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PDB: 15 results

6X6X
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BU of 6x6x by Molmil
Crystal structure of enzymatic binary toxin component from Clostridium difficile in complex with
Descriptor: ADP-ribosyltransferase, DIMETHYL SULFOXIDE, N-(2-chlorophenyl)-N'-[(furan-2-yl)methyl]thiourea, ...
Authors:Pozharski, E.
Deposit date:2020-05-29
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal structure of enzymatic binary toxin component from Clostridium difficile in complex with
To Be Published
2WN4
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BU of 2wn4 by Molmil
Structural Basis for Substrate Recognition in the Enzymatic Component of ADP-ribosyltransferase Toxin CDTa from Clostridium difficile
Descriptor: ADP-RIBOSYLTRANSFERASE ENZYMATIC COMPONENT
Authors:Sundriyal, A, Roberts, A.K, Shone, C.C, Acharya, K.R.
Deposit date:2009-07-07
Release date:2009-08-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis for Substrate Recognition in the Enzymatic Component of Adp-Ribosyltransferase Toxin Cdta from Clostridium Difficile.
J.Biol.Chem., 284, 2009
6X6W
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BU of 6x6w by Molmil
Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile
Descriptor: ADP-ribosyltransferase
Authors:Pozharski, E.
Deposit date:2020-05-29
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile
To Be Published
2WN5
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BU of 2wn5 by Molmil
Structural Basis for Substrate Recognition in the Enzymatic Component of ADP-ribosyltransferase Toxin CDTa from Clostridium difficile
Descriptor: ADP-RIBOSYLTRANSFERASE ENZYMATIC COMPONENT
Authors:Sundriyal, A, Roberts, A.K, Shone, C.C, Acharya, K.R.
Deposit date:2009-07-07
Release date:2009-08-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Substrate Recognition in the Enzymatic Component of Adp-Ribosyltransferase Toxin Cdta from Clostridium Difficile.
J.Biol.Chem., 284, 2009
2WN6
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BU of 2wn6 by Molmil
Structural Basis for Substrate Recognition in the Enzymatic Component of ADP-ribosyltransferase Toxin CDTa from Clostridium difficile
Descriptor: ADP-RIBOSYLTRANSFERASE ENZYMATIC COMPONENT, GLYCEROL, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Sundriyal, A, Roberts, A.K, Shone, C.C, Acharya, K.R.
Deposit date:2009-07-07
Release date:2009-08-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Basis for Substrate Recognition in the Enzymatic Component of Adp-Ribosyltransferase Toxin Cdta from Clostridium Difficile.
J.Biol.Chem., 284, 2009
2WN8
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BU of 2wn8 by Molmil
Structural Basis for Substrate Recognition in the Enzymatic Component of ADP-ribosyltransferase Toxin CDTa from Clostridium difficile
Descriptor: ADP-RIBOSYLTRANSFERASE ENZYMATIC COMPONENT
Authors:Sundriyal, A, Roberts, A.K, Shone, C.C, Acharya, K.R.
Deposit date:2009-07-07
Release date:2009-08-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Substrate Recognition in the Enzymatic Component of Adp-Ribosyltransferase Toxin Cdta from Clostridium Difficile.
J.Biol.Chem., 284, 2009
6X6R
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BU of 6x6r by Molmil
Crystal structure of C.difficile ribosyltransferase CDTa in complex with pCl-phenylthioDADMeImmA
Descriptor: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-{[(4-chlorophenyl)sulfanyl]methyl}pyrrolidin-3-ol, ADP-ribosyltransferase, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Pozharski, E.
Deposit date:2020-05-29
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of C.difficile ribosyltransferase CDTa in complex with pCl-phenylthioDADMeImmA
To Be Published
2WN7
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BU of 2wn7 by Molmil
Structural Basis for Substrate Recognition in the Enzymatic Component of ADP-ribosyltransferase Toxin CDTa from Clostridium difficile
Descriptor: ADP-RIBOSYLTRANSFERASE ENZYMATIC COMPONENT, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Sundriyal, A, Roberts, A.K, Shone, C.C, Acharya, K.R.
