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8HCK
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BU of 8hck by Molmil
NMR fragment-based screening against the two PDZ do-mains of MDA-9
Descriptor: 4-BUTYL-1,2-DIPHENYL-PYRAZOLIDINE-3,5-DIONE, GLYCEROL, SULFATE ION, ...
Authors:Tang, H.
Deposit date:2022-11-01
Release date:2023-11-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:NMR fragment-based screening against the two PDZ do-mains of MDA-9
To Be Published
9IMP
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BU of 9imp by Molmil
The complex of PDZ3 and PBM
Descriptor: INSC spindle orientation adaptor protein, Partitioning defective 3 homolog
Authors:Huang, S.J.
Deposit date:2024-07-04
Release date:2024-09-11
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:mInsc coordinates Par3 and NuMA condensates for assembly of the spindle orientation machinery in asymmetric cell division.
Int.J.Biol.Macromol., 279, 2024
5VWK
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BU of 5vwk by Molmil
Crystal structure of human Scribble PDZ1:Beta-PIX complex
Descriptor: Beta-PIX, Protein scribble homolog, SULFATE ION
Authors:Lim, K.Y.B, Kvansakul, M.
Deposit date:2017-05-22
Release date:2017-11-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for the differential interaction of Scribble PDZ domains with the guanine nucleotide exchange factor beta-PIX.
J. Biol. Chem., 292, 2017
2BYG
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BU of 2byg by Molmil
2nd PDZ Domain of Discs Large Homologue 2
Descriptor: CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110
Authors:Elkins, J.M, Schoch, G.A, Smee, C.E.A, Berridge, G, Salah, E, Sundstrom, M, Edwards, A, Arrowsmith, C, Weigelt, J, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2005-08-01
Release date:2005-08-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of Pick1 and Other Pdz Domains Obtained with the Help of Self-Binding C-Terminal Extensions.
Protein Sci., 16, 2007
4UU5
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BU of 4uu5 by Molmil
CRYSTAL STRUCTURE OF THE PDZ DOMAIN OF PALS1 IN COMPLEX WITH THE CRB PEPTIDE
Descriptor: 2,2,4,4,6,6,8-heptamethylnonane, CHLORIDE ION, MAGUK P55 SUBFAMILY MEMBER 5, ...
Authors:Ivanova, M.E, Purkiss, A.G, McDonald, N.Q.
Deposit date:2014-07-24
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Structures of the human Pals1 PDZ domain with and without ligand suggest gated access of Crb to the PDZ peptide-binding groove.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
4UU6
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BU of 4uu6 by Molmil
CRYSTAL STRUCTURE OF THE PDZ DOMAIN OF PALS1
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Ivanova, M.E, Purkiss, A.G, McDonald, N.Q.
Deposit date:2014-07-24
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of the human Pals1 PDZ domain with and without ligand suggest gated access of Crb to the PDZ peptide-binding groove.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
1D5G
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BU of 1d5g by Molmil
SOLUTION STRUCTURE OF THE PDZ2 DOMAIN FROM HUMAN PHOSPHATASE HPTP1E COMPLEXED WITH A PEPTIDE
Descriptor: HUMAN PHOSPHATASE HPTP1E, PEPTIDE FADSEADENEQVSAV
Authors:Kozlov, G, Gehring, K, Ekiel, I.
Deposit date:1999-10-07
Release date:2002-07-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the PDZ2 Domain from Cytosolic Human Phosphatase hPTP1E Complexed with a Peptide Reveals Contribution of the beta2-beta3 Loop to PDZ Domain-Ligand Interactions
J.Mol.Biol., 320, 2002
8GI4
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BU of 8gi4 by Molmil
Crystal structure of human LIMK2 PDZ domain
Descriptor: LIM domain kinase 2
Authors:Casanova Sepulveda, G, Boggon, T.J.
Deposit date:2023-03-13
Release date:2023-12-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Autoregulation of the LIM kinases by their PDZ domain.
