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PDB: 3 results

4I9V
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BU of 4i9v by Molmil
The atomic structure of 5-Hydroxymethyl 2'-deoxycitidine base paired with 2'-deoxyguanosine in Dickerson Drew Dodecamer
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5HC)P*GP*CP*G)-3'), MAGNESIUM ION, SPERMINE (FULLY PROTONATED FORM)
Authors:Nocek, B, Szulik, M.W, Joachimiak, A, Stone, M.P.
Deposit date:2012-12-05
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Differential stabilities and sequence-dependent base pair opening dynamics of watson-crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Biochemistry, 54, 2015
4PWM
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BU of 4pwm by Molmil
Crystal structure of Dickerson Drew Dodecamer with 5-carboxycytosine
Descriptor: 5'-[CGCGAATT(5CC)GCG]-3'
Authors:Szulik, M.W, Pallan, P, Banerjee, S, Voehler, M, Egli, M, Stone, M.P.
Deposit date:2014-03-20
Release date:2015-02-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Differential stabilities and sequence-dependent base pair opening dynamics of watson-crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Biochemistry, 54, 2015
4QC7
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BU of 4qc7 by Molmil
Dodecamer structure of 5-formylcytosine containing DNA
Descriptor: short DNA strands
Authors:Szulik, M.W, Pallan, P, Egli, M, Stone, M.P.
Deposit date:2014-05-09
Release date:2015-02-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Differential stabilities and sequence-dependent base pair opening dynamics of watson-crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Biochemistry, 54, 2015

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