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PDB: 161 results

4XQ3
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Crystal structure of Sso-SmAP2
Descriptor: Like-Sm ribonucleoprotein core
Authors:Bezerra, G.A, Martens, B, Kreuter, M.J, Grishkovskaya, I, Manica, M, Arkhipova, V, Blasi, U, Djinovic-Carugo, K.
Deposit date:2015-01-18
Release date:2015-04-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Heptameric SmAP1 and SmAP2 Proteins of the Crenarchaeon Sulfolobus Solfataricus Bind to Common and Distinct RNA Targets.
Life, 5, 2015
3SWN
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Structure of the LSm657 Complex: An Assembly Intermediate of the LSm1 7 and LSm2 8 Rings
Descriptor: U6 snRNA-associated Sm-like protein LSm5, U6 snRNA-associated Sm-like protein LSm6, U6 snRNA-associated Sm-like protein LSm7, ...
Authors:Mund, M, Neu, A, Ullmann, J.L, Neu, U, Sprangers, R.
Deposit date:2011-07-14
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the LSm657 complex: an assembly intermediate of the LSm1-7 and LSm2-8 rings.
J.Mol.Biol., 414, 2011
4WZJ
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BU of 4wzj by Molmil
Spliceosomal U4 snRNP core domain
Descriptor: Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein G, ...
Authors:Leung, A.K.W, Nagai, K, Li, J.
Deposit date:2014-11-19
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of the spliceosomal U4 snRNP core domain and its implication for snRNP biogenesis.
Nature, 473, 2011
6TFL
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Lsm protein (SmAP) from Halobacterium salinarum
Descriptor: CALCIUM ION, GLYCEROL, RNA-binding protein Lsm, ...
Authors:Nikulin, A.D, Fando, M.S, Lekontseva, N.V.
Deposit date:2019-11-14
Release date:2020-11-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Structure and RNA-Binding Properties of Lsm Protein from Halobacterium salinarum.
Biochemistry Mosc., 86, 2021
1TH7
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Crystal Structure of an Archaeal Sm Protein from Sulfolobus solfataricus
Descriptor: Small nuclear riboprotein protein
Authors:Kilic, T, Suck, D.
Deposit date:2004-06-01
Release date:2005-06-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of an archaeal Sm protein from Sulfolobus solfataricus
Proteins, 61, 2005
1H64
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CRYSTAL STRUCTURE OF THE SM-RELATED PROTEIN OF P. ABYSSI: THE BIOLOGICAL UNIT IS A HEPTAMER
Descriptor: SNRNP SM-LIKE PROTEIN
Authors:Mayer, C, Weeks, S, Suck, D.
Deposit date:2001-06-05
Release date:2002-12-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of the Pyrococcus Abyssi Sm Core and its Complex with RNA.Common Features of RNA Binding in Archaea and Eukarya
J.Biol.Chem., 278, 2003
3BW1
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BU of 3bw1 by Molmil
Crystal structure of homomeric yeast Lsm3 exhibiting novel octameric ring organisation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, SULFATE ION, U6 snRNA-associated Sm-like protein LSm3
Authors:Naidoo, N, Harrop, S.J, Curmi, P.M.G, Mabbutt, B.C.
Deposit date:2008-01-07
Release date:2008-03-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Lsm3 octamer from Saccharomyces cerevisiae: implications for Lsm ring organisation and recruitment
J.Mol.Biol., 377, 2008
4EMK
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Crystal structure of SpLsm5/6/7
Descriptor: U6 snRNA-associated Sm-like protein LSm5, U6 snRNA-associated Sm-like protein LSm6, U6 snRNA-associated Sm-like protein LSm7
Authors:Jiang, S.M, Wu, D.H, Song, H.W.
Deposit date:2012-04-12
Release date:2012-06-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe.
Plos One, 7, 2012
4EMH
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Crystal structure of SpLsm4
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm4
Authors:Jiang, S.M, Wu, D.H, Song, H.W.
Deposit date:2012-04-12
Release date:2012-06-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe.
