PDB: 923 resultsInfo pagesStatus searchChemie searchBIRD

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7SF9	Branchiostoma Floridae Violet Fluorescent Protein Descriptor: Violet Fluorescent Protein Authors: Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L. Deposit date: 2021-10-03 Release date: 2022-03-30 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins. Protein Sci., 31, 2022
7SFA	Branchiostoma floridae fluorescent protein LanFP10A2 Descriptor: Fluorescent protein lanFP10A2 Authors: Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L. Deposit date: 2021-10-03 Release date: 2022-03-30 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.65 Å) Cite: A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins. Protein Sci., 31, 2022
7SAL	Crystal Structure of LaM6 Nanobody bound to mCherry Descriptor: GLYCEROL, LaM6, mCherry Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.93 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7SAI	Crystal Structure of Lag30 Nanobody bound to eGFP Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Green fluorescent protein, ... Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.23 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7SAH	Crystal Structure of LaG16 Nanobody bound to eGFP Descriptor: Green fluorescent protein, LaG16 Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.6 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7SAK	Crystal Structure of LaM4 Nanobody bound to mCherry Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, LaM4, ... Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.15 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7SAJ	Crystal Structure of LaM2 Nanobody bound to mCherry Descriptor: mCherry, nanobody LaM2 Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.37 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7PNN	mVenus released from fusion protein. Descriptor: CHLORIDE ION, mVenus Authors: Bloch, Y, Savvides, S.N. Deposit date: 2021-09-07 Release date: 2021-11-03 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.43 Å) Cite: mVenus released from fusion protein. To Be Published
7VCM	crystal structure of GINKO1 Descriptor: Green fluorescent protein,Potassium binding protein Kbp,Green fluorescent protein, POTASSIUM ION Authors: Wen, Y, Campbell, R.E, Lemieux, M.J. Deposit date: 2021-09-03 Release date: 2022-07-27 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.85 Å) Cite: A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life. Plos Biol., 20, 2022
7RY2	mSandy2 Descriptor: mSandy2 Authors: Chica, R.A, Legault, S, Thompson, M.C. Deposit date: 2021-08-24 Release date: 2022-01-26 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Generation of bright monomeric red fluorescent proteins via computational design of enhanced chromophore packing. Chem Sci, 13, 2022
7V7Z	Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form To Be Published
7V86	Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form To Be Published
7V8A	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Angiotensin-converting enzyme 2 (ACE2) ectodomain, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 2 To Be Published
7V82	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 1 To Be Published
7V81	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form To Be Published
7V80	Local refinement of SARS-CoV-2 S-Beta variant (B.1.351) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Local refinement of SARS-CoV-2 S-Beta variant (B.1.351) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain To Be Published
7V83	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 2 To Be Published
7V87	Local refinement of SARS-CoV-2 S-Kappa variant (B.1.617.1) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Angiotensin-converting enzyme 2 (ACE2) ectodomain, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Local refinement of SARS-CoV-2 S-Kappa variant (B.1.617.1) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain To Be Published
7V89	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Angiotensin-converting enzyme 2 (ACE2) ectodomain, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 1 To Be Published
7V85	Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form To Be Published
7V84	Local refinement of SARS-CoV-2 S-Gamma variant (P.1) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3 Å) Cite: Local refinement of SARS-CoV-2 S-Gamma variant (P.1) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain To Be Published
7V88	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Angiotensin-converting enzyme 2 (ACE2) ectodomain, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form To Be Published
7V8B	Local refinement of SARS-CoV-2 S-Delta variant (B.1.617.2) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Angiotensin-converting enzyme 2 (ACE2) ectodomain, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Local refinement of SARS-CoV-2 S-Delta variant (B.1.617.2) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain To Be Published
7PHR	Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, HLA class I histocompatibility antigen, ... Authors: Susac, L, Thomas, C, Tampe, R. Deposit date: 2021-08-18 Release date: 2022-08-31 Method: ELECTRON MICROSCOPY (3.08 Å) Cite: Structure of a fully assembled tumor-specific T cell receptor ligated by pMHC. Cell, 185, 2022
7RRH	Crystal structure of fast switching R66M/M159T mutant of fluorescent protein Dronpa (Dronpa2) Descriptor: Fluorescent protein Dronpa Authors: Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G. Deposit date: 2021-08-09 Release date: 2021-10-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.747 Å) Cite: Energetic Basis and Design of Enzyme Function Demonstrated Using GFP, an Excited-State Enzyme. J.Am.Chem.Soc., 144, 2022

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