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3W1D
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BU of 3w1d by Molmil
Structure of a pressure sensitive YFP variant YFP-G3
Descriptor: Green Fluorescent protein
Authors:Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
Deposit date:2012-11-14
Release date:2013-10-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013
1JBZ
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BU of 1jbz by Molmil
CRYSTAL STRUCTURE ANALYSIS OF A DUAL-WAVELENGTH EMISSION GREEN FLUORESCENT PROTEIN VARIANT AT HIGH PH
Descriptor: 1,2-ETHANEDIOL, GREEN FLUORESCENT PROTEIN, MAGNESIUM ION
Authors:Hanson, G.T, McAnaney, T.B, Park, E.S, Rendell, M.E.P, Yarbrough, D.K, Chu, S, Xi, L, Boxer, S.G, Montrose, M.H, Remington, S.J.
Deposit date:2001-06-07
Release date:2003-01-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Green Fluorescent Protein Variants as Ratiometric Dual Emission pH Sensors. 1. Structural Characterization and Preliminary Application.
Biochemistry, 41, 2002
1JG4
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BU of 1jg4 by Molmil
Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-adenosylmethionine
Descriptor: S-ADENOSYLMETHIONINE, protein-L-isoaspartate O-methyltransferase
Authors:Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
Deposit date:2001-06-22
Release date:2001-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
3WC3
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BU of 3wc3 by Molmil
Crystal structure of endo-1,4-beta-glucanase from Eisenia fetida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CITRATE ANION, ...
Authors:Arimori, T, Tamada, T.
Deposit date:2013-05-24
Release date:2013-10-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of endo-1,4-beta-glucanase from Eisenia fetida
J.SYNCHROTRON RADIAT., 20, 2013
4MKH
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BU of 4mkh by Molmil
Crystal structure of a stable adenylate kinase variant AKv18
Descriptor: 1,2-ETHANEDIOL, Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ...
Authors:Moon, S, Bae, E.
Deposit date:2013-09-05
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:An integrated approach for thermal stabilization of a mesophilic adenylate kinase.
Proteins, 82, 2014
1YJ2
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BU of 1yj2 by Molmil
Cyclized, non-dehydrated post-translational product for S65A Y66S H148G GFP variant
Descriptor: 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-01-13
Release date:2005-02-15
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
5J2O
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BU of 5j2o by Molmil
Crystal structure of the cyan fluorescence protein Cerulean S175G mutant
Descriptor: Green fluorescent protein
Authors:Park, S.-W, Kang, S, Yoon, T.-S.
Deposit date:2016-03-29
Release date:2016-04-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the cyan fluorescent protein Cerulean-S175G
Acta Crystallogr.,Sect.F, 72, 2016
3KCS
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BU of 3kcs by Molmil
Crystal structure of PAmCherry1 in the dark state
Descriptor: PAmCherry1 protein
Authors:Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V.
Deposit date:2009-10-21
Release date:2009-11-17
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states.
Proc.Natl.Acad.Sci.USA, 106, 2009
3MNP
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BU of 3mnp by Molmil
Crystal structure of the agonist form of mouse glucocorticoid receptor stabilized by (A611V, V708A, E711G) mutations at 1.50A
Descriptor: DEXAMETHASONE, GLYCEROL, Glucocorticoid receptor, ...
Authors:Schoch, G.A, Seitz, T, Benz, J, Banner, D, Stihle, M, D'Arcy, B, Thoma, R, Sterner, R, Hennig, M, Ruf, A.
Deposit date:2010-04-22
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Enhancing the stability and solubility of the glucocorticoid receptor ligand-binding domain by high-throughput library screening.
J.Mol.Biol., 403, 2010
3DPX
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BU of 3dpx by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 5000 Atmospheres: Structure 26 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQ5
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BU of 3dq5 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1960 Atmospheres: Structure 19 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
7QGK
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BU of 7qgk by Molmil
The mRubyFT protein, Genetically Encoded Blue-to-Red Fluorescent Timer in its red state
Descriptor: MAGNESIUM ION, The red form of the mRubyFT protein, Genetically Encoded Blue-to-Red Fluorescent Timer
Authors:Boyko, K.M, Nikolaeva, A.Y, Gaivoronskii, F.A, Vlaskina, A.V, Subach, O.M, Popov, V.O, Subach, F.V.
Deposit date:2021-12-08
Release date:2022-03-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The mRubyFT Protein, Genetically Encoded Blue-to-Red Fluorescent Timer.
Int J Mol Sci, 23, 2022
5LU3
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BU of 5lu3 by Molmil
The Structure of Spirochaeta thermophila CBM64
Descriptor: 3,6,9,12,15-pentaoxaoctadecan-17-amine, 4-oxobutanoic acid, CALCIUM ION, ...
Authors:Correia, M.A.S, Romao, M.J, Carvalho, A.L.
Deposit date:2016-09-07
Release date:2017-02-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Stability and Ligand Promiscuity of Type A Carbohydrate-binding Modules Are Illustrated by the Structure of Spirochaeta thermophila StCBM64C.
J. Biol. Chem., 292, 2017
1KYR
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BU of 1kyr by Molmil
Crystal Structure of a Cu-bound Green Fluorescent Protein Zn Biosensor
Descriptor: COPPER (II) ION, Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-02-05
Release date:2002-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural chemistry of a green fluorescent protein Zn biosensor.
J.Am.Chem.Soc., 124, 2002
6G7P
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BU of 6g7p by Molmil
Trichodesmium Tery_3377 (IdiA) (FutA) with iron and water ligands.
Descriptor: CHLORIDE ION, Extracellular solute-binding protein, family 1, ...
Authors:Machelett, M.M, Tews, I.
Deposit date:2018-04-06
Release date:2018-09-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and functional characterization of IdiA/FutA (Tery_3377), an iron-binding protein from the ocean diazotrophTrichodesmium erythraeum.
J. Biol. Chem., 293, 2018
4P1Q
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BU of 4p1q by Molmil
GREEN FLUORESCENT PROTEIN E222H VARIANT
Descriptor: Green fluorescent protein, SODIUM ION
Authors:Klein, M, Carius, Y, Auerbach, D, Franz, S, Jung, G, Lancaster, C.R.D.
Deposit date:2014-02-27
Release date:2014-07-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Replacement of Highly Conserved E222 by the Photostable Non-photoconvertible Histidine in GFP.
Chembiochem, 15, 2014
1H6R
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BU of 1h6r by Molmil
The oxidized state of a redox sensitive variant of green fluorescent protein
Descriptor: CHLORIDE ION, GREEN FLUORESCENT PROTEIN
Authors:Ostergaard, H, Henriksen, A, Hansen, F.G, Winther, J.R.
Deposit date:2001-06-22
Release date:2001-11-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Shedding Light on Disulfide Bond Formation: Engineering a Redox Switch in Green Fluorescent Protein
Embo J., 20, 2001
6GP0
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BU of 6gp0 by Molmil
Structure of mEos4b in the red fluorescent state
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
5V6F
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BU of 5v6f by Molmil
Crystal Structure of the Second beta-Prism Domain of RbmC from V. cholerae bound to Mannotriose
Descriptor: Hemolysin-related protein, SULFATE ION, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose
Authors:De, S, Kaus, K, Sinclair, S, Case, B.C, Olson, R.
Deposit date:2017-03-16
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis of mammalian glycan targeting by Vibrio cholerae cytolysin and biofilm proteins.
PLoS Pathog., 14, 2018
1JG2
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BU of 1jg2 by Molmil
Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with adenosine
Descriptor: ADENOSINE, SODIUM ION, protein-L-isoaspartate O-methyltransferase
Authors:Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
Deposit date:2001-06-22
Release date:2001-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
1S6Z
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BU of 1s6z by Molmil
Enhanced Green Fluorescent Protein Containing the Y66L Substitution
Descriptor: CHLORIDE ION, green fluorescent protein
Authors:Rosenow, M.A, Huffman, H.A, Phail, M.E, Wachter, R.M.
Deposit date:2004-01-28
Release date:2004-05-04
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of the Y66L Variant of Green Fluorescent Protein Supports a Cyclization-Oxidation-Dehydration Mechanism for Chromophore Maturation(,).
Biochemistry, 43, 2004
1YHH
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BU of 1yhh by Molmil
Uncyclized precursor structure of S65A Y66S G67A GFP variant
Descriptor: green fluorescent protein
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-01-07
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
1Z1Q
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BU of 1z1q by Molmil
Y66L Variant of Enhanced Green Fluorescent Protein with 374-nm Absorbing Chromophore
Descriptor: Green Fluorescent Protein, SODIUM ION
Authors:Rosenow, M.A, Patel, H.N, Wachter, R.M.
Deposit date:2005-03-04
Release date:2005-06-21
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Oxidative Chemistry in the GFP Active Site Leads to Covalent Cross-Linking of a Modified Leucine Side Chain with a Histidine Imidazole: Implications for the Mechanism of Chromophore Formation.
Biochemistry, 44, 2005
3DQO
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BU of 3dqo by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1 Atmosphere Number 2: Structure 2 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2Y0G
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BU of 2y0g by Molmil
X-ray structure of Enhanced Green Fluorescent Protein (EGFP)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Royant, A, Noirclerc-Savoye, M.
Deposit date:2010-12-02
Release date:2011-04-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Stabilizing Role of Glutamic Acid 222 in the Structure of Enhanced Green Fluorescent Protein.
J.Struct.Biol., 174, 2011

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數據於2024-07-10公開中

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