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PDB: 63 results

4NPD
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BU of 4npd by Molmil
High-resolution structure of C domain of staphylococcal protein A at cryogenic temperature
Descriptor: Immunoglobulin G-binding protein A, THIOCYANATE ION, ZINC ION
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
8DA5
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BU of 8da5 by Molmil
Coevolved affibody-Z domain pair LL1.c4
Descriptor: GLYCEROL, Immunoglobulin G-binding protein A, affibody LL1.FIVM
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DA7
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BU of 8da7 by Molmil
Coevolved affibody-Z domain pair LL1.c6
Descriptor: Immunoglobulin G-binding protein A, MALONATE ION, affibody LL1.FIFV
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DA3
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BU of 8da3 by Molmil
Coevolved affibody-Z domain pair LL1.c1
Descriptor: Affibody LL1.FILF, Immunoglobulin G-binding protein A, MALONATE ION, ...
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DAB
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BU of 8dab by Molmil
Coevolved affibody-Z domain pair LL2.c17
Descriptor: Affibody LL2.IVVY, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.134 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DAC
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BU of 8dac by Molmil
Coevolved affibody-Z domain pair LL2.c22
Descriptor: Affibody LL2.FILV, GLYCEROL, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DA8
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BU of 8da8 by Molmil
Coevolved affibody-Z domain pair LL2.c1
Descriptor: Affibody LL2.FIIK, GLYCEROL, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DA9
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BU of 8da9 by Molmil
Coevolved affibody-Z domain pair LL2.c3
Descriptor: Affibody LL2.FIIV, GLYCEROL, Immunoglobulin G-binding protein A, ...
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
4NPE
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BU of 4npe by Molmil
High-resolution structure of C domain of staphylococcal protein A at room temperature
Descriptor: Immunoglobulin G-binding protein A, THIOCYANATE ION, ZINC ION
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
4NPF
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BU of 4npf by Molmil
High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker
Descriptor: Immunoglobulin G-binding protein A
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
8DA6
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BU of 8da6 by Molmil
Coevolved affibody-Z domain pair LL1.c5
Descriptor: Affibody LL1.FIIM, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8CPL
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BU of 8cpl by Molmil
YZw2 a scaffold for cryo-EM of small proteins of interest
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Putrescine aminotransferase,Immunoglobulin G-binding protein A
Authors:Moche, M, Friberg, O, Nygren, P.A, Nilvebrant, J.
Deposit date:2023-03-03
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.605 Å)
Cite:Engineered imaging scaffolds for cryo-EM of small proteins of interest.
To Be Published
8DAA
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BU of 8daa by Molmil
Coevolved affibody-Z domain pair LL2.c7
Descriptor: Affibody LL2.FIVK, Immunoglobulin G-binding protein A, MALONATE ION
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
4ZMD
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BU of 4zmd by Molmil
C domain of staphylococcal protein A mutant - Q9W
Descriptor: Immunoglobulin G-binding protein A
Authors:Deis, L.N, Oas, T.G.
Deposit date:2015-05-03
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Suppression of conformational heterogeneity at a protein-protein interface.
Proc.Natl.Acad.Sci.USA, 112, 2015
8DA4
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BU of 8da4 by Molmil
Coevolved affibody-Z domain pair LL1.c2
Descriptor: Affibody LL1.FIVM, Immunoglobulin G-binding protein A, SULFATE ION, ...
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
4ZNC
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BU of 4znc by Molmil
Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W
Descriptor: Ig gamma-3 chain C region, Immunoglobulin G-binding protein A
Authors:Deis, L.N, Oas, T.G.
Deposit date:2015-05-04
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Suppression of conformational heterogeneity at a protein-protein interface.
