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PDB: 876 results

6V51
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Spin-labeled T4 Lysozyme (9/131FnbY)-(4-Amino-TEMPO)
Descriptor: 4-amino-2,2,6,6-tetramethylpiperidin-1-ol, Endolysin
Authors:Liu, J, Morizumi, T, Ou, W.L, Wang, L, Ernst, O.P.
Deposit date:2019-12-02
Release date:2020-10-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Genetically Encoded Quinone Methides Enabling Rapid, Site-Specific, and Photocontrolled Protein Modification with Amine Reagents.
J.Am.Chem.Soc., 142, 2020
4W55
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T4 Lysozyme L99A with n-Propylbenzene Bound
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Endolysin, propylbenzene
Authors:Merski, M, Shoichet, B.K, Eidam, O, Fischer, M.
Deposit date:2014-08-16
Release date:2015-04-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6401 Å)
Cite:Homologous ligands accommodated by discrete conformations of a buried cavity.
Proc.Natl.Acad.Sci.USA, 112, 2015
4W58
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T4 Lysozyme L99A with n-Pentylbenzene Bound
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Endolysin, pentylbenzene
Authors:Merski, M, Shoichet, B.K, Eidam, O, Fischer, M.
Deposit date:2014-08-16
Release date:2015-04-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Homologous ligands accommodated by discrete conformations of a buried cavity.
Proc.Natl.Acad.Sci.USA, 112, 2015
3FI5
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Crystal Structure of T4 Lysozyme Mutant R96W
Descriptor: CHLORIDE ION, ISOPROPYL ALCOHOL, Lysozyme, ...
Authors:Mooers, B.H.M, Matthews, B.W.
Deposit date:2008-12-11
Release date:2009-02-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme.
Protein Sci., 18, 2009
3F9L
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Evaulaution at Atomic Resolution of the Role of Strain in Destabilizing the Temperature Sensitive T4 Lysozyme Mutant Arg96-->His
Descriptor: CHLORIDE ION, Lysozyme, PHOSPHATE ION, ...
Authors:Mooers, B.H.M, Matthews, B.W.
Deposit date:2008-11-14
Release date:2009-02-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Evaluation at atomic resolution of the role of strain in destabilizing the temperature-sensitive T4 lysozyme mutant Arg 96 --> His.
Protein Sci., 18, 2009
5G27
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BU of 5g27 by Molmil
Structure of Spin-labelled T4 lysozyme mutant L118C-R1 at Room Temperature
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, ENDOLYSIN, ...
Authors:Gohlke, U, Consentius, P, Loll, B, Mueller, R, Kaupp, M, Heinemann, U, Risse, T.
Deposit date:2016-04-07
Release date:2016-11-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Tracking Transient Conformational States of T4 Lysozyme at Room Temperature Combining X-Ray Crystallography and Site-Directed Spin Labeling.
J.Am.Chem.Soc., 138, 2016
5XPF
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BU of 5xpf by Molmil
High-resolution X-ray structure of the T26H mutant of T4 lysozyme
Descriptor: CHLORIDE ION, Endolysin, GLYCEROL, ...
Authors:Hiromoto, T, Kuroki, R.
Deposit date:2017-06-01
Release date:2017-10-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Neutron structure of the T26H mutant of T4 phage lysozyme provides insight into the catalytic activity of the mutant enzyme and how it differs from that of wild type.
Protein Sci., 26, 2017
9KBQ
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Crystal structure of PHAb10, a peptidoglycan hydrolase with thermal stability and broad-spectrum
Descriptor: Lysozyme
Authors:Hu, F.
Deposit date:2024-10-31
Release date:2024-11-27
Last modified:2025-06-11
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Dimer-monomer transition defines a hyper-thermostable peptidoglycan hydrolase mined from bacterial proteome by lysin-derived antimicrobial peptide-primed screening
Elife, 13, 2024
9KBS
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Crystal structure of PHAb11, another peptidoglycan hydrolase with thermal stability and broad-spectrum
Descriptor: GLYCEROL, Lysozyme
Authors:Hu, F.
Deposit date:2024-10-31
Release date:2024-11-27
Last modified:2025-06-11
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Dimer-monomer transition defines a hyper-thermostable peptidoglycan hydrolase mined from bacterial proteome by lysin-derived antimicrobial peptide-primed screening
Elife, 13, 2024
4E97
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T4 Lysozyme L99A/M102H with 2-Mercaptoethanol Bound
Descriptor: 2-HYDROXYETHYL DISULFIDE, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Merski, M, Shoichet, B.K.
Deposit date:2012-03-20
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Engineering a model protein cavity to catalyze the Kemp elimination.
Proc.Natl.Acad.Sci.USA, 109, 2012
4S0W
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BU of 4s0w by Molmil
Wild type T4 lysozyme structure
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ...
Authors:Snell, E.H, Snell, M.E.
Deposit date:2015-01-07
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.117 Å)
Cite:Wild type T4 lysozyme structure
To be Published
8F11
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T4 lysozyme with a 2,6-diazaadamantane nitroxide (DZD) spin label
Descriptor: 1-[(1r,3r,5r,7r)-6-hydroxy-2,6-diazatricyclo[3.3.1.1~3,7~]decan-2-yl]ethan-1-one, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Wilson, M.A, Madzelan, P, Rajca, A, Stein, R, Yang, Z.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Cucurbit[7]uril Enhances Distance Measurements of Spin-Labeled Proteins.