Nat Commun, 14, 2023
7VZE
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BU of 7vze by Molmil
Crystal structure of PTPN4 PDZ bound to the PBM of HPV16 E6
Descriptor: Tyrosine-protein phosphatase non-receptor type 4, the PDZ-binding motif of HPV16 E6
Authors:Lee, H.S, Yun, H.-Y, Ku, B.
Deposit date:2021-11-16
Release date:2022-03-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.882 Å)
Cite:Structural and biochemical analysis of the PTPN4 PDZ domain bound to the C-terminal tail of the human papillomavirus E6 oncoprotein.
J.Microbiol, 60, 2022
6NH9
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BU of 6nh9 by Molmil
Crystal structure of a human calcium/calmodulin dependent serine protein kinase (CASK) PDZ domain
Descriptor: Peripheral plasma membrane protein CASK
Authors:Sun, Y.J, Gakhar, L, Fuentes, E.J.
Deposit date:2018-12-21
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:CASK PDZ domain specificity
To be published
3CYY
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BU of 3cyy by Molmil
The crystal structure of ZO-1 PDZ2 in complex with the Cx43 peptide
Descriptor: Tight junction protein ZO-1, peptide from Gap junction alpha-1 protein
Authors:Pan, L, Zhang, M.
Deposit date:2008-04-27
Release date:2008-09-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Domain-swapped dimerization of ZO-1 PDZ2 generates specific and regulatory connexin43-binding sites
Embo J., 27, 2008
3CH8
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BU of 3ch8 by Molmil
The crystal structure of PDZ-Fibronectin fusion protein
Descriptor: C-terminal octapeptide from protein ARVCF, MAGNESIUM ION, fusion protein PDZ-Fibronectin,Fibronectin
Authors:Makabe, K, Huang, J, Koide, A, Koide, S.
Deposit date:2008-03-08
Release date:2009-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution.
J.Mol.Biol., 392, 2009
8HU2
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BU of 8hu2 by Molmil
Rattus Syntenin-1 PDZ domain with inhibitor
Descriptor: (2~{S})-2-(9~{H}-fluoren-9-ylmethoxycarbonylamino)-3-(4-oxidanylidene-5~{H}-pyrimidin-2-yl)propanoic acid, Syntenin-1
Authors:Heo, Y, Lee, J, Yun, J.H, Lee, W.
Deposit date:2022-12-22
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of STNPDZ with inhibitor at 1.60 Angstroms resolution.
To Be Published
5A2P
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BU of 5a2p by Molmil
THE COMPLEX STRUCTURE OF PDZ DOMAINS IN SYNTENIN-1 WITH 4L PEPTIDE
Descriptor: SYNDECAN-4, SYNTENIN-1
Authors:Yoo, J.H, Yun, J.H, Cho, H.S, Lee, W.
Deposit date:2015-05-21
Release date:2016-06-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:Titl the Complex Structure of Pdz Domains in Syntenin-1 with 4L Peptide
To be Published
5OAK
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BU of 5oak by Molmil
Structure of the dmPar3 PDZ1 domain in complex with the dmPar6 PBM
Descriptor: Bazooka, isoform C,LD29223p, GLYCEROL
Authors:Bruekner, S.R, Wiesner, S.
Deposit date:2017-06-22
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for the interaction between the cell polarity proteins Par3 and Par6.
Sci Signal, 11, 2018
6OV7
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BU of 6ov7 by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptide kCAL01
Descriptor: Golgi-associated PDZ and coiled-coil motif-containing protein, kCAL01 peptide
Authors:Gill, N.P, Madden, D.R.
Deposit date:2019-05-07
Release date:2019-11-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Computational Analysis of Energy Landscapes Reveals Dynamic Features That Contribute to Binding of Inhibitors to CFTR-Associated Ligand.
J.Phys.Chem.B, 123, 2019
8OEP
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BU of 8oep by Molmil
Crystal structure of the PTPN3 PDZ domain bound to the HPV18 E6 oncoprotein C-terminal peptide
Descriptor: Protein E6, SODIUM ION, Tyrosine-protein phosphatase non-receptor type 3
Authors:Genera, M, Colcombet-Cazenave, B, Croitoru, A, Raynal, B, Mechaly, A, Caillet, J, Haouz, A, Wolff, N, Caillet-Saguy, C.
Deposit date:2023-03-11
Release date:2023-05-10
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Interactions of the protein tyrosine phosphatase PTPN3 with viral and cellular partners through its PDZ domain: insights into structural determinants and phosphatase activity.
Front Mol Biosci, 10, 2023
5D13
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BU of 5d13 by Molmil
Third PDZ domain (PDZ3) of PSD-95 complexed with CFMOC-KKETEV peptide
Descriptor: CFMOC-KKETEV peptide, Disks large homolog 4
Authors:De, S, Spaller, M.R, Olson, R.
Deposit date:2015-08-03
Release date:2016-08-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Chemically-modified peptides as inhibitors of PDZ3 of PSD-95
to be published
3KZE
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BU of 3kze by Molmil
Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in Complex With SSRKEYYA Peptide
Descriptor: Synthetic Peptide, T-lymphoma invasion and metastasis-inducing protein 1
Authors:Shepherd, T.R, Fuentes, E.J.
Deposit date:2009-12-08
Release date:2010-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Tiam1 PDZ domain couples to Syndecan1 and promotes cell-matrix adhesion.
J.Mol.Biol., 398, 2010
1IU2
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BU of 1iu2 by Molmil
The first PDZ domain of PSD-95
Descriptor: PSD-95
Authors:Long, J.-F, Tochio, H, Wang, P, Sala, C, Niethammer, M, Sheng, M, Zhang, M.
Deposit date:2002-02-19
Release date:2003-03-11
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Supramodular structure and synergistic target binding of the N-terminal tandem PDZ domains of PSD-95
J.MOL.BIOL., 327, 2003
1RY4
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BU of 1ry4 by Molmil
NMR Structure of the CRIB-PDZ module of Par-6
Descriptor: CG5884-PA
Authors:Peterson, F.C, Penkert, R.R, Volkman, B.F, Prehoda, K.E.
Deposit date:2003-12-19
Release date:2004-03-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Cdc42 Regulates the Par-6 PDZ Domain through an Allosteric CRIB-PDZ Transition.
Mol.Cell, 13, 2004
1IHJ
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BU of 1ihj by Molmil
Crystal Structure of the N-terminal PDZ domain of InaD in complex with a NorpA C-terminal peptide
Descriptor: InaD, phospholipase C
Authors:Kimple, M.E, Siderovski, D.P, Sondek, J.
Deposit date:2001-04-19
Release date:2001-08-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Functional relevance of the disulfide-linked complex of the N-terminal PDZ domain of InaD with NorpA.
EMBO J., 20, 2001
3LNX
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BU of 3lnx by Molmil
Second PDZ domain from human PTP1E
Descriptor: IODIDE ION, THIOCYANATE ION, Tyrosine-protein phosphatase non-receptor type 13
Authors:Zhang, J, Chang, A, Ke, H, Phillips Jr, G.N, Lee, A.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-02-03
Release date:2010-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.642 Å)
Cite:Crystallographic and nuclear magnetic resonance evaluation of the impact of peptide binding to the second PDZ domain of protein tyrosine phosphatase 1E.
Biochemistry, 49, 2010
5E21
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BU of 5e21 by Molmil
PDZ2 of LNX2 at 277K,single conformer model
Descriptor: Ligand of Numb protein X 2
Authors:Hekstra, D.R, White, K.I, Socolich, M.A, Ranganathan, R.
Deposit date:2015-09-30
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.011 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
8BV7
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BU of 8bv7 by Molmil
Crystal structure of the Trichoplax Scribble PDZ1 domain in complex with the Trichoplax phosphorylated Vangl peptide
Descriptor: Leucine-rich repeat-containing protein 1, Vang-like protein 1
Authors:Maddumage, J.C, Kvansakul, M.
Deposit date:2022-12-02
Release date:2023-12-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Trichoplax Scribble PDZ1 domain in complex with Trichoplax the phosphorylated Vangl peptide
To Be Published

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數據於2024-11-13公開中

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