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PDB: 9 results
3FDT
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BU of 3fdt by Molmil
Crystal structure of the complex of human chromobox homolog 5 (CBX5) with H3K9(me)3 peptide
Descriptor: Chromobox protein homolog 5, H3K9(me)3 peptide
Authors:Amaya, M.F, Ravichandran, M, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2008-11-26
Release date:2009-01-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition and specificity determinants of the human cbx chromodomains.
J.Biol.Chem., 286, 2011
8UXQ
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BU of 8uxq by Molmil
Structure of Heterochromatin Protein 1 (HP1) alpha in complex with an H2A.Z nucleosome
Descriptor: Chromobox protein homolog 5, DNA Widom601 (208bp) strand1, DNA Widom601 (208bp) strand2, ...
Authors:Tan, D, Sokolova, V.
Deposit date:2023-11-09
Release date:2024-09-25
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Structural mechanism of HP1⍺-dependent transcriptional repression and chromatin compaction.
Structure, 32, 2024
9CMT
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BU of 9cmt by Molmil
The crystal structure of HP1alpha CSD-Agno complex
Descriptor: 3',6'-DIHYDROXY-3-OXO-3H-SPIRO[2-BENZOFURAN-1,9'-XANTHENE]-5-CARBOXYLIC ACID, Agnoprotein, Chromobox protein homolog 5
Authors:Goldgur, Y, Xie, W, Schaefer, U, Tarakhovsky, A, Patel, D, Chen, S.
Deposit date:2024-07-15
Release date:2025-05-28
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Chromatin mimicry by human JC virus.
Biorxiv, 2024
3I3C
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BU of 3i3c by Molmil
Crystal Structural of CBX5 Chromo Shadow Domain
Descriptor: Chromobox protein homolog 5, SODIUM ION
Authors:Amaya, M.F, Li, Z, Li, Y, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2009-06-30
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal Structural of CBX5 Chromo Shadow Domain
To be Published
2RVM
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BU of 2rvm by Molmil
Solution structure of the chromodomain of HP1alpha with the phosphorylated N-terminal tail
Descriptor: Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVN
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BU of 2rvn by Molmil
Solution structure of the chromodomain of HP1a with the phosphorylated N-terminal tail complexed with H3K9me3 peptide
Descriptor: 18-mer peptide of Histone H3, Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Last modified:2025-03-26
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVL
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BU of 2rvl by Molmil
Solution structure of the chromodomain of HP1alpha with the N-terminal tail
Descriptor: Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
9CDW
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BU of 9cdw by Molmil
Crystal structure of HP1alpha chromoshadow domain in complex with KAP1 peptide
Descriptor: Chromobox protein homolog 5, TRIETHYLENE GLYCOL, Transcription intermediary factor 1-beta peptide
Authors:Selvam, K, Singh, R.K, Gaurav, N, Kutateladze, T.G.
Deposit date:2024-06-25
Release date:2025-06-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The HP1 box of KAP1 organizes HP1 alpha for silencing of endogenous retroviral elements in embryonic stem cells.
Nat Commun, 16, 2025
9CEA
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BU of 9cea by Molmil
Crystal structure of HP1alpha chromoshadow domain
Descriptor: Chromobox protein homolog 5
Authors:Selvam, K, Gaurav, N, Kutateladze, T.G.
Deposit date:2024-06-26
Release date:2025-06-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The HP1 box of KAP1 organizes HP1 alpha for silencing of endogenous retroviral elements in embryonic stem cells.
Nat Commun, 16, 2025

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PDB entries from 2025-06-11

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