Deposit date:2009-07-07
Release date:2009-08-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Basis for Substrate Recognition in the Enzymatic Component of Adp-Ribosyltransferase Toxin Cdta from Clostridium Difficile.
J.Biol.Chem., 284, 2009
6X41
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BU of 6x41 by Molmil
Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile
Descriptor: CdtA, GLYCEROL
Authors:Pozharski, E.
Deposit date:2020-05-21
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile
To Be Published
6X6V
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BU of 6x6v by Molmil
Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile in complex with NADPH
Descriptor: CdtA, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Pozharski, E.
Deposit date:2020-05-29
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile in complex with NADPH
To Be Published
7VNJ
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BU of 7vnj by Molmil
Complex structure of Clostridioides difficile enzymatic component (CDTa) and binding component (CDTb) pore with short stem
Descriptor: ADP-ribosylating binary toxin binding subunit CdtB, ADP-ribosyltransferase enzymatic component, CALCIUM ION
Authors:Yamada, T, Kawamoto, A, Yoshida, T, Sato, Y, Kato, T, Tsuge, H.
Deposit date:2021-10-11
Release date:2022-10-26
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Cryo-EM structures of the translocational binary toxin complex CDTa-bound CDTb-pore from Clostridioides difficile.
Nat Commun, 13, 2022
7VNN
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BU of 7vnn by Molmil
Complex structure of Clostridioides difficile enzymatic component (CDTa) and binding component (CDTb) pore with long stem
Descriptor: ADP-ribosylating binary toxin binding subunit CdtB, CALCIUM ION, CdtA
Authors:Yamada, T, Kawamoto, A, Yoshida, T, Sato, Y, Kato, T, Tsuge, H.
Deposit date:2021-10-11
Release date:2022-10-26
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Cryo-EM structures of the translocational binary toxin complex CDTa-bound CDTb-pore from Clostridioides difficile.
Nat Commun, 13, 2022
7YVS
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BU of 7yvs by Molmil
Complex structure of Clostridioides difficile binary toxin unfolded CDTa-bound CDTb-pore (short).
Descriptor: ADP-ribosylating binary toxin binding subunit CdtB, ADP-ribosylating binary toxin enzymatic subunit CdtA, CALCIUM ION
Authors:Yamada, T, Kawamoto, A, Yoshida, T, Sato, Y, Kato, T, Tsuge, H.
Deposit date:2022-08-19
Release date:2022-10-26
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of the translocational binary toxin complex CDTa-bound CDTb-pore from Clostridioides difficile.
Nat Commun, 13, 2022
7YVQ
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BU of 7yvq by Molmil
Complex structure of Clostridioides difficile binary toxin folded CDTa-bound CDTb-pore (short).
Descriptor: ADP-ribosylating binary toxin binding subunit CdtB, ADP-ribosylating binary toxin enzymatic subunit CdtA, CALCIUM ION
Authors:Yamada, T, Kawamoto, A, Yoshida, T, Sato, Y, Kato, T, Tsuge, H.
Deposit date:2022-08-19
Release date:2022-10-26
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Cryo-EM structures of the translocational binary toxin complex CDTa-bound CDTb-pore from Clostridioides difficile.
Nat Commun, 13, 2022
6V1S
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BU of 6v1s by Molmil
Structure of the Clostridioides difficile transferase toxin
Descriptor: ADP-ribosylating binary toxin enzymatic subunit CdtA, ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Sheedlo, M.J, Anderson, D.M, Thomas, A.K, Lacy, D.B.
Deposit date:2019-11-21
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural elucidation of theClostridioides difficiletransferase toxin reveals a single-site binding mode for the enzyme.
Proc.Natl.Acad.Sci.USA, 117, 2020

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PDB entries from 2024-07-17

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