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PDB: 480 results

6DYF
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BU of 6dyf by Molmil
Cu(II)-bound structure of the engineered cyt cb562 variant, CH3Y
Descriptor: CHLORIDE ION, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Tezcan, F.A, Rittle, J.
Deposit date:2018-07-01
Release date:2019-04-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:An efficient, step-economical strategy for the design of functional metalloproteins.
Nat.Chem., 11, 2019
5YO6
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BU of 5yo6 by Molmil
Crystal Structure of B562RIL with engineered disulfide bond T9C-A36C
Descriptor: Soluble cytochrome b562
Authors:Pu, M, Xu, Z, Song, G, Liu, Z.J.
Deposit date:2017-10-26
Release date:2018-03-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.204 Å)
Cite:Protein crystal quality oriented disulfide bond engineering.
Protein Cell, 9, 2018
4JEA
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BU of 4jea by Molmil
Crystal structure of an engineered Zn-RIDC1 construct with four interfacial disulfide bonds
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ZINC ION, ...
Authors:Tezcan, F.A, Medina-Morales, A.M, Perez, A, Brodin, J.D.
Deposit date:2013-02-26
Release date:2013-08-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:In Vitro and Cellular Self-Assembly of a Zn-Binding Protein Cryptand via Templated Disulfide Bonds.
J.Am.Chem.Soc., 135, 2013
7LSJ
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BU of 7lsj by Molmil
Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H63A, crystallized in the presence of Cu(II)
Descriptor: CALCIUM ION, COPPER (II) ION, HEME C, ...
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-18
Release date:2022-02-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Structure-guided metal selectivity in malleable protein interface mediated by single disulfide bond
To Be Published
7MK4
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BU of 7mk4 by Molmil
Co-bound crystal structure of the engineered cyt cb562 variant, DiCyt2
Descriptor: COBALT (II) ION, HEME C, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-04-21
Release date:2022-04-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
6DYC
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BU of 6dyc by Molmil
Co(II)-bound structure of the engineered cyt cb562 variant, CH3
Descriptor: CALCIUM ION, COBALT (II) ION, HEME C, ...
Authors:Tezcan, F.A, Rittle, J.
Deposit date:2018-07-01
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:An efficient, step-economical strategy for the design of functional metalloproteins.
Nat.Chem., 11, 2019
5YO4
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BU of 5yo4 by Molmil
Crystal Structure of B562RIL with engineered disulfide bond K27C-A79C
Descriptor: Soluble cytochrome b562
Authors:Pu, M, Xu, Z, Song, G, Liu, Z.J.
Deposit date:2017-10-26
Release date:2018-03-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Protein crystal quality oriented disulfide bond engineering.
Protein Cell, 9, 2018
6OT4
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BU of 6ot4 by Molmil
Bimetallic dodecameric cage design 2 (BMC2) from cytochrome cb562
Descriptor: ACETOHYDROXAMIC ACID, FE (III) ION, HEME C, ...
Authors:Golub, E, Esselborn, J, Bailey, J.B, Tezcan, F.A.
Deposit date:2019-05-02
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Constructing protein polyhedra via orthogonal chemical interactions.
Nature, 578, 2020
7LRV
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BU of 7lrv by Molmil
Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Ni(II)
Descriptor: HEME C, NICKEL (II) ION, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-17
Release date:2022-02-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
256B
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BU of 256b by Molmil
IMPROVEMENT OF THE 2.5 ANGSTROMS RESOLUTION MODEL OF CYTOCHROME B562 BY REDETERMINING THE PRIMARY STRUCTURE AND USING MOLECULAR GRAPHICS
Descriptor: CYTOCHROME B562, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Hamada, K, Bethge, P.H, Mathews, F.S.
Deposit date:1990-01-16
Release date:1991-01-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Improvement of the 2.5 A resolution model of cytochrome b562 by redetermining the primary structure and using molecular graphics.
J.Mol.Biol., 148, 1981
6DYG
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BU of 6dyg by Molmil
Fe(II)-bound structure of the engineered cyt cb562 variant, CH3Y
Descriptor: FE (III) ION, HEME C, MAGNESIUM ION, ...
Authors:Tezcan, F.A, Rittle, J.
Deposit date:2018-07-01
Release date:2019-04-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:An efficient, step-economical strategy for the design of functional metalloproteins.
Nat.Chem., 11, 2019
6OT8
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BU of 6ot8 by Molmil
Bimetallic hexameric cage design 4 (BMC4) from cytochrome cb562
Descriptor: ACETOHYDROXAMIC ACID, FE (III) ION, HEME C, ...
Authors:Golub, E, Esselborn, J, Bailey, J.B, Tezcan, F.A.
Deposit date:2019-05-02
Release date:2020-01-29
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Constructing protein polyhedra via orthogonal chemical interactions.
Nature, 578, 2020
7LSN
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BU of 7lsn by Molmil
Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H63A, crystallized in the presence of Ni(II)
Descriptor: HEME C, NICKEL (II) ION, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-18
Release date:2022-02-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure-guided metal selectivity in malleable protein interface mediated by single disulfide bond
To Be Published
8DRM
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BU of 8drm by Molmil
Zn(II)-bound B2 dimer (H60/H100/H104) formed in Zn(II)//Cu(II) (M1 // M2) condition
Descriptor: HEME C, Soluble cytochrome b562, ZINC ION
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2022-07-21
Release date:2022-10-12
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Design of a Flexible, Zn-Selective Protein Scaffold that Displays Anti-Irving-Williams Behavior.
J.Am.Chem.Soc., 144, 2022
5YM7
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BU of 5ym7 by Molmil
Crystal Structure of B562RIL without disulfide bond
Descriptor: Soluble cytochrome b562
Authors:Pu, M, Xu, Z, Song, G, Liu, Z.J.
Deposit date:2017-10-21
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.56225181 Å)
Cite:Protein crystal quality oriented disulfide bond engineering.
Protein Cell, 9, 2018
7RWX
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BU of 7rwx by Molmil
Crystal structure of a Zn-bound RIDC1 variant in the presence of reductant
Descriptor: CALCIUM ION, HEME C, Soluble cytochrome b562, ...
Authors:Kakkis, A, Golub, E.
Deposit date:2021-08-20
Release date:2022-06-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Redox- and metal-directed structural diversification in designed metalloprotein assemblies.
Chem.Commun.(Camb.), 58, 2022
7LSL
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BU of 7lsl by Molmil
Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H63A, crystallized in the presence of Ni(II)
Descriptor: HEME C, NICKEL (II) ION, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-18
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure-guided metal selectivity in malleable protein interface mediated by single disulfide bond
To Be Published
8DRL
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BU of 8drl by Molmil
Zn(II)-bound B2 dimer (H60/H100/H104) formed in Cu(II)//Zn(II) (M1 // M2) condition
Descriptor: HEME C, Soluble cytochrome b562, ZINC ION
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2022-07-21
Release date:2022-10-12
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Design of a Flexible, Zn-Selective Protein Scaffold that Displays Anti-Irving-Williams Behavior.
J.Am.Chem.Soc., 144, 2022
8DEN
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BU of 8den by Molmil
Heme-Free Cytochrome Variant ApoCyt
Descriptor: Soluble cytochrome b562
Authors:Hoffnagle, A.H, Eng, V.H, Tezcan, F.A.
Deposit date:2022-06-20
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Computationally Guided Redesign of a Heme-free Cytochrome with Native-like Structure and Stability.
Biochemistry, 61, 2022
6DYL
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BU of 6dyl by Molmil
Vanadyl-bound structure of the engineered cyt b562 variant, CH3Y*
Descriptor: Soluble cytochrome b562, VANADIUM ION
Authors:Tezcan, F.A, Rittle, J.
Deposit date:2018-07-01
Release date:2019-04-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.691 Å)
Cite:An efficient, step-economical strategy for the design of functional metalloproteins.
Nat.Chem., 11, 2019
7RWW
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BU of 7rww by Molmil
Crystal structure of a Zn-bound RIDC1 variant
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Kakkis, A, Golub, E.
Deposit date:2021-08-20
Release date:2022-06-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Redox- and metal-directed structural diversification in designed metalloprotein assemblies.
Chem.Commun.(Camb.), 58, 2022
7LR5
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BU of 7lr5 by Molmil
Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Ni(II) (M1) and Cu(II) (M2)
Descriptor: HEME C, NICKEL (II) ION, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-15
Release date:2022-02-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
7LRA
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BU of 7lra by Molmil
Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Cu(II) (M1) and Ni(II) (M2)
Descriptor: HEME C, NICKEL (II) ION, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-16
Release date:2022-02-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
5YO3
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BU of 5yo3 by Molmil
Crystal Structure of B562RIL with engineered disulfide bond V16C-A29C
Descriptor: SULFATE ION, Soluble cytochrome b562
Authors:Pu, M, Xu, Z, Song, G, Liu, Z.J.
Deposit date:2017-10-26
Release date:2018-05-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Protein crystal quality oriented disulfide bond engineering.
Protein Cell, 9, 2018
8DRF
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BU of 8drf by Molmil
Zn(II)-bound B2 dimer (H60/H100/H104)
Descriptor: HEME C, Soluble cytochrome b562, ZINC ION
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2022-07-20
Release date:2022-10-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design of a Flexible, Zn-Selective Protein Scaffold that Displays Anti-Irving-Williams Behavior.
J.Am.Chem.Soc., 144, 2022

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PDB entries from 2024-11-06

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