Plos One, 7, 2012
1N9R
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Crystal structure of a heptameric ring complex of yeast SmF in spacegroup P4122
Descriptor: Small nuclear ribonucleoprotein F
Authors:Collins, B.M, Cubeddu, L, Naidoo, N, Harrop, S.J, Kornfeld, G.D, Dawes, I.W, Curmi, P.M.G, Mabbutt, B.C.
Deposit date:2002-11-26
Release date:2002-12-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Homomeric ring assemblies of eukaryotic Sm proteins have affinity for both RNA and DNA: Crystal structure of an oligomeric complex of yeast SmF
J.Biol.Chem., 278, 2003
1B34
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CRYSTAL STRUCTURE OF THE D1D2 SUB-COMPLEX FROM THE HUMAN SNRNP CORE DOMAIN
Descriptor: PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1), PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2)
Authors:Walke, S, Young, R.J, Kambach, C, Avis, J.M, De La Fortelle, E, Li, J, Nagai, K.
Deposit date:1998-12-17
Release date:2000-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs.
Cell(Cambridge,Mass.), 96, 1999
4EMG
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Crystal structure of SpLsm3
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm3
Authors:Jiang, S.M, Wu, D.H, Song, H.W.
Deposit date:2012-04-12
Release date:2012-06-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe.
Plos One, 7, 2012
3PGG
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BU of 3pgg by Molmil
Crystal structure of cryptosporidium parvum u6 snrna-associated sm-like protein lsm5
Descriptor: U6 snRNA-associated Sm-like protein LSm5. SM domain
Authors:Dong, A, Gao, M, Zhao, Y, Lew, J, Wasney, G.A, Kozieradzki, I, Vedadi, M, Edwards, A, Arrowsmith, C, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Artz, J, Structural Genomics Consortium (SGC)
Deposit date:2010-11-01
Release date:2011-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Genome-Scale Protein Expression and Structural Biology of Plasmodium Falciparum and Related Apicomplexan Organisms.
Mol.Biochem.Parasitol., 151, 2007
1D3B
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CRYSTAL STRUCTURE OF THE D3B SUBCOMPLEX OF THE HUMAN CORE SNRNP DOMAIN AT 2.0A RESOLUTION
Descriptor: CITRIC ACID, GLYCEROL, PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B), ...
Authors:Kambach, C, Walke, S, Avis, J.M, De La Fortelle, E, Li, J, Nagai, K.
Deposit date:1998-12-22
Release date:1999-12-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs.
Cell(Cambridge,Mass.), 96, 1999
4C92
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Crystal structure of the yeast Lsm1-7 complex
Descriptor: SM-LIKE PROTEIN LSM1, U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM2, U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3, ...
Authors:Sharif, H, Conti, E.
Deposit date:2013-10-02
Release date:2013-10-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Architecture of the Lsm1-7-Pat1 Complex: A Conserved Assembly in Eukaryotic Mrna Turnover
Cell Rep., 5, 2013
1N9S
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BU of 1n9s by Molmil
Crystal structure of yeast SmF in spacegroup P43212
Descriptor: Small nuclear ribonucleoprotein F
Authors:Collins, B.M, Cubeddu, L, Naidoo, N, Harrop, S.J, Kornfeld, G.D, Dawes, I.W, Curmi, P.M.G, Mabbutt, B.C.
Deposit date:2002-11-26
Release date:2002-12-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Homomeric ring assemblies of eukaryotic Sm proteins have affinity for both RNA and DNA: Crystal structure of an oligomeric complex of yeast SmF
J.Biol.Chem., 278, 2003
1I5L
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BU of 1i5l by Molmil
CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNA
Descriptor: 5'-R(*UP*UP*U)-3', PUTATIVE SNRNP SM-LIKE PROTEIN AF-SM1, URIDINE
Authors:Toro, I, Thore, S, Mayer, C, Basquin, J, Seraphin, B, Suck, D.
Deposit date:2001-02-28
Release date:2001-08-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex.
EMBO J., 20, 2001
1I81
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BU of 1i81 by Molmil
CRYSTAL STRUCTURE OF A HEPTAMERIC LSM PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
Descriptor: PUTATIVE SNRNP SM-LIKE PROTEIN
Authors:Collins, B.M, Harrop, S.J, Kornfeld, G.D, Dawes, I.W, Curmi, P.M.G, Mabbutt, B.C.
Deposit date:2001-03-12
Release date:2001-03-28
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a heptameric Sm-like protein complex from archaea: implications for the structure and evolution of snRNPs.
J.Mol.Biol., 309, 2001
1I8F
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THE CRYSTAL STRUCTURE OF A HEPTAMERIC ARCHAEAL SM PROTEIN: IMPLICATIONS FOR THE EUKARYOTIC SNRNP CORE
Descriptor: GLYCEROL, PUTATIVE SNRNP SM-LIKE PROTEIN
Authors:Mura, C, Cascio, D, Sawaya, M.R, Eisenberg, D.
Deposit date:2001-03-14
Release date:2001-05-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core.
Proc.Natl.Acad.Sci.USA, 98, 2001
4M75
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BU of 4m75 by Molmil
Crystal structure of Lsm1-7 complex
Descriptor: CHLORIDE ION, U6 snRNA-associated Sm-like protein Lsm1, U6 snRNA-associated Sm-like protein Lsm2, ...
Authors:Zhou, L, Hang, J, Zhou, Y, Wan, R, Lu, G, Yan, C, Shi, Y.
Deposit date:2013-08-12
Release date:2013-10-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structures of the Lsm complex bound to the 3' end sequence of U6 small nuclear RNA.
Nature, 506, 2014
4M7D
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BU of 4m7d by Molmil
Crystal structure of Lsm2-8 complex bound to the RNA fragment CGUUU
Descriptor: U6 snRNA, U6 snRNA-associated Sm-like protein LSm2, U6 snRNA-associated Sm-like protein LSm3, ...
Authors:Zhou, L, Hang, J, Zhou, Y, Wan, R, Lu, G, Yan, C, Shi, Y.
Deposit date:2013-08-12
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.595 Å)
Cite:Crystal structures of the Lsm complex bound to the 3' end sequence of U6 small nuclear RNA.
Nature, 506, 2014
4M7A
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BU of 4m7a by Molmil
Crystal structure of Lsm2-8 complex bound to the 3' end sequence of U6 snRNA
Descriptor: U6 snRNA, U6 snRNA-associated Sm-like protein LSm2, U6 snRNA-associated Sm-like protein LSm3, ...
Authors:Zhou, L, Hang, J, Zhou, Y, Wan, R, Lu, G, Yan, C, Shi, Y.
Deposit date:2013-08-12
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.781 Å)
Cite:Crystal structures of the Lsm complex bound to the 3' end sequence of U6 small nuclear RNA.
Nature, 506, 2014
4M77
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Crystal structure of Lsm2-8 complex, space group I212121
Descriptor: U6 snRNA-associated Sm-like protein LSm2, U6 snRNA-associated Sm-like protein LSm3, U6 snRNA-associated Sm-like protein LSm4, ...
Authors:Zhou, L, Hang, J, Zhou, Y, Wan, R, Lu, G, Yan, C, Shi, Y.
Deposit date:2013-08-12
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.111 Å)
Cite:Crystal structures of the Lsm complex bound to the 3' end sequence of U6 small nuclear RNA.
Nature, 506, 2014
4M78
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Crystal structure of Lsm2-8 complex, space group P21
Descriptor: U6 snRNA-associated Sm-like protein LSm2, U6 snRNA-associated Sm-like protein LSm3, U6 snRNA-associated Sm-like protein LSm4, ...
Authors:Zhou, L, Hang, J, Zhou, Y, Wan, R, Lu, G, Yan, C, Shi, Y.
Deposit date:2013-08-12
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.794 Å)
Cite:Crystal structures of the Lsm complex bound to the 3' end sequence of U6 small nuclear RNA.
Nature, 506, 2014
6PPN
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Structure of S. pombe Lsm2-8 with unprocessed U6 snRNA
Descriptor: Mimic of unprocessed U6 snRNA, Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, ...
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2019-07-08
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes.
Rna, 26, 2020

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