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6E4T
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BU of 6e4t by Molmil
Structure of AMPK bound to activator
Descriptor: 1-O-{6-chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1H-indole-3-carbonyl}-beta-D-glucopyranuronic acid, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ...
Authors:Calabrese, M.F, Kurumbail, R.G.
Deposit date:2018-07-18
Release date:2018-08-08
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Acyl Glucuronide Metabolites of 6-Chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1 H-indole-3-carboxylic Acid (PF-06409577) and Related Indole-3-carboxylic Acid Derivatives are Direct Activators of Adenosine Monophosphate-Activated Protein Kinase (AMPK).
J. Med. Chem., 61, 2018
6E4U
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BU of 6e4u by Molmil
Structure of AMPK bound to activator
Descriptor: 1-O-{6-chloro-5-[6-(dimethylamino)-2-methoxypyridin-3-yl]-1H-indole-3-carbonyl}-beta-D-glucopyranuronic acid, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ...
Authors:Calabrese, M.F, Kurumbail, R.G.
Deposit date:2018-07-18
Release date:2018-08-08
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Acyl Glucuronide Metabolites of 6-Chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1 H-indole-3-carboxylic Acid (PF-06409577) and Related Indole-3-carboxylic Acid Derivatives are Direct Activators of Adenosine Monophosphate-Activated Protein Kinase (AMPK).
J. Med. Chem., 61, 2018
6E4W
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BU of 6e4w by Molmil
Structure of AMPK bound to activator
Descriptor: 1-O-(4,6-difluoro-5-{4-[(2S)-oxan-2-yl]phenyl}-1H-indole-3-carbonyl)-beta-D-glucopyranuronic acid, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ...
Authors:Calabrese, M.F, Kurumbail, R.G.
Deposit date:2018-07-18
Release date:2018-08-08
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Acyl Glucuronide Metabolites of 6-Chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1 H-indole-3-carboxylic Acid (PF-06409577) and Related Indole-3-carboxylic Acid Derivatives are Direct Activators of Adenosine Monophosphate-Activated Protein Kinase (AMPK).
J. Med. Chem., 61, 2018
4GJU
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BU of 4gju by Molmil
5-Methylcytosine modified DNA oligomer
Descriptor: 5-Methylcytosine modified DNA oligomer, MAGNESIUM ION
Authors:Spingler, B, Renciuk, D, Vorlickova, M.
Deposit date:2012-08-10
Release date:2013-08-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.412 Å)
Cite:Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine.
Nucleic Acids Res., 41, 2013
6EBN
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BU of 6ebn by Molmil
Crystal structure of Psilocybe cubensis noncanonical aromatic amino acid decarboxylase
Descriptor: FORMIC ACID, GLYCEROL, SODIUM ION, ...
Authors:Torrens-Spence, M.P, Chun-Ting, L, Pluskal, T, Chung, Y.K, Weng, J.K.
Deposit date:2018-08-06
Release date:2018-12-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9663111 Å)
Cite:Monoamine Biosynthesis via a Noncanonical Calcium-Activatable Aromatic Amino Acid Decarboxylase in Psilocybin Mushroom.
ACS Chem. Biol., 13, 2018
4GLC
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BU of 4glc by Molmil
DNA dodecamer containing 5-hydroxymethyl-cytosine
Descriptor: DNA (5'-D(*CP*GP*(5HC)P*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Spingler, B, Renciuk, D, Vorlickova, M.
Deposit date:2012-08-14
Release date:2013-08-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.831 Å)
Cite:Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine.
Nucleic Acids Res., 41, 2013
6F0Q
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BU of 6f0q by Molmil
Crystal structure of Pizza6-AYW
Descriptor: Pizza6-AYW
Authors:Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D.
Deposit date:2017-11-20
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.
Biochem. Biophys. Res. Commun., 497, 2018
1P99
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BU of 1p99 by Molmil
1.7A crystal structure of protein PG110 from Staphylococcus aureus
Descriptor: GLYCINE, Hypothetical protein PG110, METHIONINE
Authors:Zhang, R, Zhou, M, Joachimiak, G, Schneewind, O, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-05-09
Release date:2004-01-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The membrane-associated lipoprotein-9 GmpC from Staphylococcus aureus binds the dipeptide GlyMet via side chain interactions.
Biochemistry, 43, 2004
5YSC
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BU of 5ysc by Molmil
Crystal Structure of periplasmic Vitamin B12 binding protein BtuF of Vibrio cholerae
Descriptor: CYANOCOBALAMIN, SULFATE ION, Vitamin B12-binding protein
Authors:Agarwal, S, Ghosh, B, Dasgupta, J.
Deposit date:2017-11-13
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.673 Å)
Cite:Mechanistic basis of vitamin B12 and cobinamide salvaging by the Vibrio species.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
6MQU
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BU of 6mqu by Molmil
PL5, synthetic transmembrane domain variant of human phospholamban
Descriptor: PL5, designed TM pentamer
Authors:Mravic, M, Thomaston, J.L, DeGrado, W.F.
Deposit date:2018-10-10
Release date:2019-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Packing of apolar side chains enables accurate design of highly stable membrane proteins.
Science, 363, 2019
6F0S
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BU of 6f0s by Molmil
Crystal structure of Pizza6-SYW
Descriptor: Pizza6-SYW
Authors:Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D.
Deposit date:2017-11-20
Release date:2018-03-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.
