PDB: 56562 resultsInfo pagesStatus searchChemie searchBIRD

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6T3H	Structure of the Rap conjugation gene regulator of the plasmid pLS20 in apo form Descriptor: Response regulator aspartate phosphatase Authors: Crespo, I, Bernardo, N, Meijer, W.J.J, Boer, D.R. Deposit date: 2019-10-11 Release date: 2020-06-24 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3.039 Å) Cite: Inactivation of the dimeric RappLS20 anti-repressor of the conjugation operon is mediated by peptide-induced tetramerization. Nucleic Acids Res., 48, 2020
6D3B	INFLUENZA VIRUS NEURAMINIDASE SUBTYPE N9 (TERN) APO FORM Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Streltsov, V.A, Schmidt, P, McKimm-Breschkin, J. Deposit date: 2018-04-15 Release date: 2019-01-23 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structure of an Influenza A virus N9 neuraminidase with a tetrabrachion-domain stalk. Acta Crystallogr.,Sect.F, 75, 2019
6GE1	Solution structure of the r(UGGUGGU)4 RNA quadruplex Descriptor: RNA (5'-R(*UP*GP*GP*UP*GP*GP*U)-3') Authors: Andralojc, W, Gdaniec, Z. Deposit date: 2018-04-25 Release date: 2018-10-31 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Unraveling the structural basis for the exceptional stability of RNA G-quadruplexes capped by a uridine tetrad at the 3' terminus. RNA, 25, 2019
7K14	Ternary soak structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens with FMN and methanesulfonate Descriptor: Alkanesulfonate monooxygenase, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ... Authors: Liew, J.J.M, Dowling, D.P, El Saudi, I.M. Deposit date: 2020-09-07 Release date: 2021-05-26 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Structures of the alkanesulfonate monooxygenase MsuD provide insight into C-S bond cleavage, substrate scope, and an unexpected role for the tetramer. J.Biol.Chem., 297, 2021
7JW9	Ternary cocrystal structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens Descriptor: Alkanesulfonate monooxygenase, FLAVIN MONONUCLEOTIDE, SODIUM ION, ... Authors: Liew, J.J.M, Dowling, D.P. Deposit date: 2020-08-25 Release date: 2021-05-26 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.39 Å) Cite: Structures of the alkanesulfonate monooxygenase MsuD provide insight into C-S bond cleavage, substrate scope, and an unexpected role for the tetramer. J.Biol.Chem., 297, 2021
7K64	Binary titrated soak structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens with FMN Descriptor: Alkanesulfonate monooxygenase, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ... Authors: Liew, J.J.M, Dowling, D.P. Deposit date: 2020-09-18 Release date: 2021-05-26 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structures of the alkanesulfonate monooxygenase MsuD provide insight into C-S bond cleavage, substrate scope, and an unexpected role for the tetramer. J.Biol.Chem., 297, 2021
7JYB	Binary soak structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens with FMN Descriptor: Alkanesulfonate monooxygenase, FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, ... Authors: Liew, J.J.M, Dowling, D.P, El Saudi, I.M. Deposit date: 2020-08-30 Release date: 2021-05-26 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.76 Å) Cite: Structures of the alkanesulfonate monooxygenase MsuD provide insight into C-S bond cleavage, substrate scope, and an unexpected role for the tetramer. J.Biol.Chem., 297, 2021
7JV3	Crystal structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens Descriptor: Alkanesulfonate monooxygenase Authors: Liew, J.J.M, Dowling, D.P. Deposit date: 2020-08-20 Release date: 2021-05-26 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structures of the alkanesulfonate monooxygenase MsuD provide insight into C-S bond cleavage, substrate scope, and an unexpected role for the tetramer. J.Biol.Chem., 297, 2021
3VGV	E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593 Descriptor: Nucleoside diphosphate kinase Authors: Okazaki, N, Yonezawa, Y, Arai, S, Matsumoto, F, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R. Deposit date: 2011-08-21 Release date: 2012-07-11 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.5 Å) Cite: A structural mechanism for dimeric to tetrameric oligomer conversion in Halomonas sp. nucleoside diphosphate kinase Protein Sci., 21, 2012
4JEP	Crystal structure of Toxoplasma gondii nucleoside triphosphate diphosphohydrolase 1 (NTPDase1) Descriptor: Nucleoside-triphosphatase 2 Authors: Krug, U, Totzauer, R, Strater, N. Deposit date: 2013-02-27 Release date: 2013-04-10 Last modified: 2017-11-15 Method: X-RAY DIFFRACTION (3.1 Å) Cite: The crystal structure of Toxoplasma gondii nucleoside triphosphate diphosphohydrolase 1 represents a conformational intermediate in the reductive activation mechanism of the tetrameric enzyme. Proteins, 81, 2013
8SDJ	Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM20 Coiled-Coil Domain Descriptor: Pyrin Authors: Lou, X.H, Ma, B.B, Zhuang, Y, Li, X.C. Deposit date: 2023-04-06 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM20 Coiled-Coil Domain To Be Published
6PYE	Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with NR160 Descriptor: 1,2-ETHANEDIOL, Hdac6 protein, N-[(1-benzyl-1H-tetrazol-5-yl)methyl]-N-{[4-(hydroxycarbamoyl)phenyl]methyl}-2-(trifluoromethyl)benzamide, ... Authors: Osko, J.D, Christianson, D.W. Deposit date: 2019-07-29 Release date: 2020-07-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.480003 Å) Cite: Multicomponent Synthesis, Binding Mode, and Structure-Activity Relationship of Selective Histone Deacetylase 6 (HDAC6) Inhibitors with Bifurcated Capping Groups. J.Med.Chem., 63, 2020
