PDB: 72372 resultsInfo pagesStatus searchChemie searchBIRD

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7DXR	Crystal structure of the mk2h peptide homodimer. Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, SULFATE ION, mk2h protein Authors: Yagi, S, Tagami, S. Deposit date: 2021-01-20 Release date: 2021-09-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DXT	Crystal structure of the chemically synthesized mk2h peptide homodimer Descriptor: mk2h protein Authors: Yagi, S, Tagami, S. Deposit date: 2021-01-20 Release date: 2021-09-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DYC	Crystal structure of the chemically synthesized mk2h_deltaMILPYS peptide homodimer in complex with malate Descriptor: (2S)-2-hydroxybutanedioic acid, D-MALATE, mk2h_deltaMILPYS protein Authors: Yagi, S, Tagami, S. Deposit date: 2021-01-21 Release date: 2021-09-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DXV	Crystal structure of the mk2h_deltaY peptide homodimer Descriptor: mk2h_dY protein Authors: Yagi, S, Tagami, S. Deposit date: 2021-01-20 Release date: 2021-09-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.301 Å) Cite: Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DXU	Crystal structure of the mk2h_deltaP peptide homodimer Descriptor: SULFATE ION, mk2h_dP protein Authors: Yagi, S, Tagami, S. Deposit date: 2021-01-20 Release date: 2021-09-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.314 Å) Cite: Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DXY	Crystal structure of the chemically synthesized mk2h_deltaMILPS peptide homodimer Descriptor: mk2h_deltaMILPS Authors: Yagi, S, Tagami, S. Deposit date: 2021-01-20 Release date: 2021-09-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
7DXS	Crystal structure of the ap1h peptide homodimer. Descriptor: SULFATE ION, ap1h protein Authors: Yagi, S, Tagami, S. Deposit date: 2021-01-20 Release date: 2021-09-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.102 Å) Cite: Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc., 143, 2021
3OCQ	crystal structure of tRNA-specific Adenosine deaminase from Salmonella enterica Descriptor: Putative Cytosine/adenosine deaminase, ZINC ION Authors: Kim, J, Ramagopal, U.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2010-08-10 Release date: 2010-08-18 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Crystal structure of tRNA-specific Adenosine deaminase from Salmonella enterica To be Published
3SKL	Crystal structure of the 2'- deoxyguanosine riboswitch bound to 2'-deoxyguanosine, iridium hexammine soak Descriptor: 2'-DEOXY-GUANOSINE, IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ... Authors: Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A. Deposit date: 2011-06-22 Release date: 2011-08-17 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch. Nat.Chem.Biol., 7, 2011
3SKR	Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cobalt Hexammine soak Descriptor: 2'-DEOXY-GUANOSINE, COBALT HEXAMMINE(III), MAGNESIUM ION, ... Authors: Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A. Deposit date: 2011-06-23 Release date: 2011-08-17 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch. Nat.Chem.Biol., 7, 2011
3NEJ	Q28E mutant of Hera RNA helicase N-terminal domain - perfectly twinned hexagonal form Descriptor: Heat resistant RNA dependent ATPase Authors: Rudolph, M.G. Deposit date: 2010-06-09 Release date: 2011-04-27 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.57 Å) Cite: Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop. Biol.Chem., 392, 2011
1X8W	Structure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active Site Descriptor: MAGNESIUM ION, Tetrahymena ribozyme RNA Authors: Guo, F, Gooding, A.R, Cech, T.R. Deposit date: 2004-08-18 Release date: 2004-11-09 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3.8 Å) Cite: Structure of the Tetrahymena ribozyme: base triple sandwich and metal ion at the active site. Mol.Cell, 16, 2004
6N9A	Crystal Structure of Thermotoga maritima threonylcarbamoyladenosine biosynthesis complex TsaB2D2E2 bound to ATP and carboxy-AMP Descriptor: 2-(2-ETHOXYETHOXY)ETHANOL, 5'-O-[(R)-(carboxyoxy)(hydroxy)phosphoryl]adenosine, ADENOSINE-5'-DIPHOSPHATE, ... Authors: Swairjo, M.A, Stec, B. Deposit date: 2018-12-01 Release date: 2019-05-22 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Conformational communication mediates the reset step in t6A biosynthesis. Nucleic Acids Res., 47, 2019
3SLM	Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'-deoxyguanosine-5'-monophosphate Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, RNA (68-MER), ... Authors: Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.A. Deposit date: 2011-06-24 Release date: 2011-08-17 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch. Nat.Chem.Biol., 7, 2011
2GSP	RIBONUCLEASE T1/2',3'-CGPS AND 3'-GMP, 2 DAYS Descriptor: CALCIUM ION, GUANOSINE-2',3'-CYCLOPHOSPHOROTHIOATE, GUANOSINE-3'-MONOPHOSPHATE, ... Authors: Zegers, I, Wyns, L. Deposit date: 1997-12-02 Release date: 1998-08-12 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Hydrolysis of a slow cyclic thiophosphate substrate of RNase T1 analyzed by time-resolved crystallography. Nat.Struct.Biol., 5, 1998
4BL7	Crystal structure of the AIMP3-MRS N-terminal domain complex in different space group Descriptor: EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON-1, METHIONINE--TRNA LIGASE, CYTOPLASMIC Authors: Cho, H.Y, Seo, W.W, Cho, H.J, Kang, B.S. Deposit date: 2013-05-02 Release date: 2014-05-21 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.892 Å) Cite: Crystal Structure of the Aimp3-Mrs N-Terminal Domain Complex in Different Space Group To be Published
3QCR	Incomplete structural model of a human telomeric DNA quadruplex-acridine complex. Descriptor: Human telomeric repeat deoxyribonucleic acid, N,N'-[acridine-3,6-diylbis(1H-1,2,3-triazole-1,4-diylbenzene-3,1-diyl)]bis[3-(diethylamino)propanamide], POTASSIUM ION Authors: Collie, G.W, Neidle, S, Parkinson, G.N. Deposit date: 2011-01-17 Release date: 2011-02-16 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural basis of telomeric RNA quadruplex-acridine ligand recognition. J.Am.Chem.Soc., 133, 2011
4BVY	Crystal structure of the AIMP3-MRS N-terminal domain complex Descriptor: EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON-1, METHIONINE--TRNA LIGASE, CYTOPLASMIC Authors: Cho, H.Y, Seo, W.W, Cho, H.J, Kang, B.S. Deposit date: 2013-06-29 Release date: 2014-07-16 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.992 Å) Cite: Crystal Structure of the Aimp3-Mrs N-Terminal Domain Complex To be Published
8DFL	Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation) Descriptor: Nanobody A0194009G09, POTASSIUM ION, Potassium voltage-gated channel subfamily A member 3,Green fluorescent protein fusion Authors: Meyerson, J.R, Selvakumar, P. Deposit date: 2022-06-22 Release date: 2022-07-13 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.25 Å) Cite: Structures of the T cell potassium channel Kv1.3 with immunoglobulin modulators. Nat Commun, 13, 2022
1RHL	RIBONUCLEASE T1 COMPLEXED WITH 2'GMP/G23A MUTANT Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, PROTEIN (RIBONUCLEASE T1) Authors: Huyghues-Despointes, B.M.P, Langhorst, U, Steyaert, J, Pace, C.N, Scholtz, J.M. Deposit date: 1998-10-09 Release date: 1998-10-14 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Hydrogen-exchange stabilities of RNase T1 and variants with buried and solvent-exposed Ala --> Gly mutations in the helix. Biochemistry, 38, 1999
3E2B	Crystal structure of Dynein Light chain LC8 in complex with a peptide derived from Swallow Descriptor: ACETATE ION, Dynein light chain 1, cytoplasmic, ... Authors: Benison, G, Barbar, E, Karplus, P.A. Deposit date: 2008-08-05 Release date: 2008-08-12 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2 Å) Cite: The interplay of ligand binding and quaternary structure in the diverse interactions of dynein light chain LC8. J.Mol.Biol., 384, 2008
2DO4	Solution structure of the RNA binding domain of squamous cell carcinoma antigen recognized by T cells 3 Descriptor: Squamous cell carcinoma antigen recognized by T-cells 3 Authors: Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-04-27 Release date: 2007-04-17 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the RNA binding domain of squamous cell carcinoma antigen recognized by T cells 3 To be Published
1WHW	Solution structure of the N-terminal RNA binding domain from hypothetical protein BAB23448 Descriptor: hypothetical protein RIKEN CDNA 1200009A02 Authors: Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2004-05-28 Release date: 2004-11-28 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the N-terminal RNA binding domain from hypothetical protein BAB23448 To be Published
1WHX	Solution structure of the second RNA binding domain from hypothetical protein BAB23448 Descriptor: hypothetical protein RIKEN CDNA 1200009A02 Authors: Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2004-05-28 Release date: 2004-11-28 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the second RNA binding domain from hypothetical protein BAB23448 To be Published
1YLS	Crystal structure of selenium-modified Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene Descriptor: (3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1',2']-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE, MAGNESIUM ION, RNA Diels-Alder ribozyme Authors: Serganov, A, Keiper, S, Malinina, L, Tereshko, V, Skripkin, E, Hobartner, C, Polonskaia, A, Phan, A.T, Wombacher, R, Micura, R, Dauter, Z, Jaschke, A, Patel, D.J. Deposit date: 2005-01-19 Release date: 2005-02-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation. Nat.Struct.Mol.Biol., 12, 2005

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