J.Am.Chem.Soc., 145, 2023
6H9D
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BU of 6h9d by Molmil
Muramidase domain of SpmX from Asticaccaulis excentricus
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme
Authors:Randich, A.M, Morlot, C.M, Brun, Y.V.
Deposit date:2018-08-03
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Origin of a Core Bacterial Gene via Co-option and Detoxification of a Phage Lysin.
Curr.Biol., 29, 2019
5NX0
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BU of 5nx0 by Molmil
Structure of Spin-labelled T4 lysozyme mutant L115C-R119C-R1 at room temperature
Descriptor: Endolysin
Authors:Gohlke, U, Loll, B, Consentius, P, Mueller, R, Kaupp, M, Heinemann, U, Wahl, M.C, Risse, T.
Deposit date:2017-05-09
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Combining EPR spectroscopy and X-ray crystallography to elucidate the structure and dynamics of conformationally constrained spin labels in T4 lysozyme single crystals.
Phys Chem Chem Phys, 19, 2017
7SJ6
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T4 Lysozyme L99A/M102H with 1,2-Azaborine bound
Descriptor: 1,2-dihydro-1,2-azaborinine, 2-HYDROXYETHYL DISULFIDE, ACETATE ION, ...
Authors:Yao, L, Wirth, J.
Deposit date:2021-10-16
Release date:2022-10-26
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:T4 Lysozyme L99A/M102H with 1,2-Azaborine bound
to be published
7MWY
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BU of 7mwy by Molmil
Structure of the drosophila STING cyclic dinucleotide binding domain
Descriptor: STING
Authors:Slavik, K.M, Ragucci, A.E, Kranzusch, P.J.
Deposit date:2021-05-17
Release date:2021-07-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:cGAS-like receptors sense RNA and control 3'2'-cGAMP signalling in Drosophila.
Nature, 597, 2021
7MWZ
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BU of 7mwz by Molmil
Structure of drosophila STING in complex with 3'2'-cGAMP
Descriptor: 3'2'-cGAMP, STING
Authors:Slavik, K.M, Ragucci, A.E, Kranzusch, P.J.
Deposit date:2021-05-17
Release date:2021-07-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:cGAS-like receptors sense RNA and control 3'2'-cGAMP signalling in Drosophila.
Nature, 597, 2021
8TAT
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BU of 8tat by Molmil
CRYSTAL STRUCTURE OF R9A SPIN LABELED T4 LYSOZYME MUTANT K65R9A/R76R9A
Descriptor: Endolysin, methyl 4-fluoro-1-hydroxy-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrole-3-carboxylate, radical
Authors:Chen, M, Hubbell, W.L, Cascio, D.
Deposit date:2023-06-27
Release date:2024-06-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Highly Ordered Nitroxide Side Chain for Distance Mapping and Monitoring Slow Structural Fluctuations in Proteins.
Appl.Magn.Reson., 55, 2024
6U0F
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Neutron crystal structure of T4L L99AE
Descriptor: CHLORIDE ION, Endolysin
Authors:Cuneo, M.J, Myles, D.A, Li, L.
Deposit date:2019-08-14
Release date:2020-08-19
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (2.053 Å), X-RAY DIFFRACTION
Cite:Solvent entry into cavities of T4 lysozyme.
To be published
6U0E
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BU of 6u0e by Molmil
Neutron crystal structure of T4L M6AE
Descriptor: Endolysin
Authors:Cuneo, M.J, Myles, D.A, Li, L.
Deposit date:2019-08-14
Release date:2020-09-02
Last modified:2023-10-25
Method:NEUTRON DIFFRACTION (2.106 Å), X-RAY DIFFRACTION
Cite:Solvent entry into cavities of T4 lysozyme
To be published
6U0B
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BU of 6u0b by Molmil
Neutron crystal structure of wtT4LD
Descriptor: CHLORIDE ION, Endolysin
Authors:Cuneo, M.J, Myles, D.A, Li, L.
Deposit date:2019-08-14
Release date:2020-08-19
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.951 Å), X-RAY DIFFRACTION
Cite:Solvent entry into cavities of T4 lysozyme.
To be published
6XC1
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BU of 6xc1 by Molmil
Crystal structure of bacteriophage T4 spackle and lysozyme in orthorhombic form
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, Lysozyme, ...
Authors:Shi, K, Oakland, J.T, Kurniawan, F, Moeller, N.H, Aihara, H.
Deposit date:2020-06-07
Release date:2020-12-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural basis of superinfection exclusion by bacteriophage T4 Spackle.
Commun Biol, 3, 2020
1XJT
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BU of 1xjt by Molmil
Crystal structure of active form of P1 phage endolysin Lyz
Descriptor: CITRIC ACID, Lysozyme
Authors:Arockiasamy, A, Sacchettini, J.C.
Deposit date:2004-09-24
Release date:2005-01-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Disulfide isomerization after membrane release of its SAR domain activates P1 lysozyme.
Science, 307, 2005
1XJU
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Crystal structure of secreted inactive form of P1 phage endolysin Lyz
Descriptor: Lysozyme, SULFATE ION
Authors:Arockiasamy, A, Sacchettini, J.C.
Deposit date:2004-09-24
Release date:2005-01-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Disulfide isomerization after membrane release of its SAR domain activates P1 lysozyme.
Science, 307, 2005
6U0C
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BU of 6u0c by Molmil
Neutron crystal structure of wtT4LE
Descriptor: CHLORIDE ION, Endolysin
Authors:Cuneo, M.J, Myles, D.A, Li, L.
Deposit date:2019-08-14
Release date:2020-08-19
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
Cite:Solvent entry into cavities of T4 lysozyme.
To be published

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