Biochem. Biophys. Res. Commun., 497, 2018
6F0T
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BU of 6f0t by Molmil
Crystal structure of Pizza6-SFW
Descriptor: GLYCEROL, Pizza6-SFW
Authors:Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D.
Deposit date:2017-11-20
Release date:2018-03-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.
Biochem. Biophys. Res. Commun., 497, 2018
5YS7
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BU of 5ys7 by Molmil
Crystal structure of an OspA mutant
Descriptor: Outer Surface Protein A
Authors:Takada, S, Makabe, K.
Deposit date:2017-11-13
Release date:2018-11-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of an OspA mutant
To Be Published
6NEK
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BU of 6nek by Molmil
Crystal structure of a consensus PDZ domain
Descriptor: 1,2-ETHANEDIOL, Consensus PDZ domain
Authors:Sun, Y.J, Gakhar, L, Fuentes, E.J.
Deposit date:2018-12-17
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Consensus PDZ domain
To be published
4LQU
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BU of 4lqu by Molmil
1.60A resolution crystal structure of a superfolder green fluorescent protein (W57G) mutant
Descriptor: Green fluorescent protein
Authors:Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J.
Deposit date:2013-07-19
Release date:2013-12-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.
J.Am.Chem.Soc., 135, 2013
6OLN
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BU of 6oln by Molmil
Controlling the Self-Assembly of Synthetic Metal-Coordinating Coiled-Coil Peptides: Orthorhombic Lattice from a Trimeric Coiled Coil
Descriptor: CHLORIDE ION, COPPER (II) ION, Designed trimeric coiled coil peptide
Authors:Scheib, K.A, Horne, W.S.
Deposit date:2019-04-16
Release date:2020-02-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Understanding and controlling the metal-directed assembly of terpyridine-functionalized coiled-coil peptides.
Chem.Commun.(Camb.), 55, 2019
6RLH
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BU of 6rlh by Molmil
The structure of 3fPizza6-SH obtained via vapour diffusion
Descriptor: 3fPizza6-SH
Authors:Noguchi, H, Voet, A.R.D.
Deposit date:2019-05-02
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Self-assembled Pizza proteins
To Be Published
4NTR
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BU of 4ntr by Molmil
Crystal structure of macrocycles containing Abeta 17-23 (LVFFAED) and Abeta 30-36 (AII(SAR)L(ORN)V)
Descriptor: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LVFFAED(ORN)AII(SAR)L(ORN)V, SODIUM ION
Authors:Spencer, R.K, Li, H, Nowick, J.S.
Deposit date:2013-12-02
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36).
J.Am.Chem.Soc., 136, 2014
6NL6
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BU of 6nl6 by Molmil
Crystal structure of mutant B1 immunoglobulin-binding domain of Streptococcal Protein G (T16F, T18A, V21E, T25L, K28Y, V29I, K31R, Q32H, Y33L, N35K, D36H, N37Q)
Descriptor: CHLORIDE ION, Immunoglobulin G-binding protein G, ZINC ION
Authors:Huxford, T, Stec, B, Maniaci, B.
Deposit date:2019-01-08
Release date:2019-01-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Design of High-Affinity Metal-Controlled Protein Dimers.
Biochemistry, 58, 2019
6BZX
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BU of 6bzx by Molmil
Structure of the artificial complex alpha-Rep/Octarellin V.1 crystallized by counter diffusion in a capillary
Descriptor: Octarellin V.1, SODIUM ION, alpha-Rep
Authors:Aedo, F, Contreras-Martel, C, Martinez-Oyanedel, J, Bunster, M, Minard, P, Van de Weerdt, C, Figueroa, M.
Deposit date:2017-12-26
Release date:2019-01-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.107 Å)
Cite:Crystallization of the artificial complex alpha-Rep/Octarellin V.1 by counter diffusion allowed to have a most complete structure
To Be Published
6NJF
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BU of 6njf by Molmil
Solution NMR Structure of DANCER3-F34A, a rigid and natively folded single mutant of the dynamic protein DANCER-3
Descriptor: Immunoglobulin G-binding protein G
Authors:Damry, A.M, Mayer, M.M, Goto, N.K, Chica, R.A.
Deposit date:2019-01-03
Release date:2019-08-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Origin of conformational dynamics in a globular protein.
Commun Biol, 2, 2019
6OVU
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BU of 6ovu by Molmil
Coiled-coil Trimer with Glu:3,4-difluorophenylalanine:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:3,4-difluorophenylalanine:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-08
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
6OS8
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BU of 6os8 by Molmil
Coiled-coil Trimer with Glu:p-fluorophenylalanine:Lys Triad
Descriptor: Coiled-coil trimer with Glu:p-fluorophenylalanine:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-01
Release date:2020-04-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
4LQT
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BU of 4lqt by Molmil
1.10A resolution crystal structure of a superfolder green fluorescent protein (W57A) mutant
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein
Authors:Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J.
Deposit date:2013-07-19
Release date:2013-12-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.
J.Am.Chem.Soc., 135, 2013
6RLI
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BU of 6rli by Molmil
The structure of the self-assembled 3fPizza6-SH crystal
Descriptor: 3fPizza6-SH
Authors:Noguchi, H, Voet, A.R.D.
Deposit date:2019-05-02
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Self-assembled Pizza proteins
To Be Published

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PDB entries from 2024-07-17

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