Proc.Natl.Acad.Sci.USA, 112, 2015
5CBN
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BU of 5cbn by Molmil
Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS
Descriptor: 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid}, Maltose-binding periplasmic protein, mbp3-16,Immunoglobulin G-binding protein A
Authors:Jeong, W.H, Lee, H, Song, D.H, Lee, J.O.
Deposit date:2015-07-01
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Connecting two proteins using a fusion alpha helix stabilized by a chemical cross linker.
Nat Commun, 7, 2016
1LP1
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BU of 1lp1 by Molmil
Protein Z in complex with an in vitro selected affibody
Descriptor: Affibody binding protein Z, Immunoglobulin G binding protein A, MAGNESIUM ION, ...
Authors:Hogbom, M, Eklund, M, Nygren, P.A, Nordlund, P.
Deposit date:2002-05-07
Release date:2003-03-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for recognition by an in vitro evolved affibody.
Proc.Natl.Acad.Sci.USA, 100, 2003
4WWI
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BU of 4wwi by Molmil
Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution
Descriptor: Ig gamma-3 chain C region, Immunoglobulin G-binding protein A
Authors:Deis, L.N, Oas, T.G.
Deposit date:2014-11-11
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.307 Å)
Cite:Suppression of conformational heterogeneity at a protein-protein interface.
Proc.Natl.Acad.Sci.USA, 112, 2015
5H7D
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BU of 5h7d by Molmil
Crystal structure of the YgjG-protein A-Zpa963-calmodulin complex
Descriptor: CALCIUM ION, Putrescine aminotransferase,Immunoglobulin G-binding protein A, Zpa963,Calmodulin
Authors:Youn, S.J, Kwon, N.Y, Lee, J.H, Kim, J.H, Lee, H, Lee, J.O.
Deposit date:2016-11-17
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Construction of novel repeat proteins with rigid and predictable structures using a shared helix method.
Sci Rep, 7, 2017
5H76
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BU of 5h76 by Molmil
Crystal structure of the DARPin-Protein A fusion protein
Descriptor: DARPin,Immunoglobulin G-binding protein A
Authors:Youn, S.J, Kwon, N.Y, Lee, J.H, Kim, J.H, Lee, H, Lee, J.O.
Deposit date:2016-11-17
Release date:2017-06-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Construction of novel repeat proteins with rigid and predictable structures using a shared helix method.
Sci Rep, 7, 2017
5EWX
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BU of 5ewx by Molmil
Fusion protein of T4 lysozyme and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS
Descriptor: 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid}, Endolysin,Immunoglobulin G-binding protein A,Endolysin
Authors:Jeong, W.H, Lee, H, Song, D.H, Lee, J.O.
Deposit date:2015-11-22
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Connecting two proteins using a fusion alpha helix stabilized by a chemical cross linker.
Nat Commun, 7, 2016
5COC
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BU of 5coc by Molmil
Fusion protein of human calmodulin and B4 domain of protein A from staphylococcal aureus
Descriptor: CALCIUM ION, Immunoglobulin G-binding protein A,Calmodulin
Authors:Jeong, W.H, Lee, H, Song, D.H, Lee, J.O.
Deposit date:2015-07-20
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6691 Å)
Cite:Connecting two proteins using a fusion alpha helix stabilized by a chemical cross linker.
Nat Commun, 7, 2016
5H7C
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BU of 5h7c by Molmil
Crystal structure of a repeat protein with two Protein A-DHR14 repeat modules
Descriptor: Immunoglobulin G-binding protein A, DHR14
Authors:Youn, S.J, Kwon, N.Y, Lee, J.H, Kim, J.H, Lee, H, Lee, J.O.
Deposit date:2016-11-17
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Construction of novel repeat proteins with rigid and predictable structures using a shared helix method.
Sci Rep, 7, 2017
5H7A
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BU of 5h7a by Molmil
Crystal structure of a repeat protein with four Protein A repeat module
Descriptor: Immunoglobulin G-binding protein A
Authors:Youn, S.J, Kwon, N.Y, Lee, J.H, Kim, J.H, Lee, H, Lee, J.O.
Deposit date:2016-11-17
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Construction of novel repeat proteins with rigid and predictable structures using a shared helix method.
Sci Rep, 7, 2017

 

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