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1ZSE
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BU of 1zse by Molmil
RNA stemloop from bacteriophage Qbeta complexed with an N87S mutant MS2 Capsid
Descriptor: Coat protein, RNA HAIRPIN
Authors:Horn, W.T, Tars, K, Grahn, E, Helgstrand, C, Baron, A.J, Lago, H, Adams, C.J, Peabody, D.S, Phillips, S.E.V, Stonehouse, N.J, Liljas, L, Stockley, P.G.
Deposit date:2005-05-24
Release date:2006-05-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis of RNA Binding Discrimination between Bacteriophages Qbeta and MS2
Structure, 14, 2006
2KOC
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BU of 2koc by Molmil
NMR solution structure of a 14-mer hairpin RNA with cUUCGg tetraloop
Descriptor: RNA (5'-R(P*GP*GP*CP*AP*CP*UP*UP*CP*GP*GP*UP*GP*CP*C)-3')
Authors:Nozinovic, S, Fuertig, B, Jonker, H.R.A, Richter, C, Schwalbe, H.
Deposit date:2009-09-17
Release date:2009-12-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:High-resolution NMR structure of an RNA model system: the 14-mer cUUCGg tetraloop hairpin RNA
Nucleic Acids Res., 2009
2L1F
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BU of 2l1f by Molmil
Structure of a conserved retroviral RNA packaging element by NMR spectroscopy and cryo-electron tomography
Descriptor: RNA (65-MER), RNA (66-MER)
Authors:Summers, M.F, Irobalieva, R.N, Tolbert, B, Smalls-Manty, A, Iyalla, K, Loeliger, K, D'Souza, V, Khant, H, Schmid, M, Garcia, E, Telesnitsky, A, Chiu, W, Miyazaki, Y.
Deposit date:2010-07-28
Release date:2010-10-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of a conserved retroviral RNA packaging element by NMR spectroscopy and cryo-electron tomography.
J.Mol.Biol., 404, 2010
2N2P
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BU of 2n2p by Molmil
Solution structure of a double base-pair inversion mutant of murine tumour necrosis factor alpha CDE-23 RNA
Descriptor: RNA (5'-R(P*GP*CP*AP*UP*GP*UP*UP*UP*AP*GP*UP*GP*UP*CP*UP*AP*AP*AP*CP*GP*GP*UP*U)-3')
Authors:Codutti, L, Leppek, K, Zalesak, J, Windeisen, V, Masiewicz, P, Stoecklin, G, Carlomagno, T.
Deposit date:2015-05-11
Release date:2015-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Distinct, Sequence-Induced Conformation Is Required for Recognition of the Constitutive Decay Element RNA by Roquin.
Structure, 23, 2015
2N2O
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BU of 2n2o by Molmil
Structure of murine tumour necrosis factor alpha CDE RNA
Descriptor: RNA (5'-R(P*GP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*UP*U)-3')
Authors:Codutti, L, Leppek, K, Zalesak, J, Windeisen, V, Masiewicz, P, Stoecklin, G, Carlomagno, T.
Deposit date:2015-05-11
Release date:2015-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Distinct, Sequence-Induced Conformation Is Required for Recognition of the Constitutive Decay Element RNA by Roquin.
Structure, 23, 2015
1ELH
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BU of 1elh by Molmil
NMR ANALYSIS OF HELIX I FROM THE 5S RNA OF ESCHERICHIA COLI
Descriptor: RNA (5'-R(*AP*AP*CP*UP*GP*CP*CP*AP*GP*GP*CP*AP*U)-3'), RNA (5'-R(*UP*UP*GP*CP*CP*UP*GP*GP*CP*GP*GP*C)-3')
Authors:White, S, Moore, P.
Deposit date:1993-06-23
Release date:1994-01-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR analysis of helix I from the 5S RNA of Escherichia coli.
Biochemistry, 31, 1992
1F5U
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BU of 1f5u by Molmil
SOLUTION STRUCTURE OF THE KISSING DIMER OF H3 GACG STEM-LOOP IN THE 5'-END DIMERIZATION SIGNAL OF MOLONEY MURINE LEUKEMIA VIRUS GENOMIC RNA
Descriptor: RNA (5'-R(*GP*GP*UP*GP*GP*GP*AP*GP*AP*CP*GP*UP*CP*CP*CP*AP*CP*C)-3')
Authors:Kim, C.-H, Tinoco Jr, I.
Deposit date:2000-06-16
Release date:2000-08-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A retroviral RNA kissing complex containing only two G.C base pairs.
Proc.Natl.Acad.Sci.USA, 97, 2000
1XSG
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Solution structure of E.coli RNase P RNA P4 stem oligoribonucleotide, U69A mutation
Descriptor: RNase P RNA P4 stem
Authors:Schmitz, M.
Deposit date:2004-10-19
Release date:2004-12-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Change of RNase P RNA function by single base mutation correlates with perturbation of metal ion binding in P4 as determined by NMR spectroscopy
Nucleic Acids Res., 32, 2004
1R9F
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BU of 1r9f by Molmil
Crystal structure of p19 complexed with 19-bp small interfering RNA
Descriptor: 5'-R(*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3', 5'-R(*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3', Core protein P19, ...
Authors:Ye, K, Malinina, L, Patel, D.J.
Deposit date:2003-10-28
Release date:2004-01-27
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Recognition of small interfering RNA by a viral suppressor of RNA
Nature, 426, 2003
1XSH
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Solution structure of E.coli RNase P RNA P4 stem oligoribonucleotide, U69C/C70U mutation
Descriptor: RNase P RNA P4 stem
Authors:Schmitz, M.
Deposit date:2004-10-19
Release date:2004-12-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Change of RNase P RNA function by single base mutation correlates with perturbation of metal ion binding in P4 as determined by NMR spectroscopy
Nucleic Acids Res., 32, 2004
299D
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BU of 299d by Molmil
CAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: THE HAMMERHEAD RIBOZYME
Descriptor: RNA HAMMERHEAD RIBOZYME
Authors:Scott, W.G, Murray, J.B, Arnold, J.R.P, Stoddard, B.L, Klug, A.
Deposit date:1996-12-14
Release date:1997-01-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme.
Science, 274, 1996
3ELV
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BU of 3elv by Molmil
Crystal Structure of Full-Length Yeast Pml1p
Descriptor: Pre-mRNA leakage protein 1, SULFATE ION
Authors:Trowitzsch, S, Weber, G, L hrmann, R, Wahl, M.C.
Deposit date:2008-09-23
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the Pml1p subunit of the yeast precursor mRNA retention and splicing complex.
J.Mol.Biol., 385, 2009
6LSO
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BU of 6lso by Molmil
Crystal structure of a dimeric inhibited of peptidyl tRNA hydrolase at 1.76A resolution
Descriptor: Peptidyl-tRNA hydrolase
Authors:Bairagya, H.R, Ahmad, M.I, Sharma, P, Singh, T.P.
Deposit date:2020-01-17
Release date:2020-02-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of a dimeric inhibited of peptidyl tRNA hydrolase at 1.76A resolution
To Be Published
7JRS
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BU of 7jrs by Molmil
Crystal structures of artificially designed homomeric RNA nanoarchitectures
Descriptor: RNA 3D nanocage
Authors:Liu, D, Shao, Y, Piccirilli, J.A, Weizmann, Y.
Deposit date:2020-08-12
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Structures of artificially designed discrete RNA nanoarchitectures at near-atomic resolution.
Sci Adv, 7, 2021
7JRT
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BU of 7jrt by Molmil
Crystal structures of artificially designed homomeric RNA nanoarchitectures
Descriptor: RNA nano bracelet
Authors:Liu, D, Shao, Y, Piccirilli, J.A, Weizmann, Y.
Deposit date:2020-08-12
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Structures of artificially designed discrete RNA nanoarchitectures at near-atomic resolution.
Sci Adv, 7, 2021
1S77
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BU of 1s77 by Molmil
T7 RNAP product pyrophosphate elongation complex
Descriptor: DNA (5'-D(*GP*CP*CP*GP*TP*GP*CP*GP*CP*AP*TP*TP*CP*GP*CP*CP*GP*TP*GP*TP*T)-3'), DNA (5'-D(*TP*TP*TP*AP*CP*GP*TP*TP*GP*CP*GP*CP*AP*CP*GP*GP*C)-3'), DNA-directed RNA polymerase, ...
Authors:Yin, Y.W, Steitz, T.A.
Deposit date:2004-01-29
Release date:2004-03-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:The structural mechanism of translocation and helicase activity in T7 RNA polymerase.
Cell(Cambridge,Mass.), 116, 2004
6Q8V
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BU of 6q8v by Molmil
Structure of the standard kink turn HmKt-7 variant A2bm6A.
Descriptor: RNA (5'-R(*GP*GP*CP*GP*AP*AP*GP*(6MZ)P*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3')
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2018-12-16
Release date:2019-07-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Effect of methylation of adenine N6on kink turn structure depends on location.
Rna Biol., 16, 2019
438D
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BU of 438d by Molmil
STRUCTURE OF AN RNA DUPLEX R(GGGCGCUCC)2 WITH NON-ADJACENT G.U BASE PAIRS
Descriptor: RNA (5'-R(*GP*GP*GP*CP*GP*CP*UP*CP*C)-3')
Authors:Shi, K, Wahl, M.C, Sundaralingam, M.
Deposit date:1998-12-28
Release date:1999-05-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an RNA duplex r(G GCGC CC)2 with non-adjacent G*U base pairs.
Nucleic Acids Res., 27, 1999
255D
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BU of 255d by Molmil
CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS
Descriptor: RNA (5'-R(*GP*GP*AP*CP*UP*UP*CP*GP*GP*UP*CP*C)-3')
Authors:Holbrook, S.R, Cheong, C, Tinoco Jr, I, Kim, S.-H.
Deposit date:1993-12-21
Release date:1995-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base pairs.
Nature, 353, 1991
3PHP
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BU of 3php by Molmil
STRUCTURE OF THE 3' HAIRPIN OF THE TYMV PSEUDOKNOT: PREFORMATION IN RNA FOLDING
Descriptor: RNA (5'-R(*GP*GP*UP*UP*CP*CP*GP*AP*GP*GP*GP*UP*CP*AP*UP*CP*GP*GP*AP*AP*CP*CP*A) -3')
Authors:Kolk, M.H, Van Der Graaf, M, Wijmenga, S.S, Pleij, C.W.A, Heus, H.A, Hilbers, C.W.
Deposit date:1998-10-13
Release date:1998-10-21
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of the 3'-hairpin of the TYMV pseudoknot: preformation in RNA folding.
EMBO J., 17, 1998
405D
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BU of 405d by Molmil
STRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHES
Descriptor: RNA (5'-R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3')
Authors:Pan, B, Sundaralingam, M, Mitra, S.N.
Deposit date:1998-06-17
Release date:1999-01-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a 16-mer RNA duplex r(GCAGACUUAAAUCUGC)2 with wobble C.A+ mismatches.
J.Mol.Biol., 283, 1998
1S76
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T7 RNA polymerase alpha beta methylene ATP elongation complex
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA (5'-D(P*GP*CP*CP*GP*TP*GP*CP*GP*CP*AP*TP*TP*CP*GP*CP*CP*GP*TP*GP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*AP*CP*GP*TP*TP*GP*CP*GP*CP*AP*CP*GP*GP*C)-3'), ...
Authors:Yin, Y.W, Steitz, T.A.
Deposit date:2004-01-29
Release date:2004-03-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:The structural mechanism of translocation and helicase activity in T7 RNA polymerase.
Cell(Cambridge,Mass.), 116, 2004
5C5W
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BU of 5c5w by Molmil
1.25 A resolution structure of an RNA 20-mer
Descriptor: RNA (5'-R(P*CP*CP*UP*GP*AP*GP*UP*UP*CP*AP*AP*UP*UP*CP*UP*AP*GP*CP*G)-3')
Authors:Stewart, M, Valkov, E.
Deposit date:2015-06-22
Release date:2015-10-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:1.25 angstrom resolution structure of an RNA 20-mer that binds to the TREX2 complex.
Acta Crystallogr.,Sect.F, 71, 2015
1L3D
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Low Resolution Crystal Structure of a Viral RNA Pseudoknot
Descriptor: RNA pseudoknot
Authors:Egli, M, Minasov, G, Su, L, Rich, A.
Deposit date:2002-02-26
Release date:2002-03-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Metal ions and flexibility in a viral RNA pseudoknot at atomic resolution.
Proc.Natl.Acad.Sci.USA, 99, 2002
2E7Y
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High resolution structure of T. maritima tRNase Z
Descriptor: S-1,2-PROPANEDIOL, SULFATE ION, ZINC ION, ...
Authors:Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-15
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The structure of the flexible arm of Thermotoga maritima tRNase Z differs from those of homologous enzymes
Acta Crystallogr.,Sect.F, 63, 2007

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