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6DAX
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BU of 6dax by Molmil
X-ray crystal structure of VioC bound to Fe(II), L-homoarginine, and 2-oxoglutarate
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
Authors:Dunham, N.P, Mitchell, A.J, Boal, A.K.
Deposit date:2018-05-02
Release date:2018-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018
7YW9
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BU of 7yw9 by Molmil
Crystal structure of the triple mutant CmnC-L136Q,S138G,D249Y in complex with alpha-KG
Descriptor: ACETATE ION, CmnC, D-ARGININE, ...
Authors:Huang, S.J, Hsiao, Y.H, Lin, E.C, Hsiao, P.Y, Chang, C.Y.
Deposit date:2022-08-22
Release date:2023-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of the alpha-ketoglutarate-dependent non-heme iron oxygenase CmnC in capreomycin biosynthesis and its engineering to catalyze hydroxylation of the substrate enantiomer.
Front Chem, 10, 2022
5J92
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BU of 5j92 by Molmil
Crystal structure of a putative alpha-ketoglutarate dependent 2,4-D dioxygenase from Burkholderia xenovorans
Descriptor: ACETATE ION, FE (II) ION, Putative alpha KG dependent 2,4-D dioxygenase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-04-08
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of a putative alpha-ketoglutarate dependent 2,4-D dioxygenase from Burkholderia xenovorans
to be published
7SCP
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BU of 7scp by Molmil
The crystal structure of ScoE in complex with intermediate
Descriptor: (3R)-3-(oxaloamino)butanoic acid, 1,2-ETHANEDIOL, FE (II) ION, ...
Authors:Cha, L, Chen, J, Zhou, J, Chang, W.
Deposit date:2021-09-28
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Deciphering the Reaction Pathway of Mononuclear Iron Enzyme-Catalyzed N-C Triple Bond Formation in Isocyanide Lipopeptide and Polyketide Biosynthesis
Acs Catalysis, 12, 2022
1VZ5
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BU of 1vz5 by Molmil
Succinate Complex of AtsK
Descriptor: PUTATIVE ALKYLSULFATASE ATSK, SUCCINIC ACID
Authors:Mueller, I, Stueckl, A.C, Uson, I, Kertesz, M.
Deposit date:2004-05-14
Release date:2004-11-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Succinate Complex Crystal Structures of the Alpha-Ketoglutarate-Dependent Dioxygenase Atsk: Steric Aspects of Enzyme Self-Hydroxylation
J.Biol.Chem., 280, 2005
3EAT
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BU of 3eat by Molmil
Crystal structure of the PvcB (PA2255) protein from Pseudomonas aeruginosa
Descriptor: Pyoverdine biosynthesis protein PvcB, SODIUM ION
Authors:Gulick, A.M, Drake, E.J.
Deposit date:2008-08-26
Release date:2008-10-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structures of Pseudomonas aeruginosa PvcA and PvcB, two proteins involved in the synthesis of 2-isocyano-6,7-dihydroxycoumarin.
J.Mol.Biol., 384, 2008
7TCL
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BU of 7tcl by Molmil
Crystal structure of P.IsnB complexed with tyrosine isonitrile
Descriptor: (2S)-3-(4-hydroxyphenyl)-2-isocyanopropanoic acid, MANGANESE (II) ION, SULFATE ION, ...
Authors:Kim, W, Zhang, Y.
Deposit date:2021-12-26
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate.
Nat Commun, 13, 2022
6EDH
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BU of 6edh by Molmil
Taurine:2OG dioxygenase (TauD) bound to the vanadyl ion, taurine, and succinate
Descriptor: 2-AMINOETHANESULFONIC ACID, ACETATE ION, Alpha-ketoglutarate-dependent taurine dioxygenase, ...
Authors:Davis, K.M, Altmyer, M, Boal, A.K.
