Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6PAC
DownloadVisualize
BU of 6pac by Molmil
E. coli L-asparaginase II in complex with L-Asp at pH 5.6
Descriptor: ASPARTIC ACID, IMIDAZOLE, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-06-11
Release date:2019-09-04
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase.
Protein Sci., 28, 2019
1LRN
DownloadVisualize
BU of 1lrn by Molmil
Aquifex aeolicus KDO8P synthase H185G mutant in complex with Cadmium
Descriptor: CADMIUM ION, KDO-8-phosphate synthetase, PHOSPHATE ION
Authors:Wang, J, Duewel, H.S, Stuckey, J.A, Woodard, R.W, Gatti, D.L.
Deposit date:2002-05-15
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Function of His185 in Aquifex aeolicus 3-Deoxy-D-manno-octulosonate 8-Phosphate Synthase
J.Mol.Biol., 324, 2002
3JTA
DownloadVisualize
BU of 3jta by Molmil
Structure of neuronal nitric oxide synthase heme domain in the ferrous state complexed with N~5~-[4-(methylsulfanyl)butanimidoyl]-L-ornithine
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, Nitric oxide synthase, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2009-09-11
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Heme-coordinating inhibitors of neuronal nitric oxide synthase. Iron-thioether coordination is stabilized by hydrophobic contacts without increased inhibitor potency.
J.Am.Chem.Soc., 132, 2010
2WOH
DownloadVisualize
BU of 2woh by Molmil
Strontium soaked E. coli copper amine oxidase
Descriptor: CALCIUM ION, COPPER (II) ION, PRIMARY AMINE OXIDASE, ...
Authors:Smith, M.A, Pirrat, P, Pearson, A.R, Knowles, P.F, Phillips, S.E.V, McPherson, M.J.
Deposit date:2009-07-23
Release date:2010-05-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Exploring the Roles of the Metal Ions in Escherichia Coli Copper Amine Oxidase.
Biochemistry, 49, 2010
2E82
DownloadVisualize
BU of 2e82 by Molmil
Crystal structure of human D-amino acid oxidase complexed with imino-DOPA
Descriptor: (2E)-3-(3,4-DIHYDROXYPHENYL)-2-IMINOPROPANOIC ACID, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kawazoe, T, Tsuge, H, Imagawa, T, Kuramitsu, S, Fukui, K.
Deposit date:2007-01-16
Release date:2007-03-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of d-DOPA oxidation by d-amino acid oxidase: Alternative pathway for dopamine biosynthesis.
Biochem.Biophys.Res.Commun., 355, 2007
8TRB
DownloadVisualize
BU of 8trb by Molmil
Cryo-EM structure of the rat P2X7 receptor in complex with the allosteric antagonist JNJ47965567
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GUANOSINE-5'-DIPHOSPHATE, N-{[4-(4-phenylpiperazin-1-yl)oxan-4-yl]methyl}-2-(phenylsulfanyl)pyridine-3-carboxamide, ...
Authors:Oken, A.C, Ditter, I.A, Lisi, N.E, Krishnamurthy, I, McCarthy, A.E, Godsey, M.H, Mansoor, S.E.
Deposit date:2023-08-09
Release date:2024-10-16
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:P2X 7 receptors exhibit at least three modes of allosteric antagonism.
Sci Adv, 10, 2024
8TRA
DownloadVisualize
BU of 8tra by Molmil
Cryo-EM structure of the rat P2X7 receptor in complex with the allosteric antagonist GSK1482160
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GUANOSINE-5'-DIPHOSPHATE, N-{[2-chloro-3-(trifluoromethyl)phenyl]methyl}-1-methyl-5-oxo-L-prolinamide, ...
Authors:Oken, A.C, Ditter, I.A, Lisi, N.E, Krishnamurthy, I, McCarthy, A.E, Godsey, M.H, Mansoor, S.E.
Deposit date:2023-08-09
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:P2X 7 receptors exhibit at least three modes of allosteric antagonism.
Sci Adv, 10, 2024
8TRK
DownloadVisualize
BU of 8trk by Molmil
Cryo-EM structure of the rat P2X7 receptor in complex with the allosteric antagonist methyl blue
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,4',4''-[methanetriyltris(4,1-phenyleneazanediyl)]tri(benzene-1-sulfonic acid), GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Oken, A.C, Ditter, I.A, Lisi, N.E, Krishnamurthy, I, McCarthy, A.E, Godsey, M.H, Mansoor, S.E.
Deposit date:2023-08-09
Release date:2024-10-16
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:P2X 7 receptors exhibit at least three modes of allosteric antagonism.
Sci Adv, 10, 2024
8TR7
DownloadVisualize
BU of 8tr7 by Molmil
Cryo-EM structure of the rat P2X7 receptor in complex with the allosteric antagonist A839977
Descriptor: (1P)-1-(2,3-dichlorophenyl)-N-({2-[(pyridin-2-yl)oxy]phenyl}methyl)-1H-tetrazol-5-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Oken, A.C, Ditter, I.A, Lisi, N.E, Krishnamurthy, I, McCarthy, A.E, Godsey, M.H, Mansoor, S.E.
Deposit date:2023-08-09
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:P2X 7 receptors exhibit at least three modes of allosteric antagonism.
Sci Adv, 10, 2024
8TR8
DownloadVisualize
BU of 8tr8 by Molmil
Cryo-EM structure of the rat P2X7 receptor in complex with the allosteric antagonist AZD9056
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GUANOSINE-5'-DIPHOSPHATE, N-{[(3s,5s,7s)-adamantan-1-yl]methyl}-2-chloro-5-{3-[(3-hydroxypropyl)amino]propyl}benzamide, ...
Authors:Oken, A.C, Ditter, I.A, Lisi, N.E, Krishnamurthy, I, McCarthy, A.E, Godsey, M.H, Mansoor, S.E.
Deposit date:2023-08-09
Release date:2024-10-16
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.21 Å)
Cite:P2X 7 receptors exhibit at least three modes of allosteric antagonism.
Sci Adv, 10, 2024
8TR6
DownloadVisualize
BU of 8tr6 by Molmil
Cryo-EM structure of the rat P2X7 receptor in complex with the allosteric antagonist A438079
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-{[(5R)-5-(2,3-dichlorophenyl)tetrazolidin-1-yl]methyl}pyridine, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Oken, A.C, Ditter, I.A, Lisi, N.E, Krishnamurthy, I, McCarthy, A.E, Godsey, M.H, Mansoor, S.E.
Deposit date:2023-08-09
Release date:2024-10-16
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.18 Å)
Cite:P2X 7 receptors exhibit at least three modes of allosteric antagonism.
Sci Adv, 10, 2024
1DDZ
DownloadVisualize
BU of 1ddz by Molmil
X-RAY STRUCTURE OF A BETA-CARBONIC ANHYDRASE FROM THE RED ALGA, PORPHYRIDIUM PURPUREUM R-1
Descriptor: CARBONIC ANHYDRASE, ZINC ION
Authors:Mitsuhashi, S, Mizushima, T, Yamashita, E, Miyachi, S, Tsukihara, T.
Deposit date:1999-11-12
Release date:2000-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structure of beta-carbonic anhydrase from the red alga, Porphyridium purpureum, reveals a novel catalytic site for CO(2) hydration.
J.Biol.Chem., 275, 2000
4E2Y
DownloadVisualize
BU of 4e2y by Molmil
X-ray Structure of the E224Q mutant of TcaB9, a C-3'-Methyltransferase, in Complex with S-Adenosyl-L-Homocysteine and Sugar Product
Descriptor: (2R,4S,6R)-4-amino-4,6-dimethyl-5-oxotetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name), S-ADENOSYL-L-HOMOCYSTEINE, TcaB9, ...
Authors:Bruender, N.A, Holden, H.M.
Deposit date:2012-03-09
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the catalytic mechanism of a C-3'-methyltransferase involved in the biosynthesis of D-tetronitrose.
Protein Sci., 21, 2012
5M96
DownloadVisualize
BU of 5m96 by Molmil
Synthesis and biological evaluation of new triazolo and imidazolopyridine RORgt inverse agonists
Descriptor: Nuclear receptor ROR-gamma, ~{N}-[8-[[(3~{S})-4-cyclopentylcarbonyl-3-methyl-piperazin-1-yl]methyl]-7-methyl-imidazo[1,2-a]pyridin-6-yl]-2-methyl-pyrimidine-5-carboxamide
Authors:Kallen, J.
Deposit date:2016-10-31
Release date:2016-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Synthesis and Biological Evaluation of New Triazolo- and Imidazolopyridine ROR gamma t Inverse Agonists.
ChemMedChem, 11, 2016
7MMZ
DownloadVisualize
BU of 7mmz by Molmil
Crystal Structure of Acetyl-coenzyme A synthetase from Legionella pneumophila Philadelphia 1 in complex with ethyl-AMP
Descriptor: 1,2-ETHANEDIOL, 5'-O-[(S)-ethoxy(hydroxy)phosphoryl]adenosine, Acetyl-coenzyme A synthetase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-04-30
Release date:2021-05-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Bacterial structural genomics target enabled by a recently discovered potent fungal acetyl-CoA synthetase inhibitor.
Acta Crystallogr.,Sect.F, 2023
1DLQ
DownloadVisualize
BU of 1dlq by Molmil
STRUCTURE OF CATECHOL 1,2-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 INHIBITED BY BOUND MERCURY
Descriptor: CATECHOL 1,2-DIOXYGENASE, FE (III) ION, MERCURY (II) ION, ...
Authors:Vetting, M.W, Ohlendorf, D.H.
Deposit date:1999-12-11
Release date:2000-05-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The 1.8 A crystal structure of catechol 1,2-dioxygenase reveals a novel hydrophobic helical zipper as a subunit linker.
Structure Fold.Des., 8, 2000
1DCP
DownloadVisualize
BU of 1dcp by Molmil
DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR, COMPLEXED WITH BIOPTERIN
Descriptor: 7,8-DIHYDROBIOPTERIN, DCOH
Authors:Cronk, J.D, Endrizzi, J.A, Alber, T.
Deposit date:1996-05-16
Release date:1996-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-resolution structures of the bifunctional enzyme and transcriptional coactivator DCoH and its complex with a product analogue.
Protein Sci., 5, 1996
3MAV
DownloadVisualize
BU of 3mav by Molmil
Crystal structure of Plasmodium vivax putative farnesyl pyrophosphate synthase (Pv092040)
Descriptor: Farnesyl pyrophosphate synthase, SULFATE ION
Authors:Dong, A, Dunford, J, Lew, J, Wernimont, A.K, Ren, H, Zhao, Y, Koeieradzki, I, Opperman, U, Sundstrom, M, Weigelt, J, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Hui, R, Artz, J.D, Structural Genomics Consortium (SGC)
Deposit date:2010-03-24
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular characterization of a novel geranylgeranyl pyrophosphate synthase from Plasmodium parasites.
J.Biol.Chem., 286, 2011
3JT9
DownloadVisualize
BU of 3jt9 by Molmil
Structure of neuronal nitric oxide synthase heme domain in the ferrous state complexed with N~5~-[2-(ethylsulfanyl)ethanimidoyl]-L-ornithine
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, Nitric oxide synthase, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2009-09-11
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Heme-coordinating inhibitors of neuronal nitric oxide synthase. Iron-thioether coordination is stabilized by hydrophobic contacts without increased inhibitor potency.
J.Am.Chem.Soc., 132, 2010
1LRO
DownloadVisualize
BU of 1lro by Molmil
Aquifex aeolicus KDO8P synthase H185G mutant in complex with PEP and Cadmium
Descriptor: CADMIUM ION, KDO-8-phosphate synthetase, PHOSPHATE ION, ...
Authors:Wang, J, Duewel, H.S, Stuckey, J.A, Woodard, R.W, Gatti, D.L.
Deposit date:2002-05-15
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Function of His185 in Aquifex aeolicus 3-Deoxy-D-manno-octulosonate 8-Phosphate Synthase
J.Mol.Biol., 324, 2002
2ZLA
DownloadVisualize
BU of 2zla by Molmil
2-Substituted-16-ene-22-thia-1alpha,25-dihydroxy-26,27-dimethyl-19-norvitamin D3 analogs: Synthesis, biological evaluation and crystal structure
Descriptor: (1R,2S,3R,5Z,7E)-17-{(1R)-1-[(2-ethyl-2-hydroxybutyl)sulfanyl]ethyl}-2-(2-hydroxyethoxy)-9,10-secoestra-5,7,16-triene-1,3-diol, Coactivator peptide DRIP, Vitamin D3 receptor
Authors:Shimizu, M, Miyamoto, Y, Nakabayashi, M, Masuno, H, Ikura, T, Ito, N.
Deposit date:2008-04-04
Release date:2008-06-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:2-Substituted-16-ene-22-thia-1alpha,25-dihydroxy-26,27-dimethyl-19-norvitamin D3 analogs: Synthesis, biological evaluation, and crystal structure
Bioorg.Med.Chem., 16, 2008
6PA8
DownloadVisualize
BU of 6pa8 by Molmil
ECAII(T89V,K162T) MUTANT IN COMPLEX WITH L-ASN AT PH 7.0
Descriptor: ASPARAGINE, CITRATE ANION, GLYCEROL, ...
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-06-11
Release date:2019-09-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase.
Protein Sci., 28, 2019
3JT5
DownloadVisualize
BU of 3jt5 by Molmil
Structure of neuronal nitric oxide synthase heme domain complexed with N~5~-[2-(ethylsulfanyl)ethanimidoyl]-L-ornithine
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, Nitric oxide synthase, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2009-09-11
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Heme-coordinating inhibitors of neuronal nitric oxide synthase. Iron-thioether coordination is stabilized by hydrophobic contacts without increased inhibitor potency.
J.Am.Chem.Soc., 132, 2010
4C34
DownloadVisualize
BU of 4c34 by Molmil
PKA-S6K1 Chimera with Staurosporine bound
Descriptor: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA, GLYCEROL, ...
Authors:Couty, S, Westwood, I.M, Kalusa, A, Cano, C, Travers, J, Boxall, K, Chow, C.L, Burns, S, Schmitt, J, Pickard, L, Barillari, C, McAndrew, P.C, Clarke, P.A, Linardopoulos, S, Griffin, R.J, Aherne, G.W, Raynaud, F.I, Workman, P, Jones, K, van Montfort, R.L.M.
Deposit date:2013-08-21
Release date:2013-10-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The discovery of potent ribosomal S6 kinase inhibitors by high-throughput screening and structure-guided drug design.
Oncotarget, 4, 2013
1DM1
DownloadVisualize
BU of 1dm1 by Molmil
2.0 A CRYSTAL STRUCTURE OF THE DOUBLE MUTANT H(E7)V, T(E10)R OF MYOGLOBIN FROM APLYSIA LIMACINA
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Federici, L, Savino, C, Musto, R, Travaglini-Allocatelli, C, Cutruzzola, F, Brunori, M.
Deposit date:1999-12-13
Release date:2000-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Engineering His(E7) affects the control of heme reactivity in Aplysia limacina myoglobin.
Biochem.Biophys.Res.Commun., 269, 2000

227344

數據於2024-11-13公開中

PDB statisticsPDBj update infoContact PDBjnumon