8SDI	Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain Descriptor: Tripartite motif-containing protein 45 Authors: Lou, X.H, Ma, B.B, Zhuang, Y, Li, X.C. Deposit date: 2023-04-06 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain To Be Published
8ELO	Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-225 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CC12.1 Fab heavy chain, CC12.1 Fab light chain, ... Authors: Liu, H, Wilson, I.A. Deposit date: 2022-09-26 Release date: 2023-07-05 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.72 Å) Cite: Fully synthetic platform to rapidly generate tetravalent bispecific nanobody-based immunoglobulins. Proc.Natl.Acad.Sci.USA, 120, 2023
8ELQ	Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-255 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CC12.1 Fab heavy chain, CC12.1 Fab light chain, ... Authors: Liu, H, Wilson, I.A. Deposit date: 2022-09-26 Release date: 2023-07-05 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.21 Å) Cite: Fully synthetic platform to rapidly generate tetravalent bispecific nanobody-based immunoglobulins. Proc.Natl.Acad.Sci.USA, 120, 2023
8ELP	Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-240 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CC12.1 Fab heavy chain, CC12.1 Fab light chain, ... Authors: Liu, H, Wilson, I.A. Deposit date: 2022-09-26 Release date: 2023-07-05 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.83 Å) Cite: Fully synthetic platform to rapidly generate tetravalent bispecific nanobody-based immunoglobulins. Proc.Natl.Acad.Sci.USA, 120, 2023
5XOE	Crystal Structure of the apo Staphylococcus aureus phosphofructokinase Descriptor: ATP-dependent 6-phosphofructokinase Authors: Wang, C, Tian, T, Zang, J. Deposit date: 2017-05-27 Release date: 2018-06-20 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.98 Å) Cite: Structural Insights into the Regulation of Staphylococcus aureus Phosphofructokinase by Tetramer-Dimer Conversion. Biochemistry, 57, 2018
7EP9	The structure of carboxypeptidase from Fusobacterium nucleatum Descriptor: S9 family peptidase Authors: Wang, X, Jiang, Y.L. Deposit date: 2021-04-26 Release date: 2021-10-27 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.604 Å) Cite: Structural and biochemical analyses of the tetrameric carboxypeptidase S9Cfn from Fusobacterium nucleatum. Acta Crystallogr D Struct Biol, 77, 2021
8H9O	Crystal structure of voltage-gated sodium channel NavAb N49K mutant in sodium ion condition Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ... Authors: Irie, K. Deposit date: 2022-10-25 Release date: 2023-07-26 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (3.3 Å) Cite: The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel. Nat Commun, 14, 2023
8H9W	Crystal structure of voltage-gated sodium channel NavAb N49K mutant in calcium ion condition Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CHAPSO, ... Authors: Irie, K. Deposit date: 2022-10-25 Release date: 2023-07-26 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.7 Å) Cite: The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel. Nat Commun, 14, 2023
8H9X	Crystal structure of voltage-gated sodium channel NavAb N49K/L176Q mutant in sodium ion condition Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ... Authors: Irie, K, Oda, Y. Deposit date: 2022-10-25 Release date: 2023-07-26 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (3.4 Å) Cite: The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel. Nat Commun, 14, 2023
8HA2	Crystal structure of voltage-gated sodium channel NavAb N49K/L176G mutant in calcium ion condition Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CHAPSO, ... Authors: Irie, K, Oda, Y. Deposit date: 2022-10-26 Release date: 2023-07-26 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (3.3 Å) Cite: The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel. Nat Commun, 14, 2023
6DE8	Crystal Structure of Bifunctional Enzyme FolD-Methylenetetrahydrofolate Dehydrogenase/Cyclohydrolase from Campylobacter jejuni Descriptor: Bifunctional protein FolD, CHLORIDE ION, GLYCEROL, ... Authors: Kim, Y, Makowska-Grzyska, M, Zhang, R, Peterson, S.N, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2018-05-11 Release date: 2018-05-30 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.104 Å) Cite: Crystal Structure of Bifunctional Enzyme FolD-Methylenetetrahydrofolate Dehydrogenase/Cyclohydrolase from Campylobacter jejuni To Be Published
8H9Y	Crystal structure of voltage-gated sodium channel NavAb N49K/L176Q mutant in calcium ion condition Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CHAPSO, ... Authors: Irie, K, Oda, Y. Deposit date: 2022-10-25 Release date: 2023-07-26 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (3.4 Å) Cite: The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel. Nat Commun, 14, 2023
8HA1	Crystal structure of voltage-gated sodium channel NavAb N49K/L176G mutant in sodium ion condition Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ... Authors: Irie, K, Oda, Y. Deposit date: 2022-10-26 Release date: 2023-07-26 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (3.5 Å) Cite: The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel. Nat Commun, 14, 2023

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