Deposit date:2018-08-09
Release date:2019-08-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.73000407 Å)
Cite:Structure of a Ferryl Mimic in the Archetypal Iron(II)- and 2-(Oxo)-glutarate-Dependent Dioxygenase, TauD.
Biochemistry, 58, 2019
5KEU
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BU of 5keu by Molmil
Crystal Structure of a Taurine Dioxygenase from Burkholderia xenovorans
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, MAGNESIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-06-10
Release date:2016-06-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of a Taurine Dioxygenase from Burkholderia xenovorans
to be published
4FFA
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BU of 4ffa by Molmil
Sulfatase from Mycobacterium tuberculosis
Descriptor: NITRATE ION, Rv3406 alkyl sulfatase
Authors:Sogi, K.M, Gartner, Z.J, Breidenbach, M.A, Bertozzi, C.R.
Deposit date:2012-05-31
Release date:2013-06-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mycobacterium tuberculosis Rv3406 Is a Type II Alkyl Sulfatase Capable of Sulfate Scavenging.
Plos One, 8, 2013
5HSX
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BU of 5hsx by Molmil
Crystal Structure of a Putative Alpha-ketoglutarate-dependent Taurine Dioxygenase from Burkholderia xenovorans
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Putative alpha-ketoglutarate-dependent taurine dioxygenase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-01-26
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a Putative Alpha-ketoglutarate-dependent Taurine Dioxygenase from Burkholderia xenovorans
to be published
5VN6
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BU of 5vn6 by Molmil
Crystal structure of Taurine dioxygenase from Burkholderia ambifaria
Descriptor: MAGNESIUM ION, Taurine dioxygenase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-04-28
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Taurine dioxygenase from Burkholderia ambifaria
TO BE PUBLISHED
5EQN
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BU of 5eqn by Molmil
Structure of phosphonate hydroxylase
Descriptor: FrbJ, MAGNESIUM ION
Authors:Li, C, Hu, Y, Zhang, H.
Deposit date:2015-11-13
Release date:2016-05-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of a phosphonate hydroxylase with an access tunnel at the back of the active site.
Acta Crystallogr.,Sect.F, 72, 2016
7N7V
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BU of 7n7v by Molmil
Crystal structure of TtnM, a Fe(II)-alpha-ketoglutarate-dependent hydroxylase from the tautomycetin biosynthesis pathway in Streptomyces griseochromogenes at 2 A.
Descriptor: CHLORIDE ION, FE (II) ION, Predicted hydroxylase
Authors:Han, L, Xu, W, Ma, M, Miller, M.D, Shen, B, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2021-06-11
Release date:2022-07-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure of TtnM, a Fe(II)-alpha-ketoglutarate-dependent hydroxylase from the tautomycetin biosynthesis pathway in Streptomyces griseochromogenes.
To Be Published
6L6W
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BU of 6l6w by Molmil
The structure of ScoE with intermediate
Descriptor: (3R)-3-[[(1R)-1,2-bis(oxidanyl)-2-oxidanylidene-ethyl]amino]butanoic acid, FE (II) ION, FORMIC ACID, ...
Authors:Chen, T.Y, Chen, J, Zhou, J, Chang, W.
Deposit date:2019-10-29
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.
Angew.Chem.Int.Ed.Engl., 59, 2020
1Y0Z
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BU of 1y0z by Molmil
X-ray structure of gene product from Arabidopsis thaliana At3g21360
Descriptor: FE (II) ION, SULFATE ION, protein product of AT3G21360
Authors:Wesenberg, G.E, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-11-16
Release date:2004-11-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure at 2.4 A resolution of the protein from gene locus At3g21360, a putative Fe(II)/2-oxoglutarate-dependent enzyme from Arabidopsis thaliana.
Acta Crystallogr.,Sect.F, 61, 2005
1VZ4
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BU of 1vz4 by Molmil
Fe-Succinate Complex of AtsK
Descriptor: FE (II) ION, PUTATIVE ALKYLSULFATASE ATSK, SUCCINIC ACID
Authors:Mueller, I, Stueckl, A.C, Uson, I, Kertesz, M.
Deposit date:2004-05-14
Release date:2004-11-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Succinate Complex Crystal Structures of the Alpha-Ketoglutarate-Dependent Dioxygenase Atsk: Steric Aspects of Enzyme Self-Hydroxylation
J.Biol.Chem., 280, 2005
8EVO
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BU of 8evo by Molmil
Sulfatase from Mycobacterium tuberculosis (Rv3406) in complex with inhibitor FG2216
Descriptor: Alpha-ketoglutarate-dependent sulfate ester dioxygenase, N-[(1-CHLORO-4-HYDROXYISOQUINOLIN-3-YL)CARBONYL]GLYCINE, NICKEL (II) ION
Authors:Juan, T.-J, Leung, I, Squire, C.J.
Deposit date:2022-10-20
Release date:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Sulfatase from Mycobacterium tuberculosis (Rv3406) in complex with inhibitors NOG and FG2216
To Be Published
8EVN
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BU of 8evn by Molmil
Sulfatase from Mycobacterium tuberculosis (Rv3406) in complex with N-oxalylglycine (NOG)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-ketoglutarate-dependent sulfate ester dioxygenase, N-OXALYLGLYCINE, ...
Authors:Juan, T.-J, Leung, I, Squire, C.J.
Deposit date:2022-10-20
Release date:2023-10-25
Method:X-RAY DIFFRACTION (2.644 Å)
Cite:Sulfatase from Mycobacterium tuberculosis (Rv3406) in complex with inhibitors NOG and FG2216
To Be Published
6XN6
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BU of 6xn6 by Molmil
ScoE with the CABA substrate bound and His299 and Arg157 flipped out
Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Jonnalagadda, R, Drennan, C.L.
Deposit date:2020-07-02
Release date:2021-01-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase.
J.Biol.Chem., 296, 2021
4OJ8
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BU of 4oj8 by Molmil
Crystal structure of carbapenem synthase in complex with (3S,5S)-carbapenam
Descriptor: (2S,5S)-7-oxo-1-azabicyclo[3.2.0]heptane-2-carboxylic acid, (5R)-carbapenem-3-carboxylate synthase, 2-OXOGLUTARIC ACID, ...
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2014-01-20
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of the C5 stereoinversion reaction in the biosynthesis of carbapenem antibiotics.
Science, 343, 2014
6XPA
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BU of 6xpa by Molmil
ScoE with oxovanadium and the CABA substrate bound and His299 and Arg157 flipped out
Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Jonnalagadda, R, Drennan, C.L.
Deposit date:2020-07-08
Release date:2021-01-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase.
J.Biol.Chem., 296, 2021
6L6X
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BU of 6l6x by Molmil
The structure of ScoE with substrate
Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, D(-)-TARTARIC ACID, FE (II) ION, ...
Authors:Chen, T.Y, Chen, J, Zhou, J, Chang, W.
Deposit date:2019-10-29
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L86
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BU of 6l86 by Molmil
The structure of SfaA
Descriptor: (2S)-2-hydroxybutanedioic acid, D-MALATE, FE (II) ION, ...
Authors:Chen, T.Y, Chen, J, Zhou, J, Chang, W.
Deposit date:2019-11-05
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.
Angew.Chem.Int.Ed.Engl., 59, 2020
6VWR
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BU of 6vwr by Molmil
X-ray structure of clavaminate synthase with vanadyl, succinate, and deoxyguanidinoproclavaminic acid
Descriptor: Clavaminate synthase 3, DEOXYGUANIDINOPROCLAVAMINIC ACID, SUCCINIC ACID, ...
Authors:Boal, A.K, Vavra, J.
Deposit date:2020-02-20
Release date:2021-02-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray structure of clavaminate synthase with vanadyl, succinate, and deoxyguanidinoproclavaminic acid
To Be Published

221051

數據於2024-06-12公開中

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