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PDB: 17 results

3WP9
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Crystal structure of antifreeze protein from an Antarctic sea ice bacterium Colwellia sp.
Descriptor: Ice-binding protein
Authors:Hanada, Y, Nishimiya, Y, Miura, A, Tsuda, S, Kondo, H.
Deposit date:2014-01-10
Release date:2014-07-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Hyperactive antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. has a compound ice-binding site without repetitive sequences.
Febs J., 281, 2014
6EIO
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Crystal structure of an ice binding protein from an Antarctic Biological Consortium
Descriptor: Antifreeze protein, GLYCEROL, SULFATE ION
Authors:Nardini, M, Mangiagalli, M, Nardone, V, Bar Dolev, M, Vena, V.F, Sarusi, G, Braslavsky, I, Lotti, M.
Deposit date:2017-09-19
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Structure of a bacterial ice binding protein with two faces of interaction with ice.
FEBS J., 285, 2018
5B5H
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Hydrophobic ice-binding site confer hyperactivity on antifreeze protein from a snow mold fungus
Descriptor: Antifreeze protein, SODIUM ION, SULFATE ION
Authors:Cheng, J, Hanada, Y, Miura, A, Tsuda, S, Kondo, H.
Deposit date:2016-05-06
Release date:2016-09-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Hydrophobic ice-binding sites confer hyperactivity of an antifreeze protein from a snow mold fungus.
Biochem.J., 473, 2016
6BG8
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Shewanella frigidimarina ice-binding protein_1 DUF3494 Domain
Descriptor: CHLORIDE ION, GLYCEROL, Ig domain protein, ...
Authors:Vance, T.D.R, Davies, P.L.
Deposit date:2017-10-27
Release date:2018-03-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.59712946 Å)
Cite:An ice-binding and tandem beta-sandwich domain-containing protein in Shewanella frigidimarina is a potential new type of ice adhesin.
FEBS J., 285, 2018
6A8K
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BU of 6a8k by Molmil
Crystal structure of Ice-binding Protein from a Sea-Ice Microalga
Descriptor: GLYCEROL, Ice binding protein 1
Authors:Kondo, H, Bayer-Giraldi, M.
Deposit date:2018-07-09
Release date:2018-11-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Multiple binding modes of a moderate ice-binding protein from a polar microalga
Phys Chem Chem Phys, 20, 2018
4NU3
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Crystal structure of mFfIBP, a capping head region swapped mutant of ice-binding protein
Descriptor: SODIUM ION, SULFATE ION, ice-binding protein
Authors:Do, H, Kim, S.J, Lee, S.G, Park, H, Kim, H.J, Lee, J.H.
Deposit date:2013-12-03
Release date:2014-04-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Structure-based characterization and antifreeze properties of a hyperactive ice-binding protein from the Antarctic bacterium Flavobacterium frigoris PS1
Acta Crystallogr.,Sect.D, 70, 2014
4NU2
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Crystal structure of an ice-binding protein (FfIBP) from the Antarctic bacterium, Flavobacterium frigoris PS1
Descriptor: Antifreeze protein
Authors:Do, H, Kim, S.J, Lee, S.G, Park, H, Kim, H.J, Lee, J.H.
Deposit date:2013-12-03
Release date:2014-04-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based characterization and antifreeze properties of a hyperactive ice-binding protein from the Antarctic bacterium Flavobacterium frigoris PS1
Acta Crystallogr.,Sect.D, 70, 2014
4NUH
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Crystal structure of mLeIBP, a capping head region swapped mutant of ice-binding protein
Descriptor: DI(HYDROXYETHYL)ETHER, ice-binding protein
Authors:Do, H, Kim, S.J, Lee, S.G, Park, H, Kim, H.J, Lee, J.H.
Deposit date:2013-12-03
Release date:2014-04-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Structure-based characterization and antifreeze properties of a hyperactive ice-binding protein from the Antarctic bacterium Flavobacterium frigoris PS1
Acta Crystallogr.,Sect.D, 70, 2014
3VN3
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Fungal antifreeze protein exerts hyperactivity by constructing an inequable beta-helix
Descriptor: 1,2-ETHANEDIOL, Antifreeze protein
Authors:Kondo, H, Xiao, N, Hanada, Y, Sugimoto, H, Hoshino, T, Garnham, C.P, Davies, P.L, Tsuda, S.
Deposit date:2011-12-21
Release date:2012-06-06
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Ice-binding site of snow mold fungus antifreeze protein deviates from structural regularity and high conservation
Proc.Natl.Acad.Sci.USA, 109, 2012
3UYV
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Crystal structure of a glycosylated ice-binding protein (LeIBP) from Arctic yeast
Descriptor: Antifreeze protein, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Lee, J.H, Park, A.K, Do, H, Park, K.S, Moh, S.H, Chi, Y.M, Kim, H.J.
Deposit date:2011-12-06
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural basis for the antifreeze activity of an ice-binding protein from an Arctic yeast.
J.Biol.Chem., 2012
3UYU
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Structural basis for the antifreeze activity of an ice-binding protein (LeIBP) from Arctic yeast
Descriptor: Antifreeze protein, GLYCEROL
Authors:Lee, J.H, Park, A.K, Do, H, Park, K.S, Moh, S.H, Chi, Y.M, Kim, H.J.
Deposit date:2011-12-06
Release date:2012-02-15
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural basis for the antifreeze activity of an ice-binding protein from an Arctic yeast.
J.Biol.Chem., 2012
7BWY
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Crystal structure of ice-binding protein from an Antarctic ascomycete, Antarctomyces psychrotrophicus.
Descriptor: GLYCEROL, Ice-binding protein isoform1a
Authors:Yamauchi, A, Arai, T, Kondo, H, Tsuda, S.
Deposit date:2020-04-16
Release date:2020-05-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes.
Biomolecules, 10, 2020
7BWX
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BU of 7bwx by Molmil
Crystal structure of ice-binding protein from an Antarctic ascomycete, Antarctomyces psychrotrophicus.
Descriptor: GLYCEROL, Ice-binding protein isoform1a, SULFATE ION
Authors:Yamauchi, A, Arai, T, Kondo, H, Tsuda, S.
Deposit date:2020-04-16
Release date:2020-05-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes.
Biomolecules, 10, 2020
7DC5
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Crystal structure of fungal antifreeze protein with intermediate activity
Descriptor: Antifreeze protein, SULFATE ION
Authors:Khan, N.M.M.U, Arai, T, Tsuda, S, Kondo, H.
Deposit date:2020-10-23
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Characterization of microbial antifreeze protein with intermediate activity suggests that a bound-water network is essential for hyperactivity.
Sci Rep, 11, 2021
7DDB
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Crystal structure of fungal antifreeze protein with intermediate activity
Descriptor: Antifreeze protein, MAGNESIUM ION
Authors:Khan, N.M.M.U, Arai, T, Tsuda, S, Kondo, H.
Deposit date:2020-10-28
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Characterization of microbial antifreeze protein with intermediate activity suggests that a bound-water network is essential for hyperactivity.
Sci Rep, 11, 2021
7EHK
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BU of 7ehk by Molmil
Crystal structure of C107S mutant of FfIBP
Descriptor: CHLORIDE ION, Ice-binding protein
Authors:Do, H, Lee, J.H.
Deposit date:2021-03-29
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Importance of rigidity of ice-binding protein (FfIBP) for hyperthermal hysteresis activity and microbial survival.
Int.J.Biol.Macromol., 204, 2022
5UYT
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Crystal structure of ice binding protein from an Antarctic bacterium Flavobacteriaceae
Descriptor: Ice-binding protein, NITRATE ION
Authors:Wang, C, Pakhomova, S, Newcomer, M.E, Christner, B.C, Luo, B.-H.
Deposit date:2017-02-24
Release date:2017-10-25
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of antifreeze activity of a bacterial multi-domain antifreeze protein.
PLoS ONE, 12, 2017

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