Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8R41
DownloadVisualize
BU of 8r41 by Molmil
Structure of CHI3L1 in complex with inhibitor 1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BROMIDE ION, ...
Authors:Nowak, E, Napiorkowska-Gromadzka, A, Nowotny, M.
Deposit date:2023-11-10
Release date:2024-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1.
J.Med.Chem., 67, 2024
8R42
DownloadVisualize
BU of 8r42 by Molmil
Structure of CHI3L1 in complex with inhibititor 2
Descriptor: 1,2-ETHANEDIOL, 2-[4-[(2~{R})-2-[(4-chlorophenyl)methyl]pyrrolidin-1-yl]piperidin-1-yl]pyridine, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nowak, E, Napiorkowska-Gromadzka, A, Nowotny, M.
Deposit date:2023-11-10
Release date:2024-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1.
J.Med.Chem., 67, 2024
8W01
DownloadVisualize
BU of 8w01 by Molmil
Crystal structure of DUF1735 domain-containing protein (GH18-like) from Bacteroides faecium at 2.7 A resolution (Space group C2)
Descriptor: DUF1735 domain-containing protein
Authors:Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J.
Deposit date:2024-02-13
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8W04
DownloadVisualize
BU of 8w04 by Molmil
Crystal structure of DUF1735-domain containing protein (GH18-like) from Bacteroides faecium at 2.9 A resolution (Space group P21)
Descriptor: DUF1735 domain-containing protein
Authors:Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J.
Deposit date:2024-02-13
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8U48
DownloadVisualize
BU of 8u48 by Molmil
Crystal structure of Bacteroides thetaiotamicron BT1285 D161A-E163A inactive Endoglycosidase in complex with high-mannose N-glycan (Man9GlcNAc2) substrate
Descriptor: Endo-beta-N-acetylglucosaminidase, PHOSPHATE ION, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Sastre, D.E, Sultana, N, Navarro, M.V.A.S, Sundberg, E.J.
Deposit date:2023-09-09
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8U47
DownloadVisualize
BU of 8u47 by Molmil
Crystal structure of Bacteroides thetaiotaomicron VPI-5482 Endoglycosidase BT1285
Descriptor: Endo-beta-N-acetylglucosaminidase, MAGNESIUM ION, PHOSPHATE ION
Authors:Sastre, D.E, Sultana, N, Sundberg, E.J.
Deposit date:2023-09-09
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8U9F
DownloadVisualize
BU of 8u9f by Molmil
Crystal structure of Bacteroides thetaiotamicron BT1285 in complex with NaI
Descriptor: 1,2-ETHANEDIOL, Endo-beta-N-acetylglucosaminidase, IODIDE ION, ...
Authors:Sastre, D.E, Navarro, M.V.A.S, Sundberg, E.J.
Deposit date:2023-09-19
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8U46
DownloadVisualize
BU of 8u46 by Molmil
Crystal structure of Bacteroides thetaiotaomicron VPI-5482 Endoglycosidase BT1285 D161A-E163A inactive version
Descriptor: Endo-beta-N-acetylglucosaminidase
Authors:Sastre, D.E, Sultana, N, Sundberg, E.J.
Deposit date:2023-09-09
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon