. Proc.Natl.Acad.Sci.USA, 111, 2014
4O60	Structure of ankyrin repeat protein Descriptor: ANK-N5C-317 Authors: Ethayathulla, A.S, Guan, L. Deposit date: 2013-12-20 Release date: 2015-03-25 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.52 Å) Cite: A transcription blocker isolated from a designed repeat protein combinatorial library by in vivo functional screen. Sci Rep, 5, 2015
4O5S	Crystal structure of Diels-Alderase CE11 Descriptor: Diisopropyl-fluorophosphatase Authors: Beck, T, Preiswerk, N, Mayer, C, Hilvert, D. Deposit date: 2013-12-20 Release date: 2014-06-04 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Impact of scaffold rigidity on the design and evolution of an artificial Diels-Alderase. Proc.Natl.Acad.Sci.USA, 111, 2014
6TJE	Crystal structure of the computationally designed Cake5 protein Descriptor: Cake5 Authors: Mylemans, B, Laier, I, Noguchi, H, Voet, A.R.D. Deposit date: 2019-11-26 Release date: 2020-05-06 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
3QHT	Crystal Structure of the Monobody ySMB-1 bound to yeast SUMO Descriptor: GLYCEROL, Monobody ySMB-1, Ubiquitin-like protein SMT3 Authors: Koide, S, Gilbreth, R.N. Deposit date: 2011-01-26 Release date: 2011-05-11 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Isoform-specific monobody inhibitors of small ubiquitin-related modifiers engineered using structure-guided library design. Proc.Natl.Acad.Sci.USA, 108, 2011
6TJH	Crystal structure of the computationally designed Cake9 protein Descriptor: Cake9, GLYCEROL, SULFATE ION Authors: Mylemans, B, Laier, I, Noguchi, H, Voet, A.R.D. Deposit date: 2019-11-26 Release date: 2020-05-06 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.43 Å) Cite: Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
6TJC	Crystal structure of the computationally designed Cake3 protein Descriptor: Cake3, GLYCEROL, PHOSPHATE ION Authors: Laier, I, Mylemans, B, Voet, A.R.D, Noguchi, H. Deposit date: 2019-11-26 Release date: 2020-05-06 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
6TJG	Crystal structure of the computationally designed Cake8 protein Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cake8 Authors: Laier, I, Mylemans, B, Noguchi, H, Voet, A.R.D. Deposit date: 2019-11-26 Release date: 2020-05-06 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
8SJH	Zn-Bound Structure of Computationally Designed Homotrimer TP1 Descriptor: CALCIUM ION, CHLORIDE ION, Topoisomerase 1, ... Authors: Hoffnagle, A.M, Tezcan, F.A. Deposit date: 2023-04-18 Release date: 2023-07-05 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries. J.Am.Chem.Soc., 145, 2023
8SJF	Apo Structure of Computationally Designed Homotrimer Tet4 Descriptor: Tet4 Authors: Hoffnagle, A.H, Tezcan, F.A. Deposit date: 2023-04-18 Release date: 2023-07-05 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries. J.Am.Chem.Soc., 145, 2023
8SJG	Zn-Bound Structure of Computationally Designed Homotrimer Tet4 Descriptor: Tet4, ZINC ION Authors: Hoffnagle, A.M, Tezcan, F.A. Deposit date: 2023-04-18 Release date: 2023-07-05 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.39 Å) Cite: Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries. J.Am.Chem.Soc., 145, 2023
8SJI	Apo Structure of Computationally Designed Homotrimer TP1 Descriptor: CALCIUM ION, CHLORIDE ION, Topoisomerase 1 Authors: Hoffnagle, A.M, Tezcan, F.A. Deposit date: 2023-04-18 Release date: 2023-07-05 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries. J.Am.Chem.Soc., 145, 2023
4NW9	Crystal structure of macrocycles containing Abeta17-23 (LVF(MEA)AED) and Abeta30-36 (AIIGL(ORN)V) Descriptor: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LVF(MEA)AED(ORN)AIIGL(ORN)V, SODIUM ION Authors: Spencer, R.K, Li, H, Nowick, J.S. Deposit date: 2013-12-05 Release date: 2014-04-02 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.66 Å) Cite: X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36). J.Am.Chem.Soc., 136, 2014
6V58	Coiled-coil Trimer with Glu:Norleucine:Lys Triad Descriptor: Coiled-coil Trimer with Glu:Norleucine:Lys Triad Authors: Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. Deposit date: 2019-12-03 Release date: 2020-04-29 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.201 Å) Cite: Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6V5G	Coiled-coil Trimer with Ala:Leu:Lys Triad Descriptor: Coiled-coil Trimer with Ala:Leu:Lys Triad, PENTAETHYLENE GLYCOL Authors: Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. Deposit date: 2019-12-04 Release date: 2020-04-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.68 Å) Cite: Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
4P4V	Hexamer formed by a macrocyclic peptide derived from beta-2-microglobulin (63-69) - (ORN)YLL(PHI)YTE(ORN)KVA(MAA)AVK Descriptor: CHLORIDE ION, CYCLIC HEXADECAPEPTIDE (ORN)YLL(PHI)YTE(ORN)KVA(MAA)AVK, SULFATE ION Authors: Spencer, R.K, Nowick, J.S. Deposit date: 2014-03-13 Release date: 2015-05-06 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.97 Å) Cite: X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin. J.Am.Chem.Soc., 137, 2015
4P4Z	Octomer formed by a macrocyclic peptide derived from beta-2-microglobulin (63-69) - (ORN)YLL(PHI)YTE(ORN)KVT(MVA)TVK Descriptor: CYCLIC HEXADECAPEPTIDE (ORN)YLL(PHI)YTE(ORN)KVT(MVA)TVK, PHOSPHATE ION, SODIUM ION Authors: Spencer, R.K, Nowick, J.S. Deposit date: 2014-03-13 Release date: 2015-05-06 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.31 Å) Cite: X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin. J.Am.Chem.Soc., 137, 2015
6V57	Coiled-coil Trimer with Glu:Norvaline:Lys Triad Descriptor: Coiled-coil Trimer with Glu:Norvaline:Lys Triad Authors: Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. Deposit date: 2019-12-03 Release date: 2020-04-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.696 Å) Cite: Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6V5I	Coiled-coil Trimer with Ala:Leu:Ala Triad Descriptor: Coiled-coil Trimer with Ala:Leu:Ala Triad, PENTAETHYLENE GLYCOL Authors: Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. Deposit date: 2019-12-04 Release date: 2020-04-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6V5J	Coiled-coil Trimer with Glu:Leu:Ala Triad Descriptor: Coiled-coil Trimer with Glu:Leu:Ala Triad Authors: Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. Deposit date: 2019-12-04 Release date: 2020-04-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
4QFV	Crystal structure of a unique ankyrin Descriptor: ACETATE ION, ANK-N5C-281 Authors: Ethayathulla, A.S, Tikhonova, E.B, Guan, L. Deposit date: 2014-05-21 Release date: 2015-05-06 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.999 Å) Cite: A transcription blocker isolated from a designed repeat protein combinatorial library by in vivo functional screen. Sci Rep, 5, 2015
6TJD	Crystal structure of the computationally designed Cake4 protein Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cake4 Authors: Laier, I, Mylemans, B, Noguchi, H, Voet, A.R.D. Deposit date: 2019-11-26 Release date: 2020-05-06 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
4PJR	Crystal structure of designed cPPR-NRE protein Descriptor: MAGNESIUM ION, Pentatricopeptide repeat protein Authors: Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O. Deposit date: 2014-05-12 Release date: 2014-12-24 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2 Å) Cite: An artificial PPR scaffold for programmable RNA recognition. Nat Commun, 5, 2014

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