1F50
| BACTERIORHODOPSIN-BR STATE OF THE E204Q MUTANT AT 1.7 ANGSTROM RESOLUTION | Descriptor: | 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, BACTERIORHODOPSIN, ... | Authors: | Luecke, H, Schobert, B, Cartailler, J.P, Richter, H.T, Rosengarth, A, Needleman, R, Lanyi, J.K. | Deposit date: | 2000-06-10 | Release date: | 2000-08-09 | Last modified: | 2023-08-09 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Coupling photoisomerization of retinal to directional transport in bacteriorhodopsin. J.Mol.Biol., 300, 2000
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6EID
| Crystal structure of wild-type Channelrhodopsin 2 | Descriptor: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Archaeal-type opsin 2, PHOSPHATE ION, ... | Authors: | Borshchevskiy, V, Kovalev, K, Volkov, O, Polovinkin, V, Marin, E, Balandin, T, Astashkin, R, Bamann, C, Bueldt, G, Willlbold, D, Popov, A, Bamberg, E, Gordeliy, V. | Deposit date: | 2017-09-19 | Release date: | 2017-12-06 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.39 Å) | Cite: | Structural insights into ion conduction by channelrhodopsin 2. Science, 358, 2017
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8JH0
| Crystal structure of the light-driven sodium pump IaNaR | Descriptor: | RETINAL, Xanthorhodopsin | Authors: | Hashimoto, T, Kato, K, Tanaka, Y, Yao, M, Kikukawa, T. | Deposit date: | 2023-05-22 | Release date: | 2023-11-01 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (2.79 Å) | Cite: | Multistep conformational changes leading to the gate opening of light-driven sodium pump rhodopsin. J.Biol.Chem., 299, 2023
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6CSM
| Crystal structure of the natural light-gated anion channel GtACR1 | Descriptor: | GtACR1, OLEIC ACID, RETINAL | Authors: | Kato, H.E, Kim, Y, Yamashita, K, Kobilka, B.K, Deisseroth, K. | Deposit date: | 2018-03-21 | Release date: | 2018-09-05 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural mechanisms of selectivity and gating in anion channelrhodopsins. Nature, 561, 2018
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7L1E
| The Crystal Structure of Bromide-Bound GtACR1 | Descriptor: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Anion channelrhodopsin-1, BROMIDE ION, ... | Authors: | Li, H, Huang, C.Y, Wang, M, Spudich, J.L, Zheng, L. | Deposit date: | 2020-12-14 | Release date: | 2021-05-26 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | The crystal structure of bromide-bound Gt ACR1 reveals a pre-activated state in the transmembrane anion tunnel. Elife, 10, 2021
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4XTL
| Crystal structure of the light-driven sodium pump KR2 in the monomeric blue form, pH 4.3 | Descriptor: | EICOSANE, GLYCEROL, SODIUM ION, ... | Authors: | Gushchin, I, Shevchenko, V, Polovinkin, V, Gordeliy, V. | Deposit date: | 2015-01-23 | Release date: | 2015-04-01 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Crystal structure of a light-driven sodium pump. Nat.Struct.Mol.Biol., 22, 2015
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5B6W
| A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 16 ns after photoexcitation | Descriptor: | 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ... | Authors: | Royant, A, Nango, E, Nakane, T, Tanaka, T, Arima, T, Neutze, R, Iwata, S. | Deposit date: | 2016-06-02 | Release date: | 2016-12-21 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | A three-dimensional movie of structural changes in bacteriorhodopsin Science, 354, 2016
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5B6Z
| A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 1.725 ms us after photoexcitation | Descriptor: | 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ... | Authors: | Royant, A, Nango, E, Nakane, T, Tanaka, T, Arima, T, Neutze, R, Iwata, S. | Deposit date: | 2016-06-02 | Release date: | 2016-12-21 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | A three-dimensional movie of structural changes in bacteriorhodopsin Science, 354, 2016
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4FPD
| Deprotonation of D96 in bacteriorhodopsin opens the proton uptake pathway | Descriptor: | 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, CHLORIDE ION, ... | Authors: | Wang, T, Sessions, A.O, Lunde, C.S, Rouani, S, Glaeser, R.M, Facciotti, M.T, Duan, Y. | Deposit date: | 2012-06-22 | Release date: | 2013-02-27 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | Deprotonation of d96 in bacteriorhodopsin opens the proton uptake pathway. Structure, 21, 2013
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4TL3
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1X0S
| Crystal structure of the 13-cis isomer of bacteriorhodopsin | Descriptor: | 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ... | Authors: | Nishikawa, T, Murakami, M, Kouyama, T. | Deposit date: | 2005-03-28 | Release date: | 2005-08-30 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal structure of the 13-cis isomer of bacteriorhodopsin in the dark-adapted state. J.Mol.Biol., 352, 2005
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4FBZ
| Crystal structure of deltarhodopsin from Haloterrigena thermotolerans | Descriptor: | (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, BACTERIORUBERIN, ... | Authors: | Kouyama, T. | Deposit date: | 2012-05-23 | Release date: | 2013-05-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Crystal structure of deltarhodopsin-3 from Haloterrigena thermotolerans Proteins, 81, 2013
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1X0K
| Crystal Structure of Bacteriorhodopsin at pH 10 | Descriptor: | 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ... | Authors: | Okumura, H, Murakami, M, Kouyama, T. | Deposit date: | 2005-03-23 | Release date: | 2005-08-02 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin J.Mol.Biol., 351, 2005
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4XTO
| Crystal structure of the light-driven sodium pump KR2 in the pentameric red form, pH 5.6 | Descriptor: | EICOSANE, SODIUM ION, Sodium pumping rhodopsin | Authors: | Gushchin, I, Shevchenko, V, Polovinkin, V, Gordeliy, V. | Deposit date: | 2015-01-23 | Release date: | 2015-04-01 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structure of a light-driven sodium pump. Nat.Struct.Mol.Biol., 22, 2015
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4X32
| Bacteriorhodopsin ground state structure collected in cryo conditions from crystals obtained in LCP with PEG as a precipitant. | Descriptor: | 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL | Authors: | Nogly, P, Standfuss, J. | Deposit date: | 2014-11-27 | Release date: | 2015-02-18 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Lipidic cubic phase serial millisecond crystallography using synchrotron radiation. Iucrj, 2, 2015
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4X31
| Room temperature structure of bacteriorhodopsin from lipidic cubic phase obtained with serial millisecond crystallography using synchrotron radiation | Descriptor: | 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL | Authors: | Nogly, P, James, D, Wang, D, White, T, Zatsepin, N, Shilova, A, Nelson, G, Liu, H, Johansson, L, Heymann, M, Jaeger, K, Metz, M, Wickstrand, C, Wu, W, Baath, P, Berntsen, P, Oberthuer, D, Panneels, V, Cherezov, V, Chapman, H, Spence, J, Schertler, G, Neutze, R, Moraes, I, Burghammer, M, Standfuss, J, Weierstall, U. | Deposit date: | 2014-11-27 | Release date: | 2015-02-18 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Lipidic cubic phase serial millisecond crystallography using synchrotron radiation. Iucrj, 2, 2015
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4WAV
| Crystal Structure of Haloquadratum walsbyi bacteriorhodopsin mutant D93N | Descriptor: | Bacteriorhodopsin-I, RETINAL, [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate | Authors: | Wang, A.H.J, Hsu, M.F, Yang, C.S, Fu, H.Y. | Deposit date: | 2014-09-02 | Release date: | 2015-09-23 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structure of an acid-tolerant light-driven proton pump at 1.85 Angstroms resolution To be published
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6NWD
| X-ray Crystallographic structure of Gloeobacter rhodopsin | Descriptor: | 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, DECANE, DODECANE, ... | Authors: | Ernst, O.P, Morizumi, T, Ou, W.L. | Deposit date: | 2019-02-06 | Release date: | 2019-08-14 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | X-ray Crystallographic Structure and Oligomerization of Gloeobacter Rhodopsin. Sci Rep, 9, 2019
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8CL8
| Krokinobacter eikastus rhodopsin 2 (KR2) extrapolated map 1us after light activation | Descriptor: | EICOSANE, RETINAL, Sodium pumping rhodopsin | Authors: | Bertrand, Q, Kepa, M.W, Weinert, T, Wranik, M, Standfuss, J. | Deposit date: | 2023-02-16 | Release date: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | A multi-reservoir extruder for time-resolved serial protein crystallography and compound screening at X-ray free-electron lasers. Nat Commun, 14, 2023
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6LM1
| The crystal structure of cyanorhodopsin (CyR) N4075R from cyanobacteria Tolypothrix sp. NIES-4075 | Descriptor: | DECANE, DODECANE, HEXADECANE, ... | Authors: | Hosaka, T, Kimura-Someya, T, Shirouzu, M. | Deposit date: | 2019-12-24 | Release date: | 2020-10-21 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | A unique clade of light-driven proton-pumping rhodopsins evolved in the cyanobacterial lineage. Sci Rep, 10, 2020
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8CL7
| Krokinobacter eikastus rhodopsin 2 (KR2) in dark state | Descriptor: | EICOSANE, RETINAL, Sodium pumping rhodopsin | Authors: | Bertrand, Q, Wranik, M, Kepa, M.W, Weinert, T, Standfuss, J. | Deposit date: | 2023-02-16 | Release date: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.76 Å) | Cite: | A multi-reservoir extruder for time-resolved serial protein crystallography and compound screening at X-ray free-electron lasers. Nat Commun, 14, 2023
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2WJL
| Bacteriorhodopsin mutant E194D | Descriptor: | Bacteriorhodopsin, RETINAL | Authors: | Potschies, M, Wolf, S, Freier, E, Hofmann, E, Gerwert, K. | Deposit date: | 2009-05-27 | Release date: | 2010-08-25 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Directional proton transfer in membrane proteins achieved through protonated protein-bound water molecules: a proton diode. Angew. Chem. Int. Ed. Engl., 49, 2010
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2WJK
| Bacteriorhodopsin mutant E204D | Descriptor: | 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL | Authors: | Potschies, M, Hofmann, E, Gerwert, K. | Deposit date: | 2009-05-27 | Release date: | 2010-08-25 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Directional proton transfer in membrane proteins achieved through protonated protein-bound water molecules: a proton diode. Angew. Chem. Int. Ed. Engl., 49, 2010
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3DDL
| Crystallographic Structure of Xanthorhodopsin, a Light-Driven Ion Pump with Dual Chromophore | Descriptor: | 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, RETINAL, ... | Authors: | Stagno, J, Luecke, H, Schobert, B, Lanyi, J.K, Imasheva, E.S, Wang, J.M, Balashov, S.P. | Deposit date: | 2008-06-05 | Release date: | 2008-10-14 | Last modified: | 2016-06-08 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystallographic structure of xanthorhodopsin, the light-driven proton pump with a dual chromophore. Proc.Natl.Acad.Sci.USA, 105, 2008
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1X0I
| Crystal Structure of the Acid Blue Form of Bacteriorhodopsin | Descriptor: | 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ... | Authors: | Okumura, H, Murakami, M, Kouyama, T. | Deposit date: | 2005-03-23 | Release date: | 2005-08-02 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin J.Mol.Biol., 351, 2005
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