Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7YMM
DownloadVisualize
BU of 7ymm by Molmil
PSII-Pcb Tetramer of Acaryochloris Marina
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Shen, L.L, Gao, Y.Z, Wang, W.D, Zhang, X, Shen, J.R, Wang, P.Y, Han, G.Y.
Deposit date:2022-07-28
Release date:2023-08-16
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of a unique PSII-Pcb tetrameric megacomplex in a chlorophyll d -containing cyanobacterium.
Sci Adv, 10, 2024
7YMI
DownloadVisualize
BU of 7ymi by Molmil
PSII-Pcb Dimer of Acaryochloris Marina
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Shen, L.L, Gao, Y.Z, Wang, W.D, Zhang, X, Shen, J.R, Wang, P.Y, Han, G.Y.
Deposit date:2022-07-28
Release date:2023-08-16
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of a unique PSII-Pcb tetrameric megacomplex in a chlorophyll d -containing cyanobacterium.
Sci Adv, 10, 2024
6JLU
DownloadVisualize
BU of 6jlu by Molmil
Structure of PSII-FCP supercomplex from a centric diatom Chaetoceros gracilis at 3.02 angstrom resolution
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'-yl acetate, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Pi, X, Zhao, S, Wang, W, Kuang, T, Sui, S, Shen, J.
Deposit date:2019-03-06
Release date:2019-07-31
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:The pigment-protein network of a diatom photosystem II-light-harvesting antenna supercomplex.
Science, 365, 2019
4UBR
DownloadVisualize
BU of 4ubr by Molmil
Crystal structure of Pseudomonas aeruginosa N-aetyltransferase PA4534
Descriptor: GLYCEROL, Putative acetyltransferase
Authors:Choe, J, Shin, S.
Deposit date:2014-08-13
Release date:2015-08-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of Pseudomonas aeruginosa N-aetyltransferase PA4534
To Be Published
4UM5
DownloadVisualize
BU of 4um5 by Molmil
Crystal structure of 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Moraxella catarrhalis in complex with Magnesium ion and Phosphate ion
Descriptor: 1,2-ETHANEDIOL, 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE PHOSPHATASE KDSC, MAGNESIUM ION, ...
Authors:Dhindwal, S, Tomar, S, Kumar, P.
Deposit date:2014-05-15
Release date:2015-02-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Ligand-Bound Structures of 3-Deoxy-D-Manno-Octulosonate 8-Phosphate Phosphatase from Moraxella Catarrhalis Reveal a Water Channel Connecting to the Active Site for the Second Step of Catalysis
Acta Crystallogr.,Sect.D, 71, 2015
6PTY
DownloadVisualize
BU of 6pty by Molmil
Soluble model of human CuA (Tt3Lh)
Descriptor: Cytochrome c oxidase subunit 2, DINUCLEAR COPPER ION, GLYCEROL, ...
Authors:Giannini, E, Lisa, M.N, Morgada, M.N, Alzari, P.M, Vila, A.J.
Deposit date:2019-07-16
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Unexpected electron spin density on the axial methionine ligand in CuAsuggests its involvement in electron pathways.
Chem.Commun.(Camb.), 56, 2020
4UBE
DownloadVisualize
BU of 4ube by Molmil
CRYSTAL STRUCTURE OF M TUBERCULOSIS ADENOSINE KINASE COMPLEXED WITH 2-FLURO ADENOSINE
Descriptor: 2-(6-AMINO-2-FLUORO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, Adenosine kinase
Authors:Reddy, M.C.M, Palaninathan, S.K, Shetty, N.D, Owen, J.L, Watson, M.D, Sacchettini, J.C.
Deposit date:2014-08-12
Release date:2014-09-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.933 Å)
Cite:CRYSTAL STRUCTURE OF M TUBERCULOSIS ADENOSINE KINASE COMPLEXED WITH 2-FLURO ADENOSINE
TO BE PUBLISHED
1RZH
DownloadVisualize
BU of 1rzh by Molmil
PHOTOSYNTHETIC REACTION CENTER DOUBLE MUTANT FROM RHODOBACTER SPHAEROIDES WITH ASP L213 REPLACED WITH ASN AND ARG M233 REPLACED WITH CYS IN THE CHARGE-NEUTRAL DQAQB STATE (TRIGONAL FORM)
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Xu, Q, Axelrod, H.L, Abresch, E.C, Paddock, M.L, Okamura, M.Y, Feher, G.
Deposit date:2003-12-24
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-Ray Structure Determination of Three Mutants of the Bacterial Photosynthetic Reaction Centers from Rb. sphaeroides; Altered Proton Transfer Pathways.
STRUCTURE, 12, 2004
4UBU
DownloadVisualize
BU of 4ubu by Molmil
Structure of a modified C93S variant of the 3-ketoacyl-CoA thiolase FadA5 from M. tuberculosis in complex with CoA
Descriptor: Acetyl-CoA acetyltransferase FadA5, COENZYME A, GLYCEROL
Authors:Schaefer, C.M, Kisker, C.
Deposit date:2014-08-13
Release date:2014-12-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:FadA5 a Thiolase from Mycobacterium tuberculosis: A Steroid-Binding Pocket Reveals the Potential for Drug Development against Tuberculosis.
Structure, 23, 2015
6PW9
DownloadVisualize
BU of 6pw9 by Molmil
Cryo-EM structure of human NatE/HYPK complex
Descriptor: ACETYL COENZYME *A, Huntingtin-interacting protein K, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Deng, S, Marmorstein, R.
Deposit date:2019-07-22
Release date:2020-02-19
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (4.03 Å)
Cite:Molecular basis for N-terminal acetylation by human NatE and its modulation by HYPK.
Nat Commun, 11, 2020
2BUE
DownloadVisualize
BU of 2bue by Molmil
Structure of AAC(6')-Ib in complex with Ribostamycin and Coenzyme A.
Descriptor: AAC(6')-IB, CALCIUM ION, COENZYME A, ...
Authors:Vetting, M.W, Park, C.H, Hedge, S.S, Hooper, D.C, Blanchard, J.S.
Deposit date:2008-03-20
Release date:2008-09-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanistic and Structural Analysis of Aminoglycoside N-Acetyltransferase Aac(6')-Ib and its Bifunctional, Fluoroquinolone-Active Aac(6')-Ib-Cr Variant.
Biochemistry, 47, 2008
4UB6
DownloadVisualize
BU of 4ub6 by Molmil
Native structure of photosystem II (dataset-1) by a femtosecond X-ray laser
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Suga, M, Akita, F, Hirata, K, Ueno, G, Murakami, H, Nakajima, Y, Shimizu, T, Yamashita, K, Yamamoto, M, Ago, H, Shen, J.R.
Deposit date:2014-08-12
Release date:2014-12-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Native structure of photosystem II at 1.95 angstrom resolution viewed by femtosecond X-ray pulses.
Nature, 517, 2015
4UMF
DownloadVisualize
BU of 4umf by Molmil
Crystal structure of 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Moraxella catarrhalis in complex with Magnesium ion, Phosphate ion and KDO molecule
Descriptor: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE PHOSPHATASE KDSC, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, MAGNESIUM ION, ...
Authors:Dhindwal, S, Tomar, S, Kumar, P.
Deposit date:2014-05-16
Release date:2015-02-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Ligand-Bound Structures of 3-Deoxy-D-Manno-Octulosonate 8-Phosphate Phosphatase from Moraxella Catarrhalis Reveal a Water Channel Connecting to the Active Site for the Second Step of Catalysis
Acta Crystallogr.,Sect.D, 71, 2015
4UBW
DownloadVisualize
BU of 4ubw by Molmil
Apo structure of the 3-ketoacyl-CoA thiolase FadA5 from M. tuberculosis
Descriptor: Acetyl-CoA acetyltransferase FadA5, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Schaefer, C.M, Kisker, C.
Deposit date:2014-08-13
Release date:2014-12-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:FadA5 a Thiolase from Mycobacterium tuberculosis: A Steroid-Binding Pocket Reveals the Potential for Drug Development against Tuberculosis.
Structure, 23, 2015
2BYZ
DownloadVisualize
BU of 2byz by Molmil
Structure of E.coli KAS I H298Q mutant in complex with C12 fatty acid
Descriptor: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, AMMONIUM ION, LAURIC ACID
Authors:Olsen, J.G, von Wettstein-Knowles, P, Henriksen, A.
Deposit date:2005-08-09
Release date:2006-02-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fatty acid synthesis. Role of active site histidines and lysine in Cys-His-His-type beta-ketoacyl-acyl carrier protein synthases.
FEBS J., 273, 2006
4UP1
DownloadVisualize
BU of 4up1 by Molmil
Crystal structure of native human Thymidylate synthase in active form
Descriptor: SULFATE ION, THYMIDYLATE SYNTHASE
Authors:Deschamps, P, Rety, S, Leulliot, N.
Deposit date:2014-06-11
Release date:2015-06-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.991 Å)
Cite:Crystal structure of the active form of native human thymidylate synthase in the absence of bound substrates.
Acta Crystallogr F Struct Biol Commun, 73, 2017
2BYX
DownloadVisualize
BU of 2byx by Molmil
KAS I LYS328ALA Mutant in complex with fatty acid
Descriptor: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, AMMONIUM ION, LAURIC ACID
Authors:Olsen, J.G, von Wettstein-Knowles, P, Henriksen, A.
Deposit date:2005-08-09
Release date:2006-02-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fatty acid synthesis. Role of active site histidines and lysine in Cys-His-His-type beta-ketoacyl-acyl carrier protein synthases.
FEBS J., 273, 2006
1S2V
DownloadVisualize
BU of 1s2v by Molmil
Crystal structure of phosphoenolpyruvate mutase complexed with Mg(II)
Descriptor: MAGNESIUM ION, Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
6Q11
DownloadVisualize
BU of 6q11 by Molmil
Crystal structure of MurA from Clostridium difficile, mutation C116S, in the presence of URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, ...
Authors:Dopkins, B.J, Call, C.J, Thoden, J.B, Holden, H.M.
Deposit date:2019-08-02
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of MurA from Clostridium difficile, mutation C116S, in the presence of URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
To Be Published
7ZP0
DownloadVisualize
BU of 7zp0 by Molmil
Crystal structure of CusS histidine kinase catalytic core from Escherichia coli
Descriptor: 1,2-ETHANEDIOL, Sensor protein
Authors:Cociurovscaia, A, Bujacz, G, Pietrzyk-Brzezinska, A.
Deposit date:2022-04-26
Release date:2022-08-31
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:Crystal structure of the Escherichia coli CusS kinase core.
J.Struct.Biol., 214, 2022
4UOR
DownloadVisualize
BU of 4uor by Molmil
Structure of lipoteichoic acid synthase LtaS from Listeria monocytogenes in complex with glycerol phosphate
Descriptor: (2R)-2,3-dihydroxypropyl phosphate, LIPOTEICHOIC ACID SYNTHASE, MAGNESIUM ION
Authors:Campeotto, I, Freemont, P, Grundling, A.
Deposit date:2014-06-09
Release date:2014-08-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Structural and mechanistic insight into the Listeria monocytogenes two-enzyme lipoteichoic acid synthesis system.
J. Biol. Chem., 289, 2014
2BZ3
DownloadVisualize
BU of 2bz3 by Molmil
Structure of E.coli KAS I H298E mutant in complex with C12 fatty acid
Descriptor: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, AMMONIUM ION, LAURIC ACID, ...
Authors:Olsen, J.G, von Wettstein-Knowles, P, Henriksen, A.
Deposit date:2005-08-10
Release date:2006-02-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fatty acid synthesis. Role of active site histidines and lysine in Cys-His-His-type beta-ketoacyl-acyl carrier protein synthases.
FEBS J., 273, 2006
4UOP
DownloadVisualize
BU of 4uop by Molmil
Crystal structure of the lipoteichoic acid synthase LtaP from Listeria monocytogenes
Descriptor: CHLORIDE ION, LIPOTEICHOIC ACID PRIMASE, MAGNESIUM ION, ...
Authors:Campeotto, I, Freemont, P, Grundling, A.
Deposit date:2014-06-06
Release date:2014-08-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and mechanistic insight into the Listeria monocytogenes two-enzyme lipoteichoic acid synthesis system.
J. Biol. Chem., 289, 2014
2C1U
DownloadVisualize
BU of 2c1u by Molmil
CRYSTAL STRUCTURE OF THE DI-HAEM CYTOCHROME C PEROXIDASE FROM PARACOCCUS PANTOTROPHUS - OXIDISED FORM
Descriptor: CALCIUM ION, DI-HAEM CYTOCHROME C PEROXIDASE, HEME C
Authors:Echalier, A, Fulop, V.
Deposit date:2005-09-21
Release date:2006-01-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Activation and Catalysis of the Di-Heme Cytochrome C Peroxidase from Paracoccus Pantotrophus
Structure, 14, 2006
6PTT
DownloadVisualize
BU of 6ptt by Molmil
Soluble model of Arabidopsis thaliana CuA (Tt3LAt)
Descriptor: Cytochrome c oxidase subunit 2, DINUCLEAR COPPER ION
Authors:Lisa, M.N, Giannini, E, Llases, M.E, Alzari, P.M, Vila, A.J.
Deposit date:2019-07-16
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Unexpected electron spin density on the axial methionine ligand in CuAsuggests its involvement in electron pathways.
Chem.Commun.(Camb.), 56, 2020

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon