Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1IRM
DownloadVisualize
BU of 1irm by Molmil
Crystal structure of apo heme oxygenase-1
Descriptor: apo heme oxygenase-1
Authors:Sugishima, M, Sakamoto, H, Kakuta, Y, Omata, Y, Hayashi, S, Noguchi, M, Fukuyama, K.
Deposit date:2001-10-09
Release date:2002-07-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of rat apo-heme oxygenase-1 (HO-1): mechanism of heme binding in HO-1 inferred from structural comparison of the apo and heme complex forms
Biochemistry, 41, 2002
1JM0
DownloadVisualize
BU of 1jm0 by Molmil
CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL
Descriptor: DIMETHYL SULFOXIDE, MANGANESE (II) ION, PROTEIN (FOUR-HELIX BUNDLE MODEL)
Authors:Di Costanzo, L, Geremia, S.
Deposit date:2001-07-17
Release date:2002-01-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Toward the de novo design of a catalytically active helix bundle: a substrate-accessible carboxylate-bridged dinuclear metal center.
J.Am.Chem.Soc., 123, 2001
1JMB
DownloadVisualize
BU of 1jmb by Molmil
CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL
Descriptor: DIMETHYL SULFOXIDE, MANGANESE (II) ION, PROTEIN (FOUR-HELIX BUNDLE MODEL)
Authors:Di Costanzo, L, Geremia, S.
Deposit date:2001-07-18
Release date:2002-01-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Toward the de novo design of a catalytically active helix bundle: a substrate-accessible carboxylate-bridged dinuclear metal center.
J.Am.Chem.Soc., 123, 2001
1JQQ
DownloadVisualize
BU of 1jqq by Molmil
Crystal structure of Pex13p(301-386) SH3 domain
Descriptor: PEROXISOMAL MEMBRANE PROTEIN PAS20
Authors:Douangamath, A, Mayans, O, Barnett, P, Distel, B, Wilmanns, M.
Deposit date:2001-08-08
Release date:2002-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Topography for Independent Binding of alpha-Helical and PPII-Helical Ligands to a Peroxisomal SH3 Domain
Mol.Cell, 10, 2002
1JJK
DownloadVisualize
BU of 1jjk by Molmil
Selenomethionine Substitution of Orotidine-5'-monophosphate Decarboxylase from E. coli Causes a Change in Crystal Contacts and Space Group
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
Authors:Poulsen, J.-C.N, Harris, P, Jensen, K.F, Larsen, S.
Deposit date:2001-07-06
Release date:2001-08-01
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Selenomethionine substitution of orotidine-5'-monophosphate decarboxylase causes a change in crystal contacts and space group.
Acta Crystallogr.,Sect.D, 57, 2001
1JSI
DownloadVisualize
BU of 1jsi by Molmil
CRYSTAL STRUCTURE OF H9 HAEMAGGLUTININ BOUND TO LSTC RECEPTOR ANALOG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ha, Y, Stevens, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:2001-08-17
Release date:2001-09-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structures of H5 avian and H9 swine influenza virus hemagglutinins bound to avian and human receptor analogs.
Proc.Natl.Acad.Sci.USA, 98, 2001
1JJW
DownloadVisualize
BU of 1jjw by Molmil
Structure of Haemophilus influenzae HslV Protein at 1.9 A Resolution
Descriptor: ATP-DEPENDENT PROTEASE HSLV, POTASSIUM ION
Authors:Sousa, M.C, McKay, D.B.
Deposit date:2001-07-09
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Haemophilus influenzae HslV protein at 1.9 A resolution, revealing a cation-binding site near the catalytic site.
Acta Crystallogr.,Sect.D, 57, 2001
1JSN
DownloadVisualize
BU of 1jsn by Molmil
STRUCTURE OF AVIAN H5 HAEMAGGLUTININ COMPLEXED WITH LSTA RECEPTRO ANALOG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ (HA1 CHAIN), ...
Authors:Ha, Y, Stevens, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:2001-08-17
Release date:2001-09-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structures of H5 avian and H9 swine influenza virus hemagglutinins bound to avian and human receptor analogs.
Proc.Natl.Acad.Sci.USA, 98, 2001
1KO1
DownloadVisualize
BU of 1ko1 by Molmil
Crystal structure of gluconate kinase
Descriptor: CHLORIDE ION, Gluconate kinase
Authors:Kraft, L, Sprenger, G.A, Lindqvist, Y.
Deposit date:2001-12-20
Release date:2002-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
J.Mol.Biol., 318, 2002
1KMK
DownloadVisualize
BU of 1kmk by Molmil
E. coli NifS/CsdB protein at 2.20A with the cysteine perselenide intermediate (residue CSZ).
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SELENOCYSTEINE, SELENOCYSTEINE LYASE
Authors:Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2001-12-16
Release date:2001-12-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Analysis of the E. coli NifS CsdB protein at 2.0 A reveals the structural basis for perselenide and persulfide intermediate formation.
J.Mol.Biol., 315, 2002
1KMJ
DownloadVisualize
BU of 1kmj by Molmil
E. coli NifS/CsdB protein at 2.0A with the cysteine persulfide intermediate (residue CSS).
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
Authors:Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2001-12-16
Release date:2001-12-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analysis of the E. coli NifS CsdB protein at 2.0 A reveals the structural basis for perselenide and persulfide intermediate formation.
J.Mol.Biol., 315, 2002
1KNQ
DownloadVisualize
BU of 1knq by Molmil
Crystal structure of gluconate kinase
Descriptor: CHLORIDE ION, Gluconate kinase
Authors:Kraft, L, Sprenger, G.A, Lindqvist, Y.
Deposit date:2001-12-19
Release date:2002-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
J.Mol.Biol., 318, 2002
1KO8
DownloadVisualize
BU of 1ko8 by Molmil
Crystal structure of gluconate kinase
Descriptor: 6-PHOSPHOGLUCONIC ACID, Gluconate kinase, MAGNESIUM ION
Authors:Kraft, L, Sprenger, G.A, Lindqvist, Y.
Deposit date:2001-12-20
Release date:2002-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
J.Mol.Biol., 318, 2002
1KSG
DownloadVisualize
BU of 1ksg by Molmil
Complex of Arl2 and PDE delta, Crystal Form 1
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNIT, ...
Authors:Hanzal-Bayer, M, Renault, L, Roversi, P, Wittinghofer, A, Hillig, R.C.
Deposit date:2002-01-13
Release date:2002-05-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The complex of Arl2-GTP and PDE delta: from structure to function.
EMBO J., 21, 2002
1KVD
DownloadVisualize
BU of 1kvd by Molmil
KILLER TOXIN FROM HALOTOLERANT YEAST
Descriptor: SMK TOXIN, SULFATE ION
Authors:Kashiwagi, T, Kunishima, N, Suzuki, C, Tsuchiya, F, Nikkuni, S, Arata, Y, Morikawa, K.
Deposit date:1996-10-04
Release date:1997-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The novel acidophilic structure of the killer toxin from halotolerant yeast demonstrates remarkable folding similarity with a fungal killer toxin.
Structure, 5, 1997
1LI4
DownloadVisualize
BU of 1li4 by Molmil
Human S-adenosylhomocysteine hydrolase complexed with neplanocin
Descriptor: 3-(6-AMINO-PURIN-9-YL)-5-HYDROXYMETHYL-CYCLOPENTANE-1,2-DIOL, ISOPROPYL ALCOHOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Yang, X, Hu, Y, Yin, D.H, Turner, M.A, Wang, M, Borchardt, R.T, Howell, P.L, Kuczera, K, Schowen, R.L.
Deposit date:2002-04-17
Release date:2003-05-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Catalytic strategy of S-adenosyl-L-homocysteine hydrolase: Transition-state stabilization and the avoidance of abortive reactions
Biochemistry, 42, 2003
1LLQ
DownloadVisualize
BU of 1llq by Molmil
Crystal Structure of Malic Enzyme from Ascaris suum Complexed with Nicotinamide Adenine Dinucleotide
Descriptor: NAD-dependent malic enzyme, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Coleman, D.E, Jagannatha, G.S, Goldsmith, E.J, Cook, P.F, Harris, B.G.
Deposit date:2002-04-29
Release date:2002-05-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the malic enzyme from Ascaris suum complexed with nicotinamide adenine dinucleotide at 2.3 A resolution.
Biochemistry, 41, 2002
1LLH
DownloadVisualize
BU of 1llh by Molmil
ARE CARBOXY TERMINII OF HELICES CODED BY THE LOCAL SEQUENCE OR BY TERTIARY STRUCTURE CONTACTS
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme
Authors:Sagermann, M, Martensson, L.-G, Baase, W.A, Matthews, B.W.
Deposit date:2002-04-28
Release date:2002-05-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A test of proposed rules for helix capping: Implications for protein design
Protein Sci., 11, 2002
1KZ8
DownloadVisualize
BU of 1kz8 by Molmil
CRYSTAL STRUCTURE OF PORCINE FRUCTOSE-1,6-BISPHOSPHATASE COMPLEXED WITH A NOVEL ALLOSTERIC-SITE INHIBITOR
Descriptor: 6-O-phosphono-beta-D-fructofuranose, ADENOSINE MONOPHOSPHATE, FRUCTOSE-1,6-BISPHOSPHATASE, ...
Authors:Wright, S.W, Carlo, A.A, Carty, M.D, Danley, D.E, Hageman, D.L, Karam, G.A, Levy, C.B, Mansour, M.N, Mathiowetz, A.M, McClure, L.D, Nestor, N.B, McPherson, R.K, Pandit, J, Pustilnik, L.R, Schulte, G.K, Soeller, W.C, Treadway, J.L, Wang, I.-K, Bauer, P.H.
Deposit date:2002-02-06
Release date:2002-10-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:ANILINOQUINAZOLINE INHIBITORS OF FRUCTOSE 1,6-BISPHOSPHATASE BIND AT A NOVEL ALLOSTERIC SITE: SYNTHESIS, IN VITRO CHARACTERIZATION, AND X-RAY CRYSTALLOGRAPHY
J.MED.CHEM., 45, 2002
1L0H
DownloadVisualize
BU of 1l0h by Molmil
CRYSTAL STRUCTURE OF BUTYRYL-ACP FROM E.COLI
Descriptor: ACYL CARRIER PROTEIN, ZINC ION
Authors:Roujeinikova, A, Baldock, C, Simon, W.J, Gilroy, J, Baker, P.J, Stuitje, A.R, Rice, D.W, Slabas, A.R, Rafferty, J.B.
Deposit date:2002-02-11
Release date:2003-02-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystallographic studies on butyryl-ACP reveal flexibility of the structure around a putative acyl chain binding site
Structure, 10, 2002
1LUD
DownloadVisualize
BU of 1lud by Molmil
SOLUTION STRUCTURE OF DIHYDROFOLATE REDUCTASE COMPLEXED WITH TRIMETHOPRIM AND NADPH, 24 STRUCTURES
Descriptor: 2,4-DIAMINO-5-(3,4,5-TRIMETHOXY-BENZYL)-PYRIMIDIN-1-IUM, DIHYDROFOLATE REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Polshakov, V.I, Smirnov, E.G, Birdsall, B, Kelly, G, Feeney, J.
Deposit date:2002-05-22
Release date:2002-12-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR-based solution structure of the complex of Lactobacillus casei dihydrofolate reductase with trimethoprim and NADPH
J.Biomol.Nmr, 24, 2002
1L7D
DownloadVisualize
BU of 1l7d by Molmil
Crystal Structure of R. rubrum Transhydrogenase Domain I without Bound NAD(H)
Descriptor: nicotinamide nucleotide Transhydrogenase, subunit alpha 1
Authors:Prasad, G.S, Wahlberg, M, Sridhar, V, Yamaguchi, M, Hatefi, Y, Stout, C.D.
Deposit date:2002-03-14
Release date:2002-11-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal Structures of Transhydrogenase Domain I with and without Bound NADH
Biochemistry, 41, 2002
1L7T
DownloadVisualize
BU of 1l7t by Molmil
Crystal Structure Analysis of the anti-testosterone Fab fragment
Descriptor: anti-testosterone (heavy chain), anti-testosterone (light chain)
Authors:Valjakka, J, Hemminki, A, Niemi, S, Soderlund, H, Takkinen, K, Rouvinen, J.
Deposit date:2002-03-17
Release date:2002-10-02
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of an in Vitro Affinity- and Specificity-matured Anti-testosterone Fab in Complex with Testosterone. IMPROVED AFFINITY RESULTS FROM SMALL STRUCTURAL CHANGES WITHIN THE VARIABLE DOMAINS
J.Biol.Chem., 277, 2002
1KFM
DownloadVisualize
BU of 1kfm by Molmil
Core side-chain packing and backbone conformation in Lpp-56 coiled-coil mutants
Descriptor: MAJOR OUTER MEMBRANE LIPOPROTEIN
Authors:Liu, J, Cao, W, Lu, M.
Deposit date:2001-11-21
Release date:2002-06-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Core side-chain packing and backbone conformation in Lpp-56 coiled-coil mutants.
J.Mol.Biol., 318, 2002
1KI4
DownloadVisualize
BU of 1ki4 by Molmil
CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH 5-BROMOTHIENYLDEOXYURIDINE
Descriptor: 5-BROMOTHIENYLDEOXYURIDINE, SULFATE ION, THYMIDINE KINASE
Authors:Champness, J.N, Bennett, M.S, Wien, F, Visse, R, Summers, W.C, Sanderson, M.R.
Deposit date:1998-05-18
Release date:1998-12-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Exploring the active site of herpes simplex virus type-1 thymidine kinase by X-ray crystallography of complexes with aciclovir and other ligands.
Proteins, 32, 1998

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon