Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 207 results

3ZHI
DownloadVisualize
BU of 3zhi by Molmil
N-terminal domain of the CI repressor from bacteriophage TP901-1
Descriptor: CI
Authors:Frandsen, K.H, Rasmussen, K.K, Poulsen, J.N, Lo Leggio, L.
Deposit date:2012-12-21
Release date:2013-12-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Binding of the N-Terminal Domain of the Lactococcal Bacteriophage Tp901-1 Ci Repressor to its Target DNA: A Crystallography, Small Angle Scattering, and Nuclear Magnetic Resonance Study.
Biochemistry, 52, 2013
8QAO
DownloadVisualize
BU of 8qao by Molmil
Crystal structure of TP901-1 CI-NTD89 repressor N-terminal domain
Descriptor: CI
Authors:Huang, Z, Hamad, G.M, Lo Leggio, L, Varming, A.K.
Deposit date:2023-08-23
Release date:2024-02-28
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:CI:Mor interactions in the lysogeny switches of Lactococcus lactis TP901-1 and Staphylococcus aureus phi 13 bacteriophages.
Microbiome Res Rep, 3, 2024
3JXD
DownloadVisualize
BU of 3jxd by Molmil
Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C in the presence of Rb+
Descriptor: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', RUBIDIUM ION, Repressor protein C2
Authors:Watkins, D, Koudelka, G.B, Williams, L.D.
Deposit date:2009-09-18
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Sequence Recognition of DNA by Protein-Induced Conformational Transitions.
J.Mol.Biol., 396, 2010
1PRA
DownloadVisualize
BU of 1pra by Molmil
DETERMINATION OF THE NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN (RESIDUES 1 TO 69) OF THE 434 REPRESSOR AND COMPARISON WITH THE X-RAY CRYSTAL STRUCTURE
Descriptor: 434 REPRESSOR
Authors:Neri, D, Billeter, M, Wuthrich, K.
Deposit date:1991-11-18
Release date:1993-10-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Determination of the nuclear magnetic resonance solution structure of the DNA-binding domain (residues 1 to 69) of the 434 repressor and comparison with the X-ray crystal structure.
J.Mol.Biol., 223, 1992
2KPJ
DownloadVisualize
BU of 2kpj by Molmil
Solution Structure Of Protein SOS-response transcriptional repressor, LexA From Eubacterium rectale. Northeast Structural Genomics Consortium Target ErR9A
Descriptor: SOS-response transcriptional repressor, LexA
Authors:Wu, Y, Eletsky, A, Lee, D, Ghosh, A, Buchwald, W, Zhang, Q, Janjua, H, Garcia, E, Nair, R, Sukumaran, D, Rost, B, Acton, T, Xiao, R, Everett, J, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-10-16
Release date:2009-11-17
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution Structure Of Protein SOS-response transcriptional repressor, LexA From Eubacterium rectale. Northeast Structural Genomics Consortium Target ErR9A
To be Published
7T8I
DownloadVisualize
BU of 7t8i by Molmil
Crystal structure of the ImmR transcriptional regulator DNA-binding domain of Bacillus subtilis
Descriptor: Phage element (ICEBs1)transcriptional regulator (Xre family)
Authors:Caliandro, R, de Diego, I, Gomis-Ruth, F.X.
Deposit date:2021-12-16
Release date:2022-03-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure report of the ImmR transcriptional regulator DNA-binding domain of the Bacillus subtilis ICEBs1 transposon.
Sci Rep, 12, 2022
5TN0
DownloadVisualize
BU of 5tn0 by Molmil
Solution Structure of the N-terminal DNA-binding domain of the master biofilm-regulator SinR from Bacillus subtilis
Descriptor: HTH-type transcriptional regulator SinR
Authors:Draughn, G.L, Bobay, B.G, Stowe, S.D, Thompson, R.J, Cavanagh, J.
Deposit date:2016-10-13
Release date:2017-10-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Solution Structures and Interaction of SinR and SinI: Elucidating the Mechanism of Action of the Master Regulator Switch for Biofilm Formation in Bacillus subtilis.
J.Mol.Biol., 2019
1LLI
DownloadVisualize
BU of 1lli by Molmil
THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING
Descriptor: DNA (5'-D(*AP*AP*TP*AP*CP*CP*AP*CP*TP*GP*GP*CP*GP*GP*TP*GP*A P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*TP*CP*AP*CP*CP*GP*CP*CP*AP*GP*TP*GP*G P*TP*AP*T)-3'), PROTEIN (LAMBDA REPRESSOR)
Authors:Lim, W.A, Hodel, A, Sauer, R.T, Richards, F.M.
Deposit date:1994-03-25
Release date:1994-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of a mutant protein with altered but improved hydrophobic core packing.
Proc.Natl.Acad.Sci.USA, 91, 1994
8BNY
DownloadVisualize
BU of 8bny by Molmil
Structure of the tetramerization domain of pLS20 conjugation repressor Rco
Descriptor: CHLORIDE ION, Immunity repressor protein
Authors:Bernardo, N, Crespo, I, Meijer, W.J.J, Boer, D.R.
Deposit date:2022-11-14
Release date:2023-04-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.429 Å)
Cite:A tetramerization domain in prokaryotic and eukaryotic transcription regulators homologous to p53.
Acta Crystallogr D Struct Biol, 79, 2023
8DTQ
DownloadVisualize
BU of 8dtq by Molmil
Crystal Structure of Staphylococcus aureus pSK41 Cop
Descriptor: CHLORIDE ION, Helix-turn-helix domain, SODIUM ION
Authors:Walton, W.G, Eakes, T.C, Redinbo, M.R, McLaughlin, K.J.
Deposit date:2022-07-26
Release date:2023-08-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:pSK41/pGO1-family conjugative plasmids of Staphylococcus aureus encode a cryptic repressor of replication.
Plasmid, 128, 2023
1ADR
DownloadVisualize
BU of 1adr by Molmil
DETERMINATION OF THE NUCLEAR MAGNETIC RESONANCE STRUCTURE OF THE DNA-BINDING DOMAIN OF THE P22 C2 REPRESSOR (1-76) IN SOLUTION AND COMPARISON WITH THE DNA-BINDING DOMAIN OF THE 434 REPRESSOR
Descriptor: P22 C2 REPRESSOR
Authors:Sevillasierra, P, Otting, G, Wuthrich, K.
Deposit date:1993-07-19
Release date:1994-01-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Determination of the nuclear magnetic resonance structure of the DNA-binding domain of the P22 c2 repressor (1 to 76) in solution and comparison with the DNA-binding domain of the 434 repressor.
J.Mol.Biol., 235, 1994
8EZT
DownloadVisualize
BU of 8ezt by Molmil
Crystal structure of HipB(Lp) from Legionella pneumophila
Descriptor: CHLORIDE ION, HipB(Lp)
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Lin, J, Ensminger, A, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-11-01
Release date:2023-09-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal structure of HipB(Lp) from Legionella pneumophila
To Be Published
7ZVI
DownloadVisualize
BU of 7zvi by Molmil
Non-canonical Staphylococcus aureus pathogenicity island repression
Descriptor: Orf22, Sri
Authors:Miguel-Romero, L, Alqasmi, M, Bacarizo, J, Marina, A, Penades, J.R.
Deposit date:2022-05-16
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.973 Å)
Cite:Non-canonical Staphylococcus aureus pathogenicity island repression.
Nucleic Acids Res., 50, 2022
1LMB
DownloadVisualize
BU of 1lmb by Molmil
REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR-OPERATOR COMPLEX
Descriptor: DNA (5'-D(*AP*AP*TP*AP*CP*CP*AP*CP*TP*GP*GP*CP*GP*GP*TP*GP*A P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*TP*CP*AP*CP*CP*GP*CP*CP*AP*GP*TP*GP*G P*TP*AP*T)-3'), PROTEIN (LAMBDA REPRESSOR)
Authors:Beamer, L.J, Pabo, C.O.
Deposit date:1991-11-05
Release date:1991-11-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Refined 1.8 A crystal structure of the lambda repressor-operator complex.
J.Mol.Biol., 227, 1992
1LRP
DownloadVisualize
BU of 1lrp by Molmil
COMPARISON OF THE STRUCTURES OF CRO AND LAMBDA REPRESSOR PROTEINS FROM BACTERIOPHAGE LAMBDA
Descriptor: LAMBDA REPRESSOR
Authors:Pabo, C, Lewis, M.
Deposit date:1987-12-04
Release date:1989-01-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Comparison of the structures of cro and lambda repressor proteins from bacteriophage lambda.
J.Mol.Biol., 169, 1983
6CHV
DownloadVisualize
BU of 6chv by Molmil
Proteus vulgaris HigA antitoxin bound to DNA
Descriptor: Antitoxin HigA, MAGNESIUM ION, pHigCryst3, ...
Authors:Schureck, M.A, Hoffer, E.D, Onuoha, N, Dunham, C.M.
Deposit date:2018-02-23
Release date:2019-02-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of transcriptional regulation by the HigA antitoxin.
Mol.Microbiol., 111, 2019
7P4A
DownloadVisualize
BU of 7p4a by Molmil
Non-canonical Staphylococcus aureus pathogenicity island repression.
Descriptor: Sri, Stl
Authors:Miguel-Romero, L, Alqasmi, M, Bacarizo, J, Tan, J.A, Cogdell, R.J, Chen, J, Byron, O, Christie, G.E, Marina, A, Penades, J.R.
Deposit date:2021-07-10
Release date:2022-07-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Non-canonical Staphylococcus aureus pathogenicity island repression.
Nucleic Acids Res., 50, 2022
7N10
DownloadVisualize
BU of 7n10 by Molmil
Co-crystal structure of Prx with ComR DNA binding domain
Descriptor: ComR, Prx
Authors:Rutbeek, N.R, Prehna, G.
Deposit date:2021-05-26
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular mechanism of quorum sensing inhibition in Streptococcus by the phage protein paratox.
J.Biol.Chem., 297, 2021
1ZUG
DownloadVisualize
BU of 1zug by Molmil
STRUCTURE OF PHAGE 434 CRO PROTEIN, NMR, 20 STRUCTURES
Descriptor: PHAGE 434 CRO PROTEIN
Authors:Padmanabhan, S, Jimenez, M.A, Gonzalez, C, Sanz, J.M, Gimenez-Gallego, G, Rico, M.
Deposit date:1997-03-14
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional solution structure and stability of phage 434 Cro protein.
Biochemistry, 36, 1997
7N1N
DownloadVisualize
BU of 7n1n by Molmil
Prx in complex with ComR DNA-binding domain
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ComR, Prx
Authors:Rutbeek, N.R, Prehna, G.
Deposit date:2021-05-27
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular mechanism of quorum sensing inhibition in Streptococcus by the phage protein paratox.
J.Biol.Chem., 297, 2021
5WOQ
DownloadVisualize
BU of 5woq by Molmil
Crystal structure of an XRE family protein transcriptional regulator from Mycobacterium smegmatis
Descriptor: Transcriptional regulator ClgR
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-08-02
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of an XRE family protein transcriptional regulator from Mycobacterium smegmatis
To Be Published
6CF1
DownloadVisualize
BU of 6cf1 by Molmil
Proteus vulgaris HigA antitoxin structure
Descriptor: Antitoxin HigA, POTASSIUM ION
Authors:Schureck, M.A, Hoffer, E.D, Ei Cho, S, Dunham, C.M.
Deposit date:2018-02-13
Release date:2019-02-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of transcriptional regulation by the HigA antitoxin.
Mol.Microbiol., 111, 2019
1PER
DownloadVisualize
BU of 1per by Molmil
THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES
Descriptor: DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*GP*TP*TP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*AP*AP*CP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 REPRESSOR)
Authors:Rodgers, D.W, Harrison, S.C.
Deposit date:1993-11-09
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The complex between phage 434 repressor DNA-binding domain and operator site OR3: structural differences between consensus and non-consensus half-sites.
Structure, 1, 1993
4YG1
DownloadVisualize
BU of 4yg1 by Molmil
HipB-O1-O2 complex/P21212 crystal form
Descriptor: Antitoxin HipB, DNA (48-MER)
Authors:Schumacher, M.A.
Deposit date:2015-02-25
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
1X57
DownloadVisualize
BU of 1x57 by Molmil
Solution structures of the HTH domain of human EDF-1 protein
Descriptor: Endothelial differentiation-related factor 1
Authors:Nameki, N, Sato, M, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-15
Release date:2005-11-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the HTH domain of human EDF-1 protein
To be Published

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon