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PDB: 176 results

1XJ2
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BU of 1xj2 by Molmil
CO-bound structure of bjFixLH
Descriptor: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, Sensor protein fixL
Authors:Key, J, Moffat, K.
Deposit date:2004-09-22
Release date:2005-03-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Deoxy and CO-Bound bjFixLH Reveal Details of Ligand Recognition and Signaling
Biochemistry, 44, 2005
5HDC
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BU of 5hdc by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 100 fs to 400 fs Structure
Descriptor: Photoactive yellow protein
Authors:Pande, K, Tenboer, J, Schmidt, M.
Deposit date:2016-01-05
Release date:2016-05-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
5HDD
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BU of 5hdd by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 800 fs to 1200 fs Structure
Descriptor: Photoactive yellow protein
Authors:Pande, K, Tenboer, J, Schmidt, M.
Deposit date:2016-01-05
Release date:2016-05-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
5HDS
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BU of 5hds by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 3 ps Structure
Descriptor: Photoactive yellow protein
Authors:Pande, K, Tenboer, J, Schmidt, M.
Deposit date:2016-01-05
Release date:2016-05-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
1Y28
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BU of 1y28 by Molmil
Crystal structure of the R220A metBJFIXL HEME domain
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Sensor protein fixL
Authors:Dunham, C.M, Dioum, E.M, Tuckerman, J.R, Gonzalez, G, Scott, W.G, Gilles-Gonzalez, M.A.
Deposit date:2004-11-21
Release date:2004-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A distal arginine in the oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure
Biochemistry, 42, 2003
5HD5
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BU of 5hd5 by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 200 ns time delay photo-activated (light) structure
Descriptor: Photoactive yellow protein
Authors:Pande, K, Tenboer, J, Schmidt, M.
Deposit date:2016-01-04
Release date:2016-05-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
2VV6
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BU of 2vv6 by Molmil
BJFIXLH IN FERRIC FORM
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SENSOR PROTEIN FIXL, ...
Authors:Ayers, R.A, Moffat, K.
Deposit date:2008-06-04
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains.
Biochemistry, 47, 2008
2W0N
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BU of 2w0n by Molmil
Plasticity of PAS domain and potential role for signal transduction in the histidine-kinase DcuS
Descriptor: SENSOR PROTEIN DCUS
Authors:Etzkorn, M, Kneuper, H, Duennwald, P, Vijayan, V, Kraemer, J, Griesinger, C, Becker, S, Unden, G, Baldus, M.
Deposit date:2008-08-19
Release date:2008-09-30
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Plasticity of the Pas Domain and a Potential Role for Signal Transduction in the Histidine Kinase Dcus.
Nat.Struct.Mol.Biol., 15, 2008
2VV8
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BU of 2vv8 by Molmil
Co-bound structure of bjFixLH
Descriptor: CARBON MONOXIDE, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ayers, R.A, Moffat, K.
Deposit date:2008-06-04
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains.
Biochemistry, 47, 2008
2VV7
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BU of 2vv7 by Molmil
BJFIXLH IN UNLIGANDED FERROUS FORM
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SENSOR PROTEIN FIXL, ...
Authors:Ayers, R.A, Moffat, K.
Deposit date:2008-06-04
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains.
Biochemistry, 47, 2008
5IU1
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BU of 5iu1 by Molmil
N-terminal PAS domain homodimer of PpANR MAP3K from Physcomitrella patens.
Descriptor: CTR1-like protein, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Stevenson, R.R, Trinh, C.H, Edwards, T.A, Cuming, A.C.
Deposit date:2016-03-17
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance.
Plant Cell, 28, 2016
8DZX
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BU of 8dzx by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100K construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Kirsh, J.M, Weaver, J.B, Boxer, S.G.
Deposit date:2022-08-08
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
8E03
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BU of 8e03 by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100D construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Kirsh, J.M, Weaver, J.B, Boxer, S.G.
Deposit date:2022-08-08
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
8E1K
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BU of 8e1k by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100Q construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Kirsh, J.M, Weaver, J.B, Boxer, S.G.
Deposit date:2022-08-10
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
8E1L
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BU of 8e1l by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100N construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Kirsh, J.M, Weaver, J.B, Boxer, S.G.
Deposit date:2022-08-10
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
8E02
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BU of 8e02 by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF T103V construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Kirsh, J.M, Weaver, J.B, Boxer, S.G.
Deposit date:2022-08-08
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
8DZY
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BU of 8dzy by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF I49T construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Weaver, J.B, Kirsh, J.M, Boxer, S.G.
Deposit date:2022-08-08
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
8E09
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BU of 8e09 by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100E construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Kirsh, J.M, Weaver, J.B, Boxer, S.G.
Deposit date:2022-08-08
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
8DZU
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BU of 8dzu by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100H construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Kirsh, J.M, Weaver, J.B, Boxer, S.G.
Deposit date:2022-08-08
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
4EW7
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BU of 4ew7 by Molmil
The crystal structure of conjugative transfer PAS_like domain from Salmonella enterica subsp. enterica serovar Typhimurium
Descriptor: ACETIC ACID, CHLORIDE ION, Conjugative transfer: regulation, ...
Authors:Wu, R, Jedrzejczak, R.P, Brown, R.N, Cort, J.R, Heffron, F, Nakayasu, E.S, Adkins, J.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
Deposit date:2012-04-26
Release date:2012-09-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The crystal structure of conjugative transfer PAS_like domain from Salmonella enterica subsp. enterica serovar Typhimurium
To be Published
4I3J
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BU of 4i3j by Molmil
Structures of PR1 intermediate of photoactive yellow protein E46Q mutant from time-resolved laue crystallography collected AT 14ID APS
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Moffat, K, Ihee, H.
Deposit date:2012-11-26
Release date:2013-03-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013
4I39
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BU of 4i39 by Molmil
Structures of ICT and PR1 intermediates from time-resolved laue crystallography collected at 14ID-B, APS
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Moffat, K, Ihee, H.
Deposit date:2012-11-26
Release date:2013-03-20
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013
4I3A
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BU of 4i3a by Molmil
Structures of PR1 and PR2 intermediates from time-resolved laue crystallography collected at 14ID-B, APS
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Moffat, K, Ihee, H.
Deposit date:2012-11-26
Release date:2013-03-20
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013
4HY8
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BU of 4hy8 by Molmil
Structures of PR1 and PR2 intermediates from time-resolved laue crystallography
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Wulff, M, Moffat, K.
Deposit date:2012-11-13
Release date:2013-03-20
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013
4I38
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BU of 4i38 by Molmil
Structures of IT intermediates from time-resolved laue crystallography collected at 14ID-B, APS
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Moffat, K, Ihee, H.
Deposit date:2012-11